Gene Rxyl_3035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_3035 
Symbol 
ID4115970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp3042841 
End bp3043611 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content51% 
IMG OID638037804 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_645756 
Protein GI108805819 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTACC GTCGCTCATG GATTATCTCA GTAATAATAT ATTTGATCCT GTTGGTGATT 
TGGGAGCTAA TAGCGCGTGC AAATACCCAA CCAGGTAGCC TCTGGCCATC TCCTGTGACC
GTGGCTGAAG TTCTCTGGGA AGAACGGGAA ACCTTCGTAT CAAACGCCGC GGTCACTCTC
ACGGAGGCTA CCCTTGGTTT CGTGGGCGGC GTTATTCTTG CGGCGTTGTT CTCCTTACTT
TCAATGTTTT CTAGACCTTT GGGAGACAAT CTGTACCGTT TGTCGCTGGT GCTCTACGGC
CTACCTCTAA TAGCTGTTGC ACCATTGCTT GTGGTCTGGA TAGGACCGGG GCTTTGGACC
AAAGTTATAA TCGCCTTACT AGCCTCATTT TTCCCGGTTC TCGTCAACAC GACGCAGGCA
ATACGTCATA CCGACCCAAA GGCTATCGAA ATGATGGACT CTCTAGGAGC CTCAAGACTC
CAGACCCTCT GGAGAGTTCG TCTACCATAT GCGCTGCCCG CGCTAATAGC GTCGTTCAAG
GTCGCAGGGC CTGGAGCCAT TATAGGAGCA ATGCTCGCTG AATGGGTAGG AGCGGAGAAA
GGCTTGGGGC TGTTAGTTCT GTTTTCAATG TTCAGCTACC TGATTCCGCT GCTCTGGGCT
ACTCTCATCG TCTCTAGTGC CCTTTCTCTA ACCGTCTACT ATACGTTTGA GTGGGTCGGC
AGGCGTCTGT TCCCTTGGCA CCCTTCCTCT CAACGAATTG AGGAACTGTA G
 
Protein sequence
MSYRRSWIIS VIIYLILLVI WELIARANTQ PGSLWPSPVT VAEVLWEERE TFVSNAAVTL 
TEATLGFVGG VILAALFSLL SMFSRPLGDN LYRLSLVLYG LPLIAVAPLL VVWIGPGLWT
KVIIALLASF FPVLVNTTQA IRHTDPKAIE MMDSLGASRL QTLWRVRLPY ALPALIASFK
VAGPGAIIGA MLAEWVGAEK GLGLLVLFSM FSYLIPLLWA TLIVSSALSL TVYYTFEWVG
RRLFPWHPSS QRIEEL