Gene Bphyt_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1488 
Symbol 
ID6280773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1665250 
End bp1665993 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content65% 
IMG OID642621053 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001895126 
Protein GI187923484 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGAT TGATCGAAAC TGTCTCGTTC TGGATCGTGA TCGGCCTGGT CTGGGAGTTC 
GGCGTGCGCT GGACGGGCAC GCGTGAGTAC GTGTTGCCGG CGCTCTCGCA GGTGTTTGCC
GCCGGTTGGG AGATGCGCGG CCAGTTGCTC GCGGATACGC TCGCGACCGC CTGGGAAGTG
TTCGCCGGTT TTGCGCTGGC GCTTGTCGGC GGGCTTGCGA TCGGCCTGCT CGCGAGTATG
TCGAGCATCG CGCGACGCAC CTTGTTCCCG CTCGTCACCG CGTTGCAGAG CATGCCGAAG
ATCGCGCTCG CGCCCTTGCT GATCGTATGG TTCGGCTATG GATTCGCCTC GAAGCTGGCC
GCTGCCGTGC TGTTCGCGTT CTTCCCGATC GTGATCGCGA CGATGGGCGG TCTGGCCGGC
GTGCCGCGTA ATCTGGACGA GCATTTCCGC GCGCTTGGCG CGTCGCCGGC CAGGACCTTC
TGGCATTTGC GCTTGCCCGC CGCGTTGCCC GCGCTGATCG ACGGCTTGAA GATCGCCATG
CCGCTCGCGG TGATCGGCGC GATTGTCGGC GAGTTCATCG GTTCGGAGTC CGGCCTCGGG
CACCTGATCG TCTTCGCGAC CTCGAACGCG CAGACAGCGC TTTCGTTCGC GGCGATCCTG
ATGGTGACCG CGCTGGCCAT GCTGTTTTAC TGGGCCGTCG AACTGGTTTC GCGCGGCGTA
TGGTGGAGAG GAGTGACGGT CTGA
 
Protein sequence
MKRLIETVSF WIVIGLVWEF GVRWTGTREY VLPALSQVFA AGWEMRGQLL ADTLATAWEV 
FAGFALALVG GLAIGLLASM SSIARRTLFP LVTALQSMPK IALAPLLIVW FGYGFASKLA
AAVLFAFFPI VIATMGGLAG VPRNLDEHFR ALGASPARTF WHLRLPAALP ALIDGLKIAM
PLAVIGAIVG EFIGSESGLG HLIVFATSNA QTALSFAAIL MVTALAMLFY WAVELVSRGV
WWRGVTV