More than 300 homologs were found in PanDaTox collection
for query gene Sked_02100 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013521  Sked_02100  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  100 
 
 
308 aa  588  1e-167  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4504  binding-protein-dependent transport systems inner membrane component  75.89 
 
 
281 aa  369  1e-101  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2627  binding-protein-dependent transport systems inner membrane component  56.6 
 
 
288 aa  277  2e-73  Actinosynnema mirum DSM 43827  Bacteria  normal  0.752734  n/a   
 
 
-
 
NC_009664  Krad_3112  binding-protein-dependent transport systems inner membrane component  60.16 
 
 
253 aa  270  2.9999999999999997e-71  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0371548 
 
 
-
 
NC_010511  M446_0770  binding-protein-dependent transport systems inner membrane component  34.02 
 
 
273 aa  140  3e-32  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  33.06 
 
 
273 aa  138  1e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_3753  binding-protein-dependent transport systems inner membrane component  33.8 
 
 
268 aa  138  1e-31  Jannaschia sp. CCS1  Bacteria  normal  0.333865  normal 
 
 
-
 
NC_009485  BBta_1169  putative ABC transporter permease protein  33.78 
 
 
279 aa  137  2e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3131  binding-protein-dependent transport systems inner membrane component  32.01 
 
 
281 aa  134  1.9999999999999998e-30  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4254  binding-protein-dependent transport systems inner membrane component  31.1 
 
 
283 aa  131  1.0000000000000001e-29  Conexibacter woesei DSM 14684  Bacteria  normal  0.0441349  normal  0.902161 
 
 
-
 
NC_012791  Vapar_1862  binding-protein-dependent transport systems inner membrane component  33.48 
 
 
257 aa  130  3e-29  Variovorax paradoxus S110  Bacteria  normal  0.116723  n/a   
 
 
-
 
NC_013739  Cwoe_3810  binding-protein-dependent transport systems inner membrane component  32.27 
 
 
258 aa  128  2.0000000000000002e-28  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.42897 
 
 
-
 
NC_007953  Bxe_C0801  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  33.68 
 
 
298 aa  127  3e-28  Burkholderia xenovorans LB400  Bacteria  normal  0.0745387  normal 
 
 
-
 
NC_008786  Veis_0620  binding-protein-dependent transport systems inner membrane component  32.58 
 
 
254 aa  127  3e-28  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.63161  normal 
 
 
-
 
NC_003909  BCE_0797  ABC transporter, permease protein, putative  33.18 
 
 
250 aa  125  7e-28  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4547  putative ABC transporter, permease protein  32.74 
 
 
251 aa  125  7e-28  Bacillus cereus G9842  Bacteria  normal  0.113137  normal  0.441246 
 
 
-
 
NC_009719  Plav_0891  binding-protein-dependent transport systems inner membrane component  36.32 
 
 
268 aa  125  9e-28  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.223421 
 
 
-
 
NC_011658  BCAH187_A0881  putative ABC transporter, permease protein  33.18 
 
 
251 aa  125  9e-28  Bacillus cereus AH187  Bacteria  hitchhiker  0.00328051  n/a   
 
 
-
 
NC_009674  Bcer98_0614  binding-protein-dependent transport systems inner membrane component  31.39 
 
 
250 aa  125  9e-28  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0637  ABC transporter, permease  33.33 
 
 
250 aa  124  1e-27  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013515  Smon_0476  binding-protein-dependent transport systems inner membrane component  29.29 
 
 
249 aa  125  1e-27  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_005945  BAS0693  ABC transporter permease  33.33 
 
 
250 aa  124  2e-27  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0637  ABC transporter, permease  33.33 
 
 
250 aa  124  2e-27  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00537874  n/a   
 
 
-
 
NC_011773  BCAH820_0804  putative ABC transporter, permease protein  33.18 
 
 
250 aa  124  2e-27  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.22036e-46 
 
 
-
 
NC_007530  GBAA_0727  ABC transporter permease  33.33 
 
 
250 aa  124  2e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0363276  n/a   
 
 
-
 
NC_011988  Avi_5406  ABC transporter membrane spanning protein  35.57 
 
 
251 aa  123  4e-27  Agrobacterium vitis S4  Bacteria  normal  0.408693  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0643  binding-protein-dependent transport systems inner membrane component  32.29 
 
 
251 aa  123  5e-27  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  35.14 
 
 
261 aa  122  6e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_008786  Veis_3506  binding-protein-dependent transport systems inner membrane component  34.58 
 
 
282 aa  122  9e-27  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0528385  normal  0.0939424 
 
 
-
 
NC_008044  TM1040_1494  binding-protein-dependent transport systems inner membrane component  36.27 
 
 
281 aa  120  1.9999999999999998e-26  Ruegeria sp. TM1040  Bacteria  normal  0.58323  normal 
 
 
-
 
NC_011725  BCB4264_A0784  putative ABC transporter, permease protein  31.84 
 
 
250 aa  120  1.9999999999999998e-26  Bacillus cereus B4264  Bacteria  normal  0.605831  n/a   
 
 
-
 
NC_011365  Gdia_3269  binding-protein-dependent transport systems inner membrane component  35.87 
 
 
253 aa  120  3.9999999999999996e-26  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.283078  normal 
 
 
-
 
NC_009668  Oant_3871  binding-protein-dependent transport systems inner membrane component  30.53 
 
 
280 aa  119  4.9999999999999996e-26  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.208081  n/a   
 
 
-
 
NC_013525  Tter_1221  binding-protein-dependent transport systems inner membrane component  33.51 
 
 
246 aa  119  6e-26  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010524  Lcho_1095  binding-protein-dependent transport systems inner membrane component  30.36 
 
 
255 aa  118  9.999999999999999e-26  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008254  Meso_2046  binding-protein-dependent transport systems inner membrane component  32.74 
 
 
286 aa  118  9.999999999999999e-26  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2116  binding-protein-dependent transport systems inner membrane component  28.33 
 
 
253 aa  118  9.999999999999999e-26  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1140  binding-protein-dependent transport systems inner membrane component  29.78 
 
 
255 aa  117  3e-25  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4527  binding-protein-dependent transport systems inner membrane component  44.58 
 
 
253 aa  117  3.9999999999999997e-25  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3210  ABC transporter, permease protein  36.89 
 
 
267 aa  116  5e-25  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_6052  binding-protein-dependent transport systems inner membrane component  30.38 
 
 
274 aa  116  5e-25  Variovorax paradoxus S110  Bacteria  normal  0.0454164  n/a   
 
 
-
 
NC_013946  Mrub_1076  ABC transporter-like protein  32.89 
 
 
488 aa  116  5e-25  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.276573 
 
 
-
 
NC_013946  Mrub_1393  binding-protein-dependent transport systems inner membrane component  32.67 
 
 
254 aa  116  5e-25  Meiothermus ruber DSM 1279  Bacteria  normal  0.302994  normal  0.157809 
 
 
-
 
NC_009524  PsycPRwf_1445  binding-protein-dependent transport systems inner membrane component  29.96 
 
 
259 aa  115  6.9999999999999995e-25  Psychrobacter sp. PRwf-1  Bacteria  normal  normal  0.318112 
 
 
-
 
NC_007973  Rmet_0394  binding-protein-dependent transport systems inner membrane component  31.19 
 
 
259 aa  115  7.999999999999999e-25  Cupriavidus metallidurans CH34  Bacteria  normal  hitchhiker  0.00657833 
 
 
-
 
NC_009921  Franean1_4522  binding-protein-dependent transport systems inner membrane component  34.8 
 
 
329 aa  115  1.0000000000000001e-24  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3093  binding-protein dependent transport system inner membrane protein  33.33 
 
 
259 aa  115  1.0000000000000001e-24  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.942666 
 
 
-
 
NC_011369  Rleg2_3645  binding-protein-dependent transport systems inner membrane component  33.16 
 
 
268 aa  115  1.0000000000000001e-24  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_1625  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
285 aa  115  1.0000000000000001e-24  Trichodesmium erythraeum IMS101  Bacteria  normal  0.0792607  normal  0.95709 
 
 
-
 
NC_008752  Aave_1091  binding-protein-dependent transport systems inner membrane component  29.43 
 
 
258 aa  115  1.0000000000000001e-24  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0347556  normal 
 
 
-
 
NC_008786  Veis_2127  binding-protein-dependent transport systems inner membrane component  30.22 
 
 
255 aa  114  1.0000000000000001e-24  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.427162 
 
 
-
 
NC_010501  PputW619_2588  binding-protein-dependent transport systems inner membrane component  36 
 
 
267 aa  114  2.0000000000000002e-24  Pseudomonas putida W619  Bacteria  normal  normal  0.417353 
 
 
-
 
NC_009654  Mmwyl1_2703  binding-protein-dependent transport systems inner membrane component  31.65 
 
 
263 aa  114  2.0000000000000002e-24  Marinomonas sp. MWYL1  Bacteria  normal  0.88688  normal 
 
 
-
 
NC_009523  RoseRS_0669  binding-protein-dependent transport systems inner membrane component  34.05 
 
 
272 aa  114  2.0000000000000002e-24  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0848141 
 
 
-
 
NC_013165  Shel_13670  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  31.08 
 
 
249 aa  114  2.0000000000000002e-24  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2015  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  34.15 
 
 
252 aa  114  2.0000000000000002e-24  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2084  binding-protein-dependent transport systems inner membrane component  38.75 
 
 
260 aa  113  3e-24  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.566245  n/a   
 
 
-
 
NC_012850  Rleg_3297  binding-protein-dependent transport systems inner membrane component  32.29 
 
 
375 aa  113  4.0000000000000004e-24  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.149558 
 
 
-
 
NC_008025  Dgeo_0111  ABC transporter related  34.7 
 
 
493 aa  113  5e-24  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_3116  binding-protein-dependent transport systems inner membrane component  32.76 
 
 
272 aa  113  5e-24  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.025765  normal 
 
 
-
 
NC_011757  Mchl_2038  binding-protein-dependent transport systems inner membrane component  33.19 
 
 
264 aa  112  6e-24  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.697058  normal  0.743835 
 
 
-
 
NC_010172  Mext_1719  binding-protein-dependent transport systems inner membrane component  33.19 
 
 
264 aa  112  7.000000000000001e-24  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_1373  binding-protein-dependent transport systems inner membrane component  32.74 
 
 
303 aa  112  7.000000000000001e-24  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.674946  normal  0.833857 
 
 
-
 
NC_012852  Rleg_6281  binding-protein-dependent transport systems inner membrane component  34.51 
 
 
256 aa  112  8.000000000000001e-24  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.783663  normal 
 
 
-
 
NC_011369  Rleg2_3042  binding-protein-dependent transport systems inner membrane component  31.39 
 
 
375 aa  112  9e-24  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_0259  binding-protein-dependent transport systems inner membrane component  32.12 
 
 
453 aa  111  2.0000000000000002e-23  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_3035  binding-protein-dependent transport systems inner membrane component  32.54 
 
 
256 aa  110  2.0000000000000002e-23  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_3961  binding-protein-dependent transport systems inner membrane component  28.57 
 
 
256 aa  110  2.0000000000000002e-23  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_2545  binding-protein-dependent transport system protein  26.91 
 
 
287 aa  110  2.0000000000000002e-23  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.240068  normal  0.521676 
 
 
-
 
NC_013525  Tter_0403  binding-protein-dependent transport systems inner membrane component  29.75 
 
 
271 aa  110  2.0000000000000002e-23  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_000865  hydroxymethylpyrimidine ABC transporter transmembrane component  31.51 
 
 
266 aa  111  2.0000000000000002e-23  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_3205  binding-protein-dependent transport systems inner membrane component  28.63 
 
 
265 aa  111  2.0000000000000002e-23  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.000457845  n/a   
 
 
-
 
NC_009667  Oant_0344  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
286 aa  110  3e-23  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.113814  n/a   
 
 
-
 
NC_010623  Bphy_3181  binding-protein-dependent transport systems inner membrane component  33.53 
 
 
277 aa  110  3e-23  Burkholderia phymatum STM815  Bacteria  normal  0.0283642  normal 
 
 
-
 
NC_011989  Avi_3460  ABC transporter membrane spanning protein  34.69 
 
 
288 aa  110  3e-23  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_0391  binding-protein-dependent transport systems inner membrane component  30.18 
 
 
257 aa  110  3e-23  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_009669  Oant_4580  binding-protein-dependent transport systems inner membrane component  33.03 
 
 
257 aa  110  4.0000000000000004e-23  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1095  binding-protein-dependent transport systems inner membrane component  33.82 
 
 
264 aa  110  4.0000000000000004e-23  Methylobacterium populi BJ001  Bacteria  normal  0.0240883  normal  0.166534 
 
 
-
 
NC_009784  VIBHAR_06840  ABC-type nitrate/sulfonate/bicarbonate transport system permease component  31.05 
 
 
266 aa  110  4.0000000000000004e-23  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011725  BCB4264_A0446  putative ABC transporter, permease protein  32.43 
 
 
257 aa  109  5e-23  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3118  binding-protein dependent transport system inner membrane protein  31.82 
 
 
284 aa  109  5e-23  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4760  binding-protein-dependent transport systems inner membrane component  31.98 
 
 
267 aa  109  5e-23  Variovorax paradoxus S110  Bacteria  normal  0.318809  n/a   
 
 
-
 
NC_011772  BCG9842_B4878  putative ABC transporter, permease protein  31.9 
 
 
255 aa  109  5e-23  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_1488  binding-protein-dependent transport systems inner membrane component  34.96 
 
 
247 aa  109  6e-23  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS0367  ABC transporter permease  31.9 
 
 
265 aa  109  7.000000000000001e-23  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0357  ABC transporter, permease  31.9 
 
 
265 aa  109  7.000000000000001e-23  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0354  ABC transporter, permease  31.89 
 
 
265 aa  109  7.000000000000001e-23  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0491  ABC transporter, permease protein, putative  32.43 
 
 
257 aa  108  8.000000000000001e-23  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0381  ABC transporter permease  31.9 
 
 
257 aa  108  8.000000000000001e-23  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0424  putative ABC transporter, permease protein  31.9 
 
 
257 aa  108  8.000000000000001e-23  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011658  BCAH187_A0493  putative ABC transporter, permease protein  32.43 
 
 
257 aa  108  9.000000000000001e-23  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_5134  binding-protein-dependent transport systems inner membrane component  30.17 
 
 
294 aa  108  9.000000000000001e-23  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6031  putative ABC transporter, permease protein  33.51 
 
 
325 aa  108  1e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0666  binding-protein-dependent transport systems inner membrane component  32.06 
 
 
272 aa  108  1e-22  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_1464  binding-protein-dependent transport systems inner membrane component  35.63 
 
 
287 aa  108  1e-22  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_3877  binding-protein-dependent transport systems inner membrane component  31.4 
 
 
282 aa  108  1e-22  Salinispora tropica CNB-440  Bacteria  normal  0.901388  normal 
 
 
-
 
NC_009952  Dshi_1382  binding-protein-dependent transport systems inner membrane component  31.41 
 
 
285 aa  107  2e-22  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.13305  normal 
 
 
-
 
NC_010184  BcerKBAB4_0362  binding-protein-dependent transport systems inner membrane component  31.43 
 
 
255 aa  107  2e-22  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_1260  binding-protein-dependent transport systems inner membrane component  37.67 
 
 
252 aa  107  2e-22  Caulobacter sp. K31  Bacteria  normal  0.21476  normal  0.0147088 
 
 
-
 
NC_011313  VSAL_II0488  putative binding protein-dependent transport system, membrane component  32.78 
 
 
272 aa  107  3e-22  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.970837  n/a   
 
 
-
 
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