Gene Daci_4527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4527 
Symbol 
ID5750115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4978154 
End bp4978915 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content70% 
IMG OID641299628 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001565541 
Protein GI160899959 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTGT CCTTGTTCCA TGCCCGCCTG CTGGCCGCCG CGCTGGCGCT GGTCCTGCTG 
GGCCTGTGGG AGCTGCTGGT GCGGCAATGG GGCCTGTCCG CCCTGGTGCT GCCGGCGCCC
TCGGCCATTG CGGCATCGCT GTGGACGGGG CTGGCCACGG GCTATTTCTG GCCGCACATC
CGGGCGACGC TCCAGGCCCT GCTGCTGGGG CTGGCGGCCG GCAGCGCGAT CGGCCTGCTG
GCAGGCATGG CCCTGGCTGA ATCCGAGTTG CTCGAGCGTG TGCTCAAGCC CTATGTGGTG
GTCAGCCAGG TCGTGCCCAA GCTGGCGCTG GCGCCGCTGT TCGTGCTGTG GTTCGGCTTC
GGCATGCTGC CCACGGTGCT GATCACGGCG CTGATCTGCT TTTTCCCGCT GATGGAAAAC
ACCCTGACCG GCCTGCGCCA GGTCGATGCC CAGCGGCTGC AGCTGTTTCG CATGCTGGGC
GCCACGCGGC TGCAGACGCT GCTGCGCCTG AAGCTGCCCA CGGGCCTGCC CGCCATTCTT
GCGGGCCTGC GCGTGGCCGT GGTGCTGGCC CTGGTCGGCG CCGTGGTGGC CGAATTCATG
GGCGCCAGCC GCGGCCTGGG CGCCGTGGTC ATTGCCGCCC AGGGAATGAT GGACACCACC
CTCATGTTTG CGGCCCTGGT GCTGATCGCC GCCATGGGCC TGCTGCTGTA CCAGGCCTGC
CTGGTGCTGG AGCGCCGGCT GCTGCGCTCG CGCGCCGCCT GA
 
Protein sequence
MTVSLFHARL LAAALALVLL GLWELLVRQW GLSALVLPAP SAIAASLWTG LATGYFWPHI 
RATLQALLLG LAAGSAIGLL AGMALAESEL LERVLKPYVV VSQVVPKLAL APLFVLWFGF
GMLPTVLITA LICFFPLMEN TLTGLRQVDA QRLQLFRMLG ATRLQTLLRL KLPTGLPAIL
AGLRVAVVLA LVGAVVAEFM GASRGLGAVV IAAQGMMDTT LMFAALVLIA AMGLLLYQAC
LVLERRLLRS RAA