More than 300 homologs were found in PanDaTox collection
for query gene Bphyt_1488 on replicon NC_010681
Organism: Burkholderia phytofirmans PsJN



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010681  Bphyt_1488  binding-protein-dependent transport systems inner membrane component  100 
 
 
247 aa  476  1e-133  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C7650  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  86.99 
 
 
247 aa  420  1e-116  Burkholderia sp. 383  Bacteria  normal  0.621765  normal 
 
 
-
 
NC_012792  Vapar_6052  binding-protein-dependent transport systems inner membrane component  40.61 
 
 
274 aa  171  9e-42  Variovorax paradoxus S110  Bacteria  normal  0.0454164  n/a   
 
 
-
 
NC_013525  Tter_1221  binding-protein-dependent transport systems inner membrane component  40.61 
 
 
246 aa  163  3e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009253  Dred_3205  binding-protein-dependent transport systems inner membrane component  38.05 
 
 
265 aa  159  3e-38  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.000457845  n/a   
 
 
-
 
NC_007778  RPB_3118  binding-protein dependent transport system inner membrane protein  38.84 
 
 
284 aa  159  4e-38  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_1862  binding-protein-dependent transport systems inner membrane component  35.53 
 
 
257 aa  154  9e-37  Variovorax paradoxus S110  Bacteria  normal  0.116723  n/a   
 
 
-
 
NC_008786  Veis_0620  binding-protein-dependent transport systems inner membrane component  36.2 
 
 
254 aa  153  2e-36  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.63161  normal 
 
 
-
 
NC_011365  Gdia_3269  binding-protein-dependent transport systems inner membrane component  41.23 
 
 
253 aa  153  2.9999999999999998e-36  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.283078  normal 
 
 
-
 
NC_012791  Vapar_0620  binding-protein-dependent transport systems inner membrane component  46.67 
 
 
258 aa  146  2.0000000000000003e-34  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4254  binding-protein-dependent transport systems inner membrane component  35.81 
 
 
283 aa  146  3e-34  Conexibacter woesei DSM 14684  Bacteria  normal  0.0441349  normal  0.902161 
 
 
-
 
NC_010623  Bphy_3181  binding-protein-dependent transport systems inner membrane component  36.44 
 
 
277 aa  144  9e-34  Burkholderia phymatum STM815  Bacteria  normal  0.0283642  normal 
 
 
-
 
NC_009720  Xaut_3758  binding-protein-dependent transport systems inner membrane component  37.61 
 
 
256 aa  144  1e-33  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  37.04 
 
 
261 aa  144  1e-33  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_003909  BCE_0797  ABC transporter, permease protein, putative  35.1 
 
 
250 aa  143  3e-33  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_008043  TM1040_3658  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
245 aa  142  7e-33  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_0637  ABC transporter, permease  34.29 
 
 
250 aa  140  1.9999999999999998e-32  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00537874  n/a   
 
 
-
 
NC_011725  BCB4264_A0784  putative ABC transporter, permease protein  33.88 
 
 
250 aa  140  1.9999999999999998e-32  Bacillus cereus B4264  Bacteria  normal  0.605831  n/a   
 
 
-
 
NC_011773  BCAH820_0804  putative ABC transporter, permease protein  34.29 
 
 
250 aa  139  3e-32  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.22036e-46 
 
 
-
 
NC_005945  BAS0693  ABC transporter permease  34.29 
 
 
250 aa  139  3e-32  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0637  ABC transporter, permease  34.29 
 
 
250 aa  140  3e-32  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0727  ABC transporter permease  34.29 
 
 
250 aa  139  3e-32  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0363276  n/a   
 
 
-
 
NC_009921  Franean1_3131  binding-protein-dependent transport systems inner membrane component  35.09 
 
 
281 aa  139  3.9999999999999997e-32  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7629  putative ABC transporter permease protein  36.09 
 
 
282 aa  139  3.9999999999999997e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.262472  normal  0.441686 
 
 
-
 
NC_009674  Bcer98_0614  binding-protein-dependent transport systems inner membrane component  34.68 
 
 
250 aa  139  3.9999999999999997e-32  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4547  putative ABC transporter, permease protein  33.88 
 
 
251 aa  139  6e-32  Bacillus cereus G9842  Bacteria  normal  0.113137  normal  0.441246 
 
 
-
 
NC_010184  BcerKBAB4_0643  binding-protein-dependent transport systems inner membrane component  35.08 
 
 
251 aa  138  7e-32  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0881  putative ABC transporter, permease protein  33.88 
 
 
251 aa  138  7e-32  Bacillus cereus AH187  Bacteria  hitchhiker  0.00328051  n/a   
 
 
-
 
NC_010511  M446_0770  binding-protein-dependent transport systems inner membrane component  37.77 
 
 
273 aa  137  2e-31  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_2703  binding-protein-dependent transport systems inner membrane component  32.3 
 
 
263 aa  135  8e-31  Marinomonas sp. MWYL1  Bacteria  normal  0.88688  normal 
 
 
-
 
NC_009952  Dshi_0906  binding-protein-dependent transport systems inner membrane component  37.22 
 
 
244 aa  134  9e-31  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.53091  normal 
 
 
-
 
NC_008709  Ping_2376  ABC transporter substrate binding inner membrane protein  35.02 
 
 
265 aa  134  9.999999999999999e-31  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_2867  binding-protein-dependent transport systems inner membrane component  33.6 
 
 
277 aa  134  1.9999999999999998e-30  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_0814  binding-protein-dependent transport systems inner membrane component  36 
 
 
270 aa  133  1.9999999999999998e-30  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2116  binding-protein-dependent transport systems inner membrane component  35.62 
 
 
253 aa  134  1.9999999999999998e-30  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_1393  binding-protein-dependent transport systems inner membrane component  34.08 
 
 
254 aa  134  1.9999999999999998e-30  Meiothermus ruber DSM 1279  Bacteria  normal  0.302994  normal  0.157809 
 
 
-
 
NC_012791  Vapar_3961  binding-protein-dependent transport systems inner membrane component  32.22 
 
 
256 aa  132  3.9999999999999996e-30  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0354  ABC transporter, permease  31.22 
 
 
265 aa  132  3.9999999999999996e-30  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009669  Oant_4580  binding-protein-dependent transport systems inner membrane component  38.29 
 
 
257 aa  132  3.9999999999999996e-30  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3093  binding-protein dependent transport system inner membrane protein  37.61 
 
 
259 aa  132  3.9999999999999996e-30  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.942666 
 
 
-
 
NC_013223  Dret_2296  binding-protein-dependent transport systems inner membrane component  40.27 
 
 
250 aa  132  3.9999999999999996e-30  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS0367  ABC transporter permease  31.22 
 
 
265 aa  132  6e-30  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0357  ABC transporter, permease  31.22 
 
 
265 aa  132  6e-30  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0381  ABC transporter permease  31.22 
 
 
257 aa  132  6e-30  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4878  putative ABC transporter, permease protein  31.22 
 
 
255 aa  132  6e-30  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  36.24 
 
 
273 aa  132  6e-30  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0446  putative ABC transporter, permease protein  31.22 
 
 
257 aa  132  6e-30  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0424  putative ABC transporter, permease protein  31.22 
 
 
257 aa  132  6e-30  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_003909  BCE_0491  ABC transporter, permease protein, putative  31.98 
 
 
257 aa  132  6.999999999999999e-30  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_5406  ABC transporter membrane spanning protein  36.44 
 
 
251 aa  131  9e-30  Agrobacterium vitis S4  Bacteria  normal  0.408693  n/a   
 
 
-
 
NC_011658  BCAH187_A0493  putative ABC transporter, permease protein  31.98 
 
 
257 aa  131  9e-30  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0362  binding-protein-dependent transport systems inner membrane component  30.67 
 
 
255 aa  130  1.0000000000000001e-29  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000865  hydroxymethylpyrimidine ABC transporter transmembrane component  34.03 
 
 
266 aa  130  2.0000000000000002e-29  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_3877  binding-protein-dependent transport systems inner membrane component  43.75 
 
 
282 aa  130  3e-29  Salinispora tropica CNB-440  Bacteria  normal  0.901388  normal 
 
 
-
 
NC_009832  Spro_3124  binding-protein-dependent transport systems inner membrane component  39.51 
 
 
255 aa  129  4.0000000000000003e-29  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1095  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
255 aa  129  4.0000000000000003e-29  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008686  Pden_0033  binding-protein-dependent transport systems inner membrane component  37.34 
 
 
243 aa  129  6e-29  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_0370  binding-protein-dependent transport systems inner membrane component  31.98 
 
 
256 aa  129  6e-29  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_4268  binding-protein-dependent transport systems inner membrane component  40.51 
 
 
282 aa  128  7.000000000000001e-29  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0113678 
 
 
-
 
NC_011369  Rleg2_3645  binding-protein-dependent transport systems inner membrane component  36.98 
 
 
268 aa  128  9.000000000000001e-29  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_06840  ABC-type nitrate/sulfonate/bicarbonate transport system permease component  33.19 
 
 
266 aa  127  1.0000000000000001e-28  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009952  Dshi_2545  binding-protein-dependent transport system protein  37.31 
 
 
287 aa  127  2.0000000000000002e-28  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.240068  normal  0.521676 
 
 
-
 
NC_013517  Sterm_2064  binding-protein-dependent transport systems inner membrane component  30.45 
 
 
254 aa  126  4.0000000000000003e-28  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.00112586  n/a   
 
 
-
 
NC_007802  Jann_3753  binding-protein-dependent transport systems inner membrane component  34.53 
 
 
268 aa  125  8.000000000000001e-28  Jannaschia sp. CCS1  Bacteria  normal  0.333865  normal 
 
 
-
 
NC_008148  Rxyl_2084  binding-protein-dependent transport systems inner membrane component  41.01 
 
 
260 aa  125  8.000000000000001e-28  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.566245  n/a   
 
 
-
 
NC_009524  PsycPRwf_1445  binding-protein-dependent transport systems inner membrane component  32.08 
 
 
259 aa  124  1e-27  Psychrobacter sp. PRwf-1  Bacteria  normal  normal  0.318112 
 
 
-
 
NC_013525  Tter_0403  binding-protein-dependent transport systems inner membrane component  35.75 
 
 
271 aa  124  2e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008786  Veis_3506  binding-protein-dependent transport systems inner membrane component  34.53 
 
 
282 aa  124  2e-27  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0528385  normal  0.0939424 
 
 
-
 
NC_012850  Rleg_3934  binding-protein-dependent transport systems inner membrane component  34.39 
 
 
278 aa  123  3e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.421742  normal 
 
 
-
 
NC_013739  Cwoe_3810  binding-protein-dependent transport systems inner membrane component  33.65 
 
 
258 aa  122  4e-27  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.42897 
 
 
-
 
NC_013173  Dbac_0926  binding-protein-dependent transport systems inner membrane component  36.2 
 
 
249 aa  122  4e-27  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.04587  n/a   
 
 
-
 
NC_013739  Cwoe_1643  binding-protein-dependent transport systems inner membrane component  39.46 
 
 
259 aa  122  4e-27  Conexibacter woesei DSM 14684  Bacteria  normal  0.805205  normal  0.60128 
 
 
-
 
NC_008752  Aave_1091  binding-protein-dependent transport systems inner membrane component  31.47 
 
 
258 aa  122  5e-27  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0347556  normal 
 
 
-
 
NC_013235  Namu_1668  binding-protein-dependent transport systems inner membrane component  32.46 
 
 
288 aa  122  6e-27  Nakamurella multipartita DSM 44233  Bacteria  normal  0.173855  normal  0.365472 
 
 
-
 
NC_011313  VSAL_II0488  putative binding protein-dependent transport system, membrane component  35.25 
 
 
272 aa  122  6e-27  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.970837  n/a   
 
 
-
 
NC_007963  Csal_1933  binding-protein-dependent transport systems inner membrane component  36 
 
 
255 aa  122  6e-27  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.323499  n/a   
 
 
-
 
NC_010002  Daci_1140  binding-protein-dependent transport systems inner membrane component  33.95 
 
 
255 aa  122  7e-27  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_0111  ABC transporter related  38.64 
 
 
493 aa  122  8e-27  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_0654  ABC transporter, permease protein  29.24 
 
 
263 aa  121  9e-27  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_009667  Oant_0278  binding-protein-dependent transport systems inner membrane component  34.23 
 
 
258 aa  121  9.999999999999999e-27  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_0394  binding-protein-dependent transport systems inner membrane component  32.86 
 
 
259 aa  120  1.9999999999999998e-26  Cupriavidus metallidurans CH34  Bacteria  normal  hitchhiker  0.00657833 
 
 
-
 
NC_010511  M446_3606  binding-protein-dependent transport systems inner membrane component  32.27 
 
 
257 aa  120  1.9999999999999998e-26  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.071611 
 
 
-
 
NC_008148  Rxyl_3035  binding-protein-dependent transport systems inner membrane component  34.03 
 
 
256 aa  120  3e-26  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2127  binding-protein-dependent transport systems inner membrane component  33.48 
 
 
255 aa  120  3e-26  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.427162 
 
 
-
 
NC_009664  Krad_3112  binding-protein-dependent transport systems inner membrane component  37.22 
 
 
253 aa  119  3.9999999999999996e-26  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0371548 
 
 
-
 
NC_009719  Plav_0891  binding-protein-dependent transport systems inner membrane component  34.55 
 
 
268 aa  119  3.9999999999999996e-26  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.223421 
 
 
-
 
NC_004310  BR0211  ABC transporter, permease protein  35.14 
 
 
258 aa  119  6e-26  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_4889  binding-protein-dependent transport systems inner membrane component  34.09 
 
 
258 aa  119  6e-26  Actinosynnema mirum DSM 43827  Bacteria  normal  0.90454  n/a   
 
 
-
 
NC_007493  RSP_0644  ABC transporter, inner membrane subunit  41.43 
 
 
238 aa  118  7e-26  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0435  binding-protein-dependent transport systems inner membrane component  28.22 
 
 
250 aa  118  9.999999999999999e-26  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_1625  binding-protein-dependent transport systems inner membrane component  33.19 
 
 
285 aa  118  9.999999999999999e-26  Trichodesmium erythraeum IMS101  Bacteria  normal  0.0792607  normal  0.95709 
 
 
-
 
NC_010483  TRQ2_0450  binding-protein-dependent transport systems inner membrane component  29.72 
 
 
222 aa  117  9.999999999999999e-26  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_0588  binding-protein-dependent transport systems inner membrane component  37.61 
 
 
238 aa  117  9.999999999999999e-26  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.98825  normal 
 
 
-
 
NC_007643  Rru_A1643  binding-protein dependent transport system inner membrane protein  38.03 
 
 
261 aa  117  1.9999999999999998e-25  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0353041  n/a   
 
 
-
 
NC_013093  Amir_4887  binding-protein-dependent transport systems inner membrane component  34.55 
 
 
267 aa  117  1.9999999999999998e-25  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_2297  binding-protein-dependent transport systems inner membrane component  40.95 
 
 
238 aa  117  1.9999999999999998e-25  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0792355  normal  0.132671 
 
 
-
 
NC_009952  Dshi_1373  binding-protein-dependent transport systems inner membrane component  36 
 
 
303 aa  116  3e-25  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.674946  normal  0.833857 
 
 
-
 
NC_009505  BOV_0202  ABC transporter, permease protein  34.68 
 
 
258 aa  115  5e-25  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2627  binding-protein-dependent transport systems inner membrane component  32.47 
 
 
288 aa  115  6.9999999999999995e-25  Actinosynnema mirum DSM 43827  Bacteria  normal  0.752734  n/a   
 
 
-
 
NC_011894  Mnod_3419  binding-protein-dependent transport systems inner membrane component  34.23 
 
 
258 aa  114  1.0000000000000001e-24  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.121812  n/a   
 
 
-
 
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