Gene Tery_1625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1625 
Symbol 
ID4242409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2483205 
End bp2484062 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content31% 
IMG OID638106766 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_721376 
Protein GI113475315 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0792607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.95709 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGTC TTATTACAAA AAATAATCTA CAAAAATTAA TACAAAAAAA ATCACAAAAT 
CGAATCCTAA ATAAGCTATT TTCGATTGAT ATAATTGCTC CTGTAATTTT AGGAATTATT
GTATTACTCA CATGGGAAAT TTCGGTAGAG AAGATGAATA TTCCTCCCTA TTTACTGCCT
GGACCGATAT TAGTAATCAA GACTATGATT CAGGAATGGA ATGCATTATT TATGTCTTTA
ATAACAACTA TAAAAATTAC AGTTGTTGCT TTGGTAGTAG CAGTAAGTTC TGGGGTATTG
ATTTCGATAT TATTTGCTCA GAATAAATTA ATTGAAAGAA GCTTATTTCC TTATGCAGTA
ATTTTACAGA CTACTCCTAT TGTGGCTATC TCTCCTTTGA TTATTATATG GCTCAGAGAT
AATACTTTTG GCGCATTAAT TCTTTGTGCT TGGATTGTAG CATTTTTTCC AATTATTTCT
AATACAACTT TAGGATTAAA TAGCGTTGAT AAAAATTTGA GCGATATGTT TAAATTATAT
GGAGCTTCTC CTTGGCAAAC TCTAATTTAT TTGAGATTTC CTAGTGCTTT ACCTTATTTT
TTAGGAGGGT TAAGAATTAG TGGTGGTTTG GCATTAATTG GGGCAGTAGT AGCTGAATTT
GTGGCAGGTA CTGGAGGCAC TAGGTCTGGC ATTGCTTATC AGATTTTAAT GTCTAGTTAT
AATTTGCAAA TTCCGAGAAT GTTTGCTGCT TTATTCTTGA CGACAGGTTT AGGGATAGCT
ATTTTTGTAT TTTTCACAGT TTTATCAGAT TATTTGTTAA AAGATTGGCA TGAAAGTGCG
GTAAAAAAAG ATAGTTAA
 
Protein sequence
MPSLITKNNL QKLIQKKSQN RILNKLFSID IIAPVILGII VLLTWEISVE KMNIPPYLLP 
GPILVIKTMI QEWNALFMSL ITTIKITVVA LVVAVSSGVL ISILFAQNKL IERSLFPYAV
ILQTTPIVAI SPLIIIWLRD NTFGALILCA WIVAFFPIIS NTTLGLNSVD KNLSDMFKLY
GASPWQTLIY LRFPSALPYF LGGLRISGGL ALIGAVVAEF VAGTGGTRSG IAYQILMSSY
NLQIPRMFAA LFLTTGLGIA IFVFFTVLSD YLLKDWHESA VKKDS