| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0394 |
|---|
| Symbol | |
|---|
| ID | 4037181 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 422426 |
|---|
| End bp | 423205 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637975768 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_582549 |
|---|
| Protein GI | 94309339 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00657833 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATCATGA ACACGATGTC TTCGATTCAG GCAAAGCGCG TGCAGCGCGT GGCCCCGTGG
CTGTTGCTGG GTGCGTTCCT GTTGCTGTGG CAGGTGGCGT GTCTCGCGTT CAACGTGTCG
GACTTCATCT TGCCGAGCCC GTCTTCGATT GTCGCTTCGA TGGCCGAGTA TGGCGATGTG
ATCGCCGCTC ACGCGTGGCG CACCTTCTGG ACCACGATGG TCGGCTTCGG CCTGGCCATC
GCGGTGGGCG TGGTGCTCGG CATGCTGATG GGATCGTCGA AACTGGCGTA CGCGGCGACC
TATCCGCTGA TGACGGCCTT CAACGCGCTG CCGAAGGCGG CGTTCGTGCC GATCCTGGTG
GTGTGGTTTG GGCTTGGCGC CGGGCCGGCG ATCCTGACCG CGTTCCTGAT CTCGTTCTTC
CCGATCATGG TCAATATCGC GACGGGGCTG GCGACACTCG AACCCGAACT CGAGGACGTA
CTGCGCGTGC TCGGCGCCAA GCGTCGCGAC GTGCTGCTGA AGGTGGGCCT GCCCCGCGCG
ATGCCGTTCT TCTTCGCCTC GCTGAAGGTG GCGATCACGC TTGCGTTCGT CGGCACCACG
GTGTCGGAGA TGAACGCCGC CAACGAAGGA ATCGGCTATC TGCTCGTGTC CGCAGGATCG
GCCATGAAGA TGCCGCTGGC GTTCGCCGGT CTCGTCGTCA TCGCCATCAT GGCGATGGGC
ATGTATGAGC TGTTCTCGGT GCTGGAGAAA CGGATGACGG GCTGGGCGCA TCGAGGGTGA
|
|---|
| Protein sequence | MIMNTMSSIQ AKRVQRVAPW LLLGAFLLLW QVACLAFNVS DFILPSPSSI VASMAEYGDV
IAAHAWRTFW TTMVGFGLAI AVGVVLGMLM GSSKLAYAAT YPLMTAFNAL PKAAFVPILV
VWFGLGAGPA ILTAFLISFF PIMVNIATGL ATLEPELEDV LRVLGAKRRD VLLKVGLPRA
MPFFFASLKV AITLAFVGTT VSEMNAANEG IGYLLVSAGS AMKMPLAFAG LVVIAIMAMG
MYELFSVLEK RMTGWAHRG
|
|---|
| |