More than 300 homologs were found in PanDaTox collection
for query gene Rxyl_3035 on replicon NC_008148
Organism: Rubrobacter xylanophilus DSM 9941



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008148  Rxyl_3035  binding-protein-dependent transport systems inner membrane component  100 
 
 
256 aa  497  1e-140  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_2761  binding-protein-dependent transport systems inner membrane component  57.64 
 
 
258 aa  221  8e-57  Conexibacter woesei DSM 14684  Bacteria  normal  0.165765  normal  0.0247635 
 
 
-
 
NC_013525  Tter_1221  binding-protein-dependent transport systems inner membrane component  34.58 
 
 
246 aa  152  5e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007802  Jann_3753  binding-protein-dependent transport systems inner membrane component  37.79 
 
 
268 aa  150  1e-35  Jannaschia sp. CCS1  Bacteria  normal  0.333865  normal 
 
 
-
 
NC_008786  Veis_3506  binding-protein-dependent transport systems inner membrane component  34.18 
 
 
282 aa  143  2e-33  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0528385  normal  0.0939424 
 
 
-
 
NC_013203  Apar_0391  binding-protein-dependent transport systems inner membrane component  29.8 
 
 
257 aa  140  1.9999999999999998e-32  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_2703  binding-protein-dependent transport systems inner membrane component  33.47 
 
 
263 aa  140  1.9999999999999998e-32  Marinomonas sp. MWYL1  Bacteria  normal  0.88688  normal 
 
 
-
 
NC_009253  Dred_3205  binding-protein-dependent transport systems inner membrane component  33.05 
 
 
265 aa  139  3e-32  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.000457845  n/a   
 
 
-
 
NC_013517  Sterm_2064  binding-protein-dependent transport systems inner membrane component  32.27 
 
 
254 aa  137  2e-31  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.00112586  n/a   
 
 
-
 
NC_008148  Rxyl_3036  binding-protein-dependent transport systems inner membrane component  33.47 
 
 
266 aa  135  7.000000000000001e-31  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3810  binding-protein-dependent transport systems inner membrane component  33.18 
 
 
258 aa  133  1.9999999999999998e-30  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.42897 
 
 
-
 
NC_012791  Vapar_1862  binding-protein-dependent transport systems inner membrane component  34.76 
 
 
257 aa  133  1.9999999999999998e-30  Variovorax paradoxus S110  Bacteria  normal  0.116723  n/a   
 
 
-
 
NC_008786  Veis_0620  binding-protein-dependent transport systems inner membrane component  34.5 
 
 
254 aa  132  3.9999999999999996e-30  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.63161  normal 
 
 
-
 
NC_013739  Cwoe_4254  binding-protein-dependent transport systems inner membrane component  31.82 
 
 
283 aa  131  1.0000000000000001e-29  Conexibacter woesei DSM 14684  Bacteria  normal  0.0441349  normal  0.902161 
 
 
-
 
NC_013457  VEA_000865  hydroxymethylpyrimidine ABC transporter transmembrane component  32.33 
 
 
266 aa  127  2.0000000000000002e-28  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2116  binding-protein-dependent transport systems inner membrane component  30.83 
 
 
253 aa  127  2.0000000000000002e-28  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  31.82 
 
 
273 aa  123  2e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009669  Oant_4580  binding-protein-dependent transport systems inner membrane component  32.76 
 
 
257 aa  123  3e-27  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_012852  Rleg_6281  binding-protein-dependent transport systems inner membrane component  32.13 
 
 
256 aa  122  6e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.783663  normal 
 
 
-
 
NC_007509  Bcep18194_C7650  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  35.71 
 
 
247 aa  121  9e-27  Burkholderia sp. 383  Bacteria  normal  0.621765  normal 
 
 
-
 
NC_009784  VIBHAR_06840  ABC-type nitrate/sulfonate/bicarbonate transport system permease component  30.8 
 
 
266 aa  121  9.999999999999999e-27  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010511  M446_0770  binding-protein-dependent transport systems inner membrane component  33.05 
 
 
273 aa  121  9.999999999999999e-27  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_0278  binding-protein-dependent transport systems inner membrane component  32.76 
 
 
258 aa  120  1.9999999999999998e-26  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  38.5 
 
 
261 aa  120  1.9999999999999998e-26  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_011988  Avi_5406  ABC transporter membrane spanning protein  33.19 
 
 
251 aa  120  1.9999999999999998e-26  Agrobacterium vitis S4  Bacteria  normal  0.408693  n/a   
 
 
-
 
NC_009485  BBta_7629  putative ABC transporter permease protein  30.47 
 
 
282 aa  120  1.9999999999999998e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.262472  normal  0.441686 
 
 
-
 
NC_013165  Shel_13670  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  29.96 
 
 
249 aa  120  1.9999999999999998e-26  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_2762  binding-protein-dependent transport systems inner membrane component  35.75 
 
 
250 aa  120  1.9999999999999998e-26  Conexibacter woesei DSM 14684  Bacteria  normal  0.0247808  normal  0.0244453 
 
 
-
 
NC_012792  Vapar_6052  binding-protein-dependent transport systems inner membrane component  33.18 
 
 
274 aa  120  1.9999999999999998e-26  Variovorax paradoxus S110  Bacteria  normal  0.0454164  n/a   
 
 
-
 
NC_010681  Bphyt_1488  binding-protein-dependent transport systems inner membrane component  34.03 
 
 
247 aa  120  3e-26  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_004310  BR0211  ABC transporter, permease protein  32.17 
 
 
258 aa  119  3.9999999999999996e-26  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2376  ABC transporter substrate binding inner membrane protein  29.61 
 
 
265 aa  119  6e-26  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_011313  VSAL_II0488  putative binding protein-dependent transport system, membrane component  32.92 
 
 
272 aa  119  7e-26  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.970837  n/a   
 
 
-
 
NC_007963  Csal_1933  binding-protein-dependent transport systems inner membrane component  31.6 
 
 
255 aa  118  7.999999999999999e-26  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.323499  n/a   
 
 
-
 
NC_011830  Dhaf_0877  binding-protein-dependent transport systems inner membrane component  28.81 
 
 
260 aa  118  9e-26  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.00000000112184  n/a   
 
 
-
 
NC_007778  RPB_3093  binding-protein dependent transport system inner membrane protein  31.95 
 
 
259 aa  118  9e-26  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.942666 
 
 
-
 
NC_013515  Smon_0476  binding-protein-dependent transport systems inner membrane component  31.17 
 
 
249 aa  118  9e-26  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_011365  Gdia_3269  binding-protein-dependent transport systems inner membrane component  33.48 
 
 
253 aa  116  3e-25  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.283078  normal 
 
 
-
 
NC_009524  PsycPRwf_1445  binding-protein-dependent transport systems inner membrane component  28.27 
 
 
259 aa  115  6e-25  Psychrobacter sp. PRwf-1  Bacteria  normal  normal  0.318112 
 
 
-
 
NC_009505  BOV_0202  ABC transporter, permease protein  31.74 
 
 
258 aa  115  6e-25  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0403  binding-protein-dependent transport systems inner membrane component  33.61 
 
 
271 aa  115  6.9999999999999995e-25  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009832  Spro_3124  binding-protein-dependent transport systems inner membrane component  33.03 
 
 
255 aa  114  2.0000000000000002e-24  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_008043  TM1040_3658  binding-protein-dependent transport systems inner membrane component  31.42 
 
 
245 aa  113  3e-24  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0891  binding-protein-dependent transport systems inner membrane component  32.3 
 
 
268 aa  113  4.0000000000000004e-24  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.223421 
 
 
-
 
NC_010001  Cphy_1151  binding-protein-dependent transport systems inner membrane component  28.45 
 
 
254 aa  113  4.0000000000000004e-24  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_3299  putative sulfonate ABC transporter, permease protein  31.65 
 
 
286 aa  112  6e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.201269  normal  0.262094 
 
 
-
 
NC_012850  Rleg_3934  binding-protein-dependent transport systems inner membrane component  32.07 
 
 
278 aa  112  8.000000000000001e-24  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.421742  normal 
 
 
-
 
NC_007778  RPB_3118  binding-protein dependent transport system inner membrane protein  31.47 
 
 
284 aa  111  9e-24  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_02100  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  32.54 
 
 
308 aa  111  9e-24  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_0033  binding-protein-dependent transport systems inner membrane component  33.18 
 
 
243 aa  110  2.0000000000000002e-23  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_3419  binding-protein-dependent transport systems inner membrane component  31.53 
 
 
258 aa  110  2.0000000000000002e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.121812  n/a   
 
 
-
 
NC_014210  Ndas_4504  binding-protein-dependent transport systems inner membrane component  32.94 
 
 
281 aa  110  2.0000000000000002e-23  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009486  Tpet_0435  binding-protein-dependent transport systems inner membrane component  26.75 
 
 
250 aa  110  2.0000000000000002e-23  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0637  ABC transporter, permease  33.33 
 
 
250 aa  110  3e-23  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00537874  n/a   
 
 
-
 
NC_009664  Krad_3112  binding-protein-dependent transport systems inner membrane component  30.83 
 
 
253 aa  109  4.0000000000000004e-23  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0371548 
 
 
-
 
NC_010511  M446_3606  binding-protein-dependent transport systems inner membrane component  28.92 
 
 
257 aa  109  4.0000000000000004e-23  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.071611 
 
 
-
 
NC_006274  BCZK0637  ABC transporter, permease  32.84 
 
 
250 aa  109  5e-23  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0926  binding-protein-dependent transport systems inner membrane component  32.73 
 
 
249 aa  108  6e-23  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.04587  n/a   
 
 
-
 
NC_011773  BCAH820_0804  putative ABC transporter, permease protein  32.84 
 
 
250 aa  108  7.000000000000001e-23  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.22036e-46 
 
 
-
 
NC_005945  BAS0693  ABC transporter permease  32.84 
 
 
250 aa  108  7.000000000000001e-23  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0727  ABC transporter permease  32.84 
 
 
250 aa  108  7.000000000000001e-23  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0363276  n/a   
 
 
-
 
NC_009952  Dshi_1373  binding-protein-dependent transport systems inner membrane component  29.92 
 
 
303 aa  108  7.000000000000001e-23  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.674946  normal  0.833857 
 
 
-
 
NC_011831  Cagg_1308  binding-protein-dependent transport systems inner membrane component  38.64 
 
 
254 aa  108  1e-22  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.0000169849 
 
 
-
 
NC_007643  Rru_A1643  binding-protein dependent transport system inner membrane protein  38.32 
 
 
261 aa  108  1e-22  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0353041  n/a   
 
 
-
 
NC_009668  Oant_3871  binding-protein-dependent transport systems inner membrane component  31.6 
 
 
280 aa  108  1e-22  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.208081  n/a   
 
 
-
 
NC_013223  Dret_2296  binding-protein-dependent transport systems inner membrane component  32.47 
 
 
250 aa  107  1e-22  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A0784  putative ABC transporter, permease protein  33.33 
 
 
250 aa  107  2e-22  Bacillus cereus B4264  Bacteria  normal  0.605831  n/a   
 
 
-
 
NC_009952  Dshi_0906  binding-protein-dependent transport systems inner membrane component  32.89 
 
 
244 aa  107  2e-22  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.53091  normal 
 
 
-
 
NC_013440  Hoch_2033  binding-protein-dependent transport systems inner membrane component  34.97 
 
 
275 aa  107  2e-22  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0253714  normal  0.258175 
 
 
-
 
NC_010184  BcerKBAB4_0362  binding-protein-dependent transport systems inner membrane component  26.32 
 
 
255 aa  107  3e-22  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0881  putative ABC transporter, permease protein  32.8 
 
 
251 aa  106  3e-22  Bacillus cereus AH187  Bacteria  hitchhiker  0.00328051  n/a   
 
 
-
 
NC_011369  Rleg2_3645  binding-protein-dependent transport systems inner membrane component  33.05 
 
 
268 aa  106  3e-22  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009050  Rsph17029_3665  binding-protein-dependent transport systems inner membrane component  36.73 
 
 
507 aa  106  3e-22  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.701214  normal  0.0728471 
 
 
-
 
NC_013235  Namu_1668  binding-protein-dependent transport systems inner membrane component  28.86 
 
 
288 aa  106  4e-22  Nakamurella multipartita DSM 44233  Bacteria  normal  0.173855  normal  0.365472 
 
 
-
 
NC_009428  Rsph17025_0588  binding-protein-dependent transport systems inner membrane component  33.05 
 
 
238 aa  106  4e-22  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.98825  normal 
 
 
-
 
NC_006274  BCZK0354  ABC transporter, permease  25.91 
 
 
265 aa  106  5e-22  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0643  binding-protein-dependent transport systems inner membrane component  31.86 
 
 
251 aa  106  5e-22  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4547  putative ABC transporter, permease protein  32.8 
 
 
251 aa  105  6e-22  Bacillus cereus G9842  Bacteria  normal  0.113137  normal  0.441246 
 
 
-
 
NC_013946  Mrub_1393  binding-protein-dependent transport systems inner membrane component  30.51 
 
 
254 aa  105  6e-22  Meiothermus ruber DSM 1279  Bacteria  normal  0.302994  normal  0.157809 
 
 
-
 
NC_003909  BCE_0797  ABC transporter, permease protein, putative  32.8 
 
 
250 aa  105  7e-22  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0450  binding-protein-dependent transport systems inner membrane component  27.23 
 
 
222 aa  105  7e-22  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0452  binding-protein-dependent transport systems inner membrane component  29.15 
 
 
252 aa  105  7e-22  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.0467336 
 
 
-
 
NC_009667  Oant_0344  binding-protein-dependent transport systems inner membrane component  28.98 
 
 
286 aa  105  9e-22  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.113814  n/a   
 
 
-
 
NC_003909  BCE_0491  ABC transporter, permease protein, putative  25.91 
 
 
257 aa  104  1e-21  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0367  ABC transporter permease  25.91 
 
 
265 aa  104  1e-21  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0357  ABC transporter, permease  25.91 
 
 
265 aa  104  1e-21  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1643  binding-protein-dependent transport systems inner membrane component  34.25 
 
 
259 aa  104  1e-21  Conexibacter woesei DSM 14684  Bacteria  normal  0.805205  normal  0.60128 
 
 
-
 
NC_007530  GBAA_0381  ABC transporter permease  25.91 
 
 
257 aa  104  1e-21  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_1883  binding-protein-dependent transport systems inner membrane component  31.22 
 
 
322 aa  104  1e-21  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.167871 
 
 
-
 
NC_011773  BCAH820_0424  putative ABC transporter, permease protein  25.91 
 
 
257 aa  104  1e-21  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_009485  BBta_1169  putative ABC transporter permease protein  29.27 
 
 
279 aa  104  1e-21  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A0493  putative ABC transporter, permease protein  25.91 
 
 
257 aa  104  1e-21  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_3758  binding-protein-dependent transport systems inner membrane component  28.7 
 
 
256 aa  103  2e-21  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B4878  putative ABC transporter, permease protein  25.51 
 
 
255 aa  103  2e-21  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2099  binding-protein-dependent transport systems inner membrane component  31.86 
 
 
306 aa  104  2e-21  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_3017  binding-protein-dependent transport systems inner membrane component  31.25 
 
 
253 aa  103  3e-21  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.946292  normal 
 
 
-
 
NC_008312  Tery_1625  binding-protein-dependent transport systems inner membrane component  26.67 
 
 
285 aa  103  3e-21  Trichodesmium erythraeum IMS101  Bacteria  normal  0.0792607  normal  0.95709 
 
 
-
 
NC_009921  Franean1_5688  binding-protein-dependent transport systems inner membrane component  31.31 
 
 
284 aa  103  4e-21  Frankia sp. EAN1pec  Bacteria  normal  0.748678  normal 
 
 
-
 
NC_011725  BCB4264_A0446  putative ABC transporter, permease protein  24.8 
 
 
257 aa  102  5e-21  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2084  binding-protein-dependent transport systems inner membrane component  36.42 
 
 
260 aa  102  5e-21  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.566245  n/a   
 
 
-
 
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