More than 300 homologs were found in PanDaTox collection
for query gene Mchl_2038 on replicon NC_011757
Organism: Methylobacterium chloromethanicum CM4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011757  Mchl_2038  binding-protein-dependent transport systems inner membrane component  100 
 
 
264 aa  508  1e-143  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.697058  normal  0.743835 
 
 
-
 
NC_010172  Mext_1719  binding-protein-dependent transport systems inner membrane component  98.48 
 
 
264 aa  503  1e-141  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1095  binding-protein-dependent transport systems inner membrane component  96.59 
 
 
264 aa  478  1e-134  Methylobacterium populi BJ001  Bacteria  normal  0.0240883  normal  0.166534 
 
 
-
 
NC_009485  BBta_1263  ABC transporter permease  69.92 
 
 
262 aa  331  8e-90  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.165267 
 
 
-
 
NC_012791  Vapar_4760  binding-protein-dependent transport systems inner membrane component  59.07 
 
 
267 aa  299  3e-80  Variovorax paradoxus S110  Bacteria  normal  0.318809  n/a   
 
 
-
 
NC_007951  Bxe_A2015  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  63.05 
 
 
252 aa  293  2e-78  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2588  binding-protein-dependent transport systems inner membrane component  62.16 
 
 
267 aa  287  1e-76  Pseudomonas putida W619  Bacteria  normal  normal  0.417353 
 
 
-
 
NC_002947  PP_3210  ABC transporter, permease protein  62.16 
 
 
267 aa  286  2e-76  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0801  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  52.85 
 
 
298 aa  265  8e-70  Burkholderia xenovorans LB400  Bacteria  normal  0.0745387  normal 
 
 
-
 
NC_009668  Oant_3871  binding-protein-dependent transport systems inner membrane component  54.47 
 
 
280 aa  258  7e-68  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.208081  n/a   
 
 
-
 
NC_008312  Tery_1625  binding-protein-dependent transport systems inner membrane component  50.61 
 
 
285 aa  240  2e-62  Trichodesmium erythraeum IMS101  Bacteria  normal  0.0792607  normal  0.95709 
 
 
-
 
NC_009719  Plav_0891  binding-protein-dependent transport systems inner membrane component  54.07 
 
 
268 aa  235  7e-61  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.223421 
 
 
-
 
NC_007802  Jann_1473  binding-protein-dependent transport systems inner membrane component  47.97 
 
 
283 aa  226  2e-58  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_1676  binding-protein-dependent transport systems inner membrane component  47.24 
 
 
287 aa  211  7.999999999999999e-54  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00381914  normal 
 
 
-
 
NC_012791  Vapar_5134  binding-protein-dependent transport systems inner membrane component  48.44 
 
 
294 aa  211  1e-53  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_0333  binding-protein dependent transport system inner membrane protein  48.02 
 
 
278 aa  210  2e-53  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_3552  ABC transporter membrane spanning protein  47.97 
 
 
285 aa  209  3e-53  Agrobacterium vitis S4  Bacteria  normal  0.0625026  n/a   
 
 
-
 
NC_007964  Nham_0427  binding-protein-dependent transport systems inner membrane component  47.66 
 
 
279 aa  205  8e-52  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A3414  ATP-binding protein of ABC transporter  48.13 
 
 
280 aa  201  7e-51  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.24016 
 
 
-
 
NC_012848  Rleg_4665  binding-protein-dependent transport systems inner membrane component  45.49 
 
 
284 aa  199  5e-50  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.65192 
 
 
-
 
NC_008786  Veis_3145  binding-protein-dependent transport systems inner membrane component  51.3 
 
 
298 aa  196  3e-49  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.433007  normal  0.243208 
 
 
-
 
NC_009952  Dshi_1382  binding-protein-dependent transport systems inner membrane component  46.59 
 
 
285 aa  195  8.000000000000001e-49  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.13305  normal 
 
 
-
 
NC_011004  Rpal_0469  binding-protein-dependent transport systems inner membrane component  50 
 
 
274 aa  194  2e-48  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.858995  n/a   
 
 
-
 
NC_007958  RPD_0258  binding-protein-dependent transport systems inner membrane component  49.56 
 
 
274 aa  187  2e-46  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.750925 
 
 
-
 
NC_009484  Acry_0832  binding-protein-dependent transport systems inner membrane component  48.31 
 
 
254 aa  184  1.0000000000000001e-45  Acidiphilium cryptum JF-5  Bacteria  normal  0.404323  n/a   
 
 
-
 
NC_007778  RPB_0572  binding-protein-dependent transport systems inner membrane component  51.28 
 
 
274 aa  181  9.000000000000001e-45  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0627389  normal  0.343483 
 
 
-
 
NC_007925  RPC_0572  binding-protein-dependent transport systems inner membrane component  47.41 
 
 
276 aa  174  9e-43  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7480  ABC transporter permease  46.61 
 
 
271 aa  173  1.9999999999999998e-42  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.477102  normal  0.131238 
 
 
-
 
NC_010581  Bind_1091  binding-protein-dependent transport systems inner membrane component  47.92 
 
 
262 aa  173  2.9999999999999996e-42  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1164  binding-protein-dependent transport systems inner membrane component  49.33 
 
 
260 aa  169  4e-41  Methylocella silvestris BL2  Bacteria  n/a    normal  0.233018 
 
 
-
 
NC_014148  Plim_2867  binding-protein-dependent transport systems inner membrane component  39.11 
 
 
277 aa  169  4e-41  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_009669  Oant_4580  binding-protein-dependent transport systems inner membrane component  40.8 
 
 
257 aa  164  1.0000000000000001e-39  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1862  binding-protein-dependent transport systems inner membrane component  36.44 
 
 
257 aa  150  3e-35  Variovorax paradoxus S110  Bacteria  normal  0.116723  n/a   
 
 
-
 
NC_010338  Caul_1260  binding-protein-dependent transport systems inner membrane component  43.67 
 
 
252 aa  149  4e-35  Caulobacter sp. K31  Bacteria  normal  0.21476  normal  0.0147088 
 
 
-
 
NC_007802  Jann_3753  binding-protein-dependent transport systems inner membrane component  33.6 
 
 
268 aa  147  3e-34  Jannaschia sp. CCS1  Bacteria  normal  0.333865  normal 
 
 
-
 
NC_008786  Veis_0620  binding-protein-dependent transport systems inner membrane component  37.23 
 
 
254 aa  146  4.0000000000000006e-34  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.63161  normal 
 
 
-
 
NC_009654  Mmwyl1_2703  binding-protein-dependent transport systems inner membrane component  35.74 
 
 
263 aa  143  2e-33  Marinomonas sp. MWYL1  Bacteria  normal  0.88688  normal 
 
 
-
 
NC_007778  RPB_3118  binding-protein dependent transport system inner membrane protein  36.4 
 
 
284 aa  142  5e-33  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  38.84 
 
 
273 aa  141  9.999999999999999e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_2033  binding-protein-dependent transport systems inner membrane component  41.94 
 
 
275 aa  140  3e-32  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0253714  normal  0.258175 
 
 
-
 
NC_013739  Cwoe_4254  binding-protein-dependent transport systems inner membrane component  35.98 
 
 
283 aa  138  7.999999999999999e-32  Conexibacter woesei DSM 14684  Bacteria  normal  0.0441349  normal  0.902161 
 
 
-
 
NC_007778  RPB_3093  binding-protein dependent transport system inner membrane protein  38.71 
 
 
259 aa  138  8.999999999999999e-32  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.942666 
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  37.93 
 
 
261 aa  138  8.999999999999999e-32  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_009921  Franean1_2281  binding-protein-dependent transport systems inner membrane component  37.89 
 
 
281 aa  137  2e-31  Frankia sp. EAN1pec  Bacteria  normal  0.695693  normal  0.331928 
 
 
-
 
NC_011894  Mnod_3419  binding-protein-dependent transport systems inner membrane component  38.49 
 
 
258 aa  137  2e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.121812  n/a   
 
 
-
 
NC_011988  Avi_5406  ABC transporter membrane spanning protein  35.54 
 
 
251 aa  135  5e-31  Agrobacterium vitis S4  Bacteria  normal  0.408693  n/a   
 
 
-
 
NC_009921  Franean1_3131  binding-protein-dependent transport systems inner membrane component  36.16 
 
 
281 aa  135  7.000000000000001e-31  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2372  binding-protein-dependent transport systems inner membrane component  37.33 
 
 
289 aa  134  9.999999999999999e-31  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.239724 
 
 
-
 
NC_010511  M446_0770  binding-protein-dependent transport systems inner membrane component  39.19 
 
 
273 aa  133  3e-30  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3810  binding-protein-dependent transport systems inner membrane component  31.62 
 
 
258 aa  130  2.0000000000000002e-29  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.42897 
 
 
-
 
NC_010623  Bphy_3181  binding-protein-dependent transport systems inner membrane component  36.91 
 
 
277 aa  130  3e-29  Burkholderia phymatum STM815  Bacteria  normal  0.0283642  normal 
 
 
-
 
NC_008254  Meso_0814  binding-protein-dependent transport systems inner membrane component  35.25 
 
 
270 aa  127  2.0000000000000002e-28  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_3758  binding-protein-dependent transport systems inner membrane component  31.36 
 
 
256 aa  127  2.0000000000000002e-28  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_3460  ABC transporter membrane spanning protein  35.37 
 
 
288 aa  126  4.0000000000000003e-28  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3891  binding-protein-dependent transport systems inner membrane component  35.66 
 
 
300 aa  124  1e-27  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.000896674  normal  0.103005 
 
 
-
 
NC_008044  TM1040_1494  binding-protein-dependent transport systems inner membrane component  33.59 
 
 
281 aa  124  2e-27  Ruegeria sp. TM1040  Bacteria  normal  0.58323  normal 
 
 
-
 
NC_013521  Sked_17280  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  34.78 
 
 
325 aa  121  9.999999999999999e-27  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.158115  normal  0.544115 
 
 
-
 
NC_008254  Meso_2046  binding-protein-dependent transport systems inner membrane component  33.9 
 
 
286 aa  121  9.999999999999999e-27  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3788  binding-protein-dependent transport systems inner membrane component  36.61 
 
 
317 aa  121  9.999999999999999e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0255815  normal 
 
 
-
 
NC_010524  Lcho_1095  binding-protein-dependent transport systems inner membrane component  28.87 
 
 
255 aa  120  3e-26  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_012791  Vapar_0620  binding-protein-dependent transport systems inner membrane component  35.44 
 
 
258 aa  119  4.9999999999999996e-26  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_0259  binding-protein-dependent transport systems inner membrane component  36.74 
 
 
453 aa  119  7e-26  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_1393  binding-protein-dependent transport systems inner membrane component  32.34 
 
 
254 aa  119  7e-26  Meiothermus ruber DSM 1279  Bacteria  normal  0.302994  normal  0.157809 
 
 
-
 
NC_003909  BCE_0797  ABC transporter, permease protein, putative  34.15 
 
 
250 aa  117  9.999999999999999e-26  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0881  putative ABC transporter, permease protein  34.29 
 
 
251 aa  118  9.999999999999999e-26  Bacillus cereus AH187  Bacteria  hitchhiker  0.00328051  n/a   
 
 
-
 
NC_011772  BCG9842_B4547  putative ABC transporter, permease protein  33.74 
 
 
251 aa  117  3e-25  Bacillus cereus G9842  Bacteria  normal  0.113137  normal  0.441246 
 
 
-
 
NC_012792  Vapar_6052  binding-protein-dependent transport systems inner membrane component  33.03 
 
 
274 aa  117  3e-25  Variovorax paradoxus S110  Bacteria  normal  0.0454164  n/a   
 
 
-
 
NC_009485  BBta_1169  putative ABC transporter permease protein  34 
 
 
279 aa  116  3.9999999999999997e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK0637  ABC transporter, permease  32.93 
 
 
250 aa  115  5e-25  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0693  ABC transporter permease  32.93 
 
 
250 aa  115  6.9999999999999995e-25  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0727  ABC transporter permease  32.93 
 
 
250 aa  115  6.9999999999999995e-25  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0363276  n/a   
 
 
-
 
NC_011773  BCAH820_0804  putative ABC transporter, permease protein  32.93 
 
 
250 aa  115  6.9999999999999995e-25  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.22036e-46 
 
 
-
 
NC_005957  BT9727_0637  ABC transporter, permease  32.93 
 
 
250 aa  115  7.999999999999999e-25  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00537874  n/a   
 
 
-
 
NC_009012  Cthe_2116  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
253 aa  115  8.999999999999998e-25  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0643  binding-protein-dependent transport systems inner membrane component  33.74 
 
 
251 aa  115  1.0000000000000001e-24  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3112  binding-protein-dependent transport systems inner membrane component  36.8 
 
 
253 aa  114  1.0000000000000001e-24  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0371548 
 
 
-
 
NC_007494  RSP_3166  ABC transporter, inner membrane subunit  33.6 
 
 
281 aa  114  1.0000000000000001e-24  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4504  binding-protein-dependent transport systems inner membrane component  33.93 
 
 
281 aa  114  1.0000000000000001e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_3042  binding-protein-dependent transport systems inner membrane component  32.92 
 
 
375 aa  114  1.0000000000000001e-24  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2099  binding-protein-dependent transport systems inner membrane component  35.24 
 
 
306 aa  114  2.0000000000000002e-24  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_1140  binding-protein-dependent transport systems inner membrane component  26.67 
 
 
255 aa  114  2.0000000000000002e-24  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A3455  binding-protein dependent transport system inner membrane protein  34.22 
 
 
322 aa  114  2.0000000000000002e-24  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.833863  n/a   
 
 
-
 
NC_008786  Veis_3506  binding-protein-dependent transport systems inner membrane component  31.8 
 
 
282 aa  114  2.0000000000000002e-24  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0528385  normal  0.0939424 
 
 
-
 
NC_009952  Dshi_1373  binding-protein-dependent transport systems inner membrane component  31.38 
 
 
303 aa  114  2.0000000000000002e-24  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.674946  normal  0.833857 
 
 
-
 
NC_009050  Rsph17029_3904  binding-protein-dependent transport systems inner membrane component  33.6 
 
 
281 aa  114  2.0000000000000002e-24  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_0344  binding-protein-dependent transport systems inner membrane component  34.32 
 
 
286 aa  113  3e-24  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.113814  n/a   
 
 
-
 
NC_008786  Veis_2127  binding-protein-dependent transport systems inner membrane component  28.95 
 
 
255 aa  113  3e-24  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.427162 
 
 
-
 
NC_013165  Shel_13670  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  30.42 
 
 
249 aa  113  4.0000000000000004e-24  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0926  binding-protein-dependent transport systems inner membrane component  35.27 
 
 
249 aa  113  4.0000000000000004e-24  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.04587  n/a   
 
 
-
 
NC_012791  Vapar_3961  binding-protein-dependent transport systems inner membrane component  27.08 
 
 
256 aa  113  4.0000000000000004e-24  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_02100  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  32.22 
 
 
308 aa  112  5e-24  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_2762  binding-protein-dependent transport systems inner membrane component  35.02 
 
 
250 aa  112  7.000000000000001e-24  Conexibacter woesei DSM 14684  Bacteria  normal  0.0247808  normal  0.0244453 
 
 
-
 
NC_008752  Aave_1091  binding-protein-dependent transport systems inner membrane component  27.2 
 
 
258 aa  112  9e-24  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0347556  normal 
 
 
-
 
NC_007973  Rmet_0394  binding-protein-dependent transport systems inner membrane component  29.87 
 
 
259 aa  111  1.0000000000000001e-23  Cupriavidus metallidurans CH34  Bacteria  normal  hitchhiker  0.00657833 
 
 
-
 
NC_008148  Rxyl_2084  binding-protein-dependent transport systems inner membrane component  34.96 
 
 
260 aa  111  1.0000000000000001e-23  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.566245  n/a   
 
 
-
 
NC_011989  Avi_3459  ABC transporter  34.59 
 
 
288 aa  111  1.0000000000000001e-23  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6031  putative ABC transporter, permease protein  32.79 
 
 
325 aa  110  2.0000000000000002e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A0784  putative ABC transporter, permease protein  32.52 
 
 
250 aa  110  2.0000000000000002e-23  Bacillus cereus B4264  Bacteria  normal  0.605831  n/a   
 
 
-
 
NC_008025  Dgeo_0111  ABC transporter related  35.45 
 
 
493 aa  110  2.0000000000000002e-23  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1883  binding-protein-dependent transport systems inner membrane component  32 
 
 
322 aa  110  2.0000000000000002e-23  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.167871 
 
 
-
 
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