More than 300 homologs were found in PanDaTox collection
for query gene Daci_4527 on replicon NC_010002
Organism: Delftia acidovorans SPH-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010002  Daci_4527  binding-protein-dependent transport systems inner membrane component  100 
 
 
253 aa  474  1e-133  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_4514  binding-protein-dependent transport systems inner membrane component  83.04 
 
 
263 aa  285  2.9999999999999996e-76  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.99074 
 
 
-
 
NC_009485  BBta_7629  putative ABC transporter permease protein  42.92 
 
 
282 aa  187  2e-46  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.262472  normal  0.441686 
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  41.74 
 
 
261 aa  187  2e-46  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_009485  BBta_1169  putative ABC transporter permease protein  43.81 
 
 
279 aa  179  4e-44  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  40.85 
 
 
273 aa  173  2.9999999999999996e-42  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0770  binding-protein-dependent transport systems inner membrane component  41.63 
 
 
273 aa  171  7.999999999999999e-42  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_1862  binding-protein-dependent transport systems inner membrane component  39.57 
 
 
257 aa  170  2e-41  Variovorax paradoxus S110  Bacteria  normal  0.116723  n/a   
 
 
-
 
NC_008786  Veis_0620  binding-protein-dependent transport systems inner membrane component  44.28 
 
 
254 aa  167  2e-40  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.63161  normal 
 
 
-
 
NC_013525  Tter_0403  binding-protein-dependent transport systems inner membrane component  39.83 
 
 
271 aa  166  5e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010623  Bphy_3181  binding-protein-dependent transport systems inner membrane component  38.33 
 
 
277 aa  164  8e-40  Burkholderia phymatum STM815  Bacteria  normal  0.0283642  normal 
 
 
-
 
NC_009719  Plav_0891  binding-protein-dependent transport systems inner membrane component  39.92 
 
 
268 aa  160  1e-38  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.223421 
 
 
-
 
NC_009669  Oant_4580  binding-protein-dependent transport systems inner membrane component  39.75 
 
 
257 aa  160  1e-38  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_012792  Vapar_6052  binding-protein-dependent transport systems inner membrane component  39.32 
 
 
274 aa  160  2e-38  Variovorax paradoxus S110  Bacteria  normal  0.0454164  n/a   
 
 
-
 
NC_013525  Tter_1221  binding-protein-dependent transport systems inner membrane component  36.44 
 
 
246 aa  160  3e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013946  Mrub_1393  binding-protein-dependent transport systems inner membrane component  40.08 
 
 
254 aa  156  2e-37  Meiothermus ruber DSM 1279  Bacteria  normal  0.302994  normal  0.157809 
 
 
-
 
NC_009921  Franean1_3131  binding-protein-dependent transport systems inner membrane component  34.04 
 
 
281 aa  154  9e-37  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_0111  ABC transporter related  49.71 
 
 
493 aa  154  1e-36  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_0033  binding-protein-dependent transport systems inner membrane component  39.24 
 
 
243 aa  154  1e-36  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_2621  binding-protein-dependent transport systems inner membrane component  36.71 
 
 
281 aa  154  2e-36  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00000218671  n/a   
 
 
-
 
NC_008254  Meso_0814  binding-protein-dependent transport systems inner membrane component  35.53 
 
 
270 aa  153  2.9999999999999998e-36  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3606  binding-protein-dependent transport systems inner membrane component  38.67 
 
 
257 aa  152  7e-36  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.071611 
 
 
-
 
NC_009253  Dred_3205  binding-protein-dependent transport systems inner membrane component  36.65 
 
 
265 aa  150  2e-35  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.000457845  n/a   
 
 
-
 
NC_011658  BCAH187_A0881  putative ABC transporter, permease protein  37.08 
 
 
251 aa  149  3e-35  Bacillus cereus AH187  Bacteria  hitchhiker  0.00328051  n/a   
 
 
-
 
NC_007778  RPB_3118  binding-protein dependent transport system inner membrane protein  36.36 
 
 
284 aa  149  4e-35  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4887  binding-protein-dependent transport systems inner membrane component  38.6 
 
 
267 aa  148  7e-35  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4547  putative ABC transporter, permease protein  36.25 
 
 
251 aa  147  1.0000000000000001e-34  Bacillus cereus G9842  Bacteria  normal  0.113137  normal  0.441246 
 
 
-
 
NC_003909  BCE_0797  ABC transporter, permease protein, putative  36.67 
 
 
250 aa  147  2.0000000000000003e-34  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0637  ABC transporter, permease  36.25 
 
 
250 aa  147  2.0000000000000003e-34  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000865  hydroxymethylpyrimidine ABC transporter transmembrane component  39.19 
 
 
266 aa  147  2.0000000000000003e-34  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0804  putative ABC transporter, permease protein  36.25 
 
 
250 aa  147  2.0000000000000003e-34  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.22036e-46 
 
 
-
 
NC_005945  BAS0693  ABC transporter permease  36.25 
 
 
250 aa  146  3e-34  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0637  ABC transporter, permease  36.25 
 
 
250 aa  146  3e-34  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00537874  n/a   
 
 
-
 
NC_007530  GBAA_0727  ABC transporter permease  36.25 
 
 
250 aa  146  3e-34  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0363276  n/a   
 
 
-
 
NC_013739  Cwoe_4254  binding-protein-dependent transport systems inner membrane component  35.04 
 
 
283 aa  146  3e-34  Conexibacter woesei DSM 14684  Bacteria  normal  0.0441349  normal  0.902161 
 
 
-
 
NC_009050  Rsph17029_3904  binding-protein-dependent transport systems inner membrane component  37.25 
 
 
281 aa  146  4.0000000000000006e-34  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A0784  putative ABC transporter, permease protein  35.83 
 
 
250 aa  145  6e-34  Bacillus cereus B4264  Bacteria  normal  0.605831  n/a   
 
 
-
 
NC_007494  RSP_3166  ABC transporter, inner membrane subunit  37.7 
 
 
281 aa  145  7.0000000000000006e-34  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0643  binding-protein-dependent transport systems inner membrane component  35.9 
 
 
251 aa  145  7.0000000000000006e-34  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3093  binding-protein dependent transport system inner membrane protein  36.73 
 
 
259 aa  145  8.000000000000001e-34  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.942666 
 
 
-
 
NC_009674  Bcer98_0614  binding-protein-dependent transport systems inner membrane component  37.04 
 
 
250 aa  144  1e-33  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_2545  binding-protein-dependent transport system protein  35.02 
 
 
287 aa  144  1e-33  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.240068  normal  0.521676 
 
 
-
 
NC_009784  VIBHAR_06840  ABC-type nitrate/sulfonate/bicarbonate transport system permease component  38.64 
 
 
266 aa  144  2e-33  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007802  Jann_3753  binding-protein-dependent transport systems inner membrane component  34.13 
 
 
268 aa  143  2e-33  Jannaschia sp. CCS1  Bacteria  normal  0.333865  normal 
 
 
-
 
NC_007963  Csal_1933  binding-protein-dependent transport systems inner membrane component  40.66 
 
 
255 aa  144  2e-33  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.323499  n/a   
 
 
-
 
NC_003909  BCE_0491  ABC transporter, permease protein, putative  33.77 
 
 
257 aa  143  3e-33  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2734  binding-protein-dependent transport systems inner membrane component  38.98 
 
 
267 aa  143  3e-33  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.549296  normal 
 
 
-
 
NC_011658  BCAH187_A0493  putative ABC transporter, permease protein  33.77 
 
 
257 aa  143  3e-33  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3112  binding-protein-dependent transport systems inner membrane component  41.06 
 
 
253 aa  142  4e-33  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0371548 
 
 
-
 
NC_008148  Rxyl_2084  binding-protein-dependent transport systems inner membrane component  40.76 
 
 
260 aa  142  4e-33  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.566245  n/a   
 
 
-
 
NC_014210  Ndas_4504  binding-protein-dependent transport systems inner membrane component  43.92 
 
 
281 aa  142  6e-33  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_0381  ABC transporter permease  33.33 
 
 
257 aa  141  8e-33  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0446  putative ABC transporter, permease protein  33.33 
 
 
257 aa  141  8e-33  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0424  putative ABC transporter, permease protein  33.33 
 
 
257 aa  141  8e-33  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS0367  ABC transporter permease  33.33 
 
 
265 aa  141  9.999999999999999e-33  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0357  ABC transporter, permease  33.33 
 
 
265 aa  141  9.999999999999999e-33  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2763  binding-protein-dependent transport systems inner membrane component  39.64 
 
 
275 aa  141  9.999999999999999e-33  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B4878  putative ABC transporter, permease protein  33.33 
 
 
255 aa  141  9.999999999999999e-33  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4149  binding-protein-dependent transport systems inner membrane component  33.75 
 
 
276 aa  140  1.9999999999999998e-32  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4037  binding-protein-dependent transport systems inner membrane component  33.75 
 
 
276 aa  140  1.9999999999999998e-32  Ralstonia pickettii 12J  Bacteria  normal  0.960786  normal 
 
 
-
 
NC_013521  Sked_02100  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  42.86 
 
 
308 aa  139  3e-32  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_2064  binding-protein-dependent transport systems inner membrane component  31.82 
 
 
254 aa  139  3e-32  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.00112586  n/a   
 
 
-
 
NC_009667  Oant_0278  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
258 aa  139  3.9999999999999997e-32  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0362  binding-protein-dependent transport systems inner membrane component  32.9 
 
 
255 aa  139  3.9999999999999997e-32  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_2389  binding-protein-dependent transport systems inner membrane component  39.9 
 
 
275 aa  138  7e-32  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK0354  ABC transporter, permease  32.9 
 
 
265 aa  137  1e-31  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_3269  binding-protein-dependent transport systems inner membrane component  40.79 
 
 
253 aa  137  1e-31  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.283078  normal 
 
 
-
 
NC_009921  Franean1_4522  binding-protein-dependent transport systems inner membrane component  34.4 
 
 
329 aa  136  3.0000000000000003e-31  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1095  binding-protein-dependent transport systems inner membrane component  34.8 
 
 
255 aa  136  3.0000000000000003e-31  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007509  Bcep18194_C7650  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  37.23 
 
 
247 aa  135  4e-31  Burkholderia sp. 383  Bacteria  normal  0.621765  normal 
 
 
-
 
NC_009972  Haur_1578  binding-protein-dependent transport systems inner membrane component  36.73 
 
 
274 aa  136  4e-31  Herpetosiphon aurantiacus ATCC 23779  Bacteria  decreased coverage  0.000362296  n/a   
 
 
-
 
NC_009720  Xaut_3758  binding-protein-dependent transport systems inner membrane component  32.77 
 
 
256 aa  135  5e-31  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_3124  binding-protein-dependent transport systems inner membrane component  39.42 
 
 
255 aa  135  7.000000000000001e-31  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_0394  binding-protein-dependent transport systems inner membrane component  34.36 
 
 
259 aa  135  7.000000000000001e-31  Cupriavidus metallidurans CH34  Bacteria  normal  hitchhiker  0.00657833 
 
 
-
 
NC_010681  Bphyt_1488  binding-protein-dependent transport systems inner membrane component  36.99 
 
 
247 aa  135  8e-31  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_3419  binding-protein-dependent transport systems inner membrane component  36.86 
 
 
258 aa  135  9e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.121812  n/a   
 
 
-
 
NC_013131  Caci_5602  binding-protein-dependent transport systems inner membrane component  35.8 
 
 
302 aa  134  9.999999999999999e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.033554  normal  0.953446 
 
 
-
 
NC_013165  Shel_13670  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  34.75 
 
 
249 aa  134  9.999999999999999e-31  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_0370  binding-protein-dependent transport systems inner membrane component  33.04 
 
 
256 aa  134  9.999999999999999e-31  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008043  TM1040_3658  binding-protein-dependent transport systems inner membrane component  35.81 
 
 
245 aa  134  9.999999999999999e-31  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2038  binding-protein-dependent transport systems inner membrane component  38.82 
 
 
264 aa  134  9.999999999999999e-31  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.697058  normal  0.743835 
 
 
-
 
NC_011831  Cagg_3116  binding-protein-dependent transport systems inner membrane component  40.36 
 
 
272 aa  133  1.9999999999999998e-30  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.025765  normal 
 
 
-
 
NC_013223  Dret_2296  binding-protein-dependent transport systems inner membrane component  38.98 
 
 
250 aa  133  3e-30  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2127  binding-protein-dependent transport systems inner membrane component  35.74 
 
 
255 aa  133  3e-30  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.427162 
 
 
-
 
NC_012850  Rleg_3934  binding-protein-dependent transport systems inner membrane component  37.66 
 
 
278 aa  132  3.9999999999999996e-30  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.421742  normal 
 
 
-
 
NC_009012  Cthe_2116  binding-protein-dependent transport systems inner membrane component  29.61 
 
 
253 aa  132  3.9999999999999996e-30  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_1044  binding-protein-dependent transport systems inner membrane component  34.01 
 
 
263 aa  132  5e-30  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1719  binding-protein-dependent transport systems inner membrane component  38.4 
 
 
264 aa  132  5e-30  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_2703  binding-protein-dependent transport systems inner membrane component  35.32 
 
 
263 aa  132  6e-30  Marinomonas sp. MWYL1  Bacteria  normal  0.88688  normal 
 
 
-
 
NC_012856  Rpic12D_1136  binding-protein-dependent transport systems inner membrane component  34.01 
 
 
263 aa  132  6e-30  Ralstonia pickettii 12D  Bacteria  normal  0.629035  normal  0.968824 
 
 
-
 
NC_004310  BR0211  ABC transporter, permease protein  34.65 
 
 
258 aa  131  7.999999999999999e-30  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_3961  binding-protein-dependent transport systems inner membrane component  31.72 
 
 
256 aa  131  1.0000000000000001e-29  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0666  binding-protein-dependent transport systems inner membrane component  39.06 
 
 
272 aa  130  1.0000000000000001e-29  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_012852  Rleg_6281  binding-protein-dependent transport systems inner membrane component  34.87 
 
 
256 aa  130  1.0000000000000001e-29  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.783663  normal 
 
 
-
 
NC_009832  Spro_1736  binding-protein-dependent transport systems inner membrane component  33.88 
 
 
264 aa  130  1.0000000000000001e-29  Serratia proteamaculans 568  Bacteria  normal  0.440066  normal  0.144233 
 
 
-
 
NC_009505  BOV_0202  ABC transporter, permease protein  34.65 
 
 
258 aa  131  1.0000000000000001e-29  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0669  binding-protein-dependent transport systems inner membrane component  38.2 
 
 
272 aa  131  1.0000000000000001e-29  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0848141 
 
 
-
 
NC_013173  Dbac_0926  binding-protein-dependent transport systems inner membrane component  42.46 
 
 
249 aa  130  2.0000000000000002e-29  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.04587  n/a   
 
 
-
 
NC_010622  Bphy_0957  binding-protein-dependent transport systems inner membrane component  33.18 
 
 
274 aa  130  2.0000000000000002e-29  Burkholderia phymatum STM815  Bacteria  normal  0.199065  normal 
 
 
-
 
NC_009380  Strop_3877  binding-protein-dependent transport systems inner membrane component  37.83 
 
 
282 aa  130  2.0000000000000002e-29  Salinispora tropica CNB-440  Bacteria  normal  0.901388  normal 
 
 
-
 
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