Gene PP_3210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3210 
Symbol 
ID1046858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3643240 
End bp3644043 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content64% 
IMG OID637146632 
ProductABC transporter, permease protein 
Protein accessionNP_745354 
Protein GI26989929 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGAC CCTCTACTCC CTGGCTACGC CATCCTTCTG TACTACGCAT CGTTTCACCA 
CTACTGGTTG GCGCCTTGCT GCTCGGCGTC TGGCAACTGG CATGCATCGC CTGGAAAGTC
CCGGTGTACC TGGTACCGTC ACCAGCCGAT ATCGGCCGCA CCCTGGTCGC CGATGGCCCG
ATGCTGCTGG GGGCACTGTG GATGACCCTG AAGATCACCT TCCTGTCATT CGCCCTCGCC
GTGGTCATCG GCACGCTGGC GGCGTTCGTG TTCGTGCAGA GCCGCGTCGT GGAGGCCAGT
CTGTTTCCCT ATGCGATCCT GCTGCAGGTA ACGCCGGTGG TGGCCATCGC GCCGCTGATC
ATCATCTGGT GCAGCGACAC GACCTTGGCG TTGGTGATCT GCGCCACGCT GGTGGCGATC
TTCCCGATCA TCGCCAACAC CGTCCTGGGC CTGCGCAGCG TCAACCCTGG CCTGCTCAAC
CTGTTCCATC TGAACCGCGC CAGCCGCTGG CAAGTGCTGT TGCGCCTGCG CATTCCCAGC
GCCTTACCGT GCTTTTTCGC TGGCCTGCGC ATCGCCAGCG GCTTGGCCTT GATCGGCGCG
GTGGTGGCCG AGTTCGTCGC CGGTACGGGC GGCACGGGTG CGGGCCTGGC GTATCAGATC
CTGCAAGCGG GATTCCAGCT CAACATCCCC CGCCTATTCG CCGCCCTGGT GTTGATCGCC
CTGACTGGCG TGGCGCTGTT CAGCCTGATG GCTTTGCTGG CTCGGTTGAG CCTGCGCCAC
TGGCACGAAA GCGAACTGGG CTGA
 
Protein sequence
MSRPSTPWLR HPSVLRIVSP LLVGALLLGV WQLACIAWKV PVYLVPSPAD IGRTLVADGP 
MLLGALWMTL KITFLSFALA VVIGTLAAFV FVQSRVVEAS LFPYAILLQV TPVVAIAPLI
IIWCSDTTLA LVICATLVAI FPIIANTVLG LRSVNPGLLN LFHLNRASRW QVLLRLRIPS
ALPCFFAGLR IASGLALIGA VVAEFVAGTG GTGAGLAYQI LQAGFQLNIP RLFAALVLIA
LTGVALFSLM ALLARLSLRH WHESELG