Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_1625 |
Symbol | |
ID | 4242409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 2483205 |
End bp | 2484062 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638106766 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_721376 |
Protein GI | 113475315 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0792607 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.95709 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAGTC TTATTACAAA AAATAATCTA CAAAAATTAA TACAAAAAAA ATCACAAAAT CGAATCCTAA ATAAGCTATT TTCGATTGAT ATAATTGCTC CTGTAATTTT AGGAATTATT GTATTACTCA CATGGGAAAT TTCGGTAGAG AAGATGAATA TTCCTCCCTA TTTACTGCCT GGACCGATAT TAGTAATCAA GACTATGATT CAGGAATGGA ATGCATTATT TATGTCTTTA ATAACAACTA TAAAAATTAC AGTTGTTGCT TTGGTAGTAG CAGTAAGTTC TGGGGTATTG ATTTCGATAT TATTTGCTCA GAATAAATTA ATTGAAAGAA GCTTATTTCC TTATGCAGTA ATTTTACAGA CTACTCCTAT TGTGGCTATC TCTCCTTTGA TTATTATATG GCTCAGAGAT AATACTTTTG GCGCATTAAT TCTTTGTGCT TGGATTGTAG CATTTTTTCC AATTATTTCT AATACAACTT TAGGATTAAA TAGCGTTGAT AAAAATTTGA GCGATATGTT TAAATTATAT GGAGCTTCTC CTTGGCAAAC TCTAATTTAT TTGAGATTTC CTAGTGCTTT ACCTTATTTT TTAGGAGGGT TAAGAATTAG TGGTGGTTTG GCATTAATTG GGGCAGTAGT AGCTGAATTT GTGGCAGGTA CTGGAGGCAC TAGGTCTGGC ATTGCTTATC AGATTTTAAT GTCTAGTTAT AATTTGCAAA TTCCGAGAAT GTTTGCTGCT TTATTCTTGA CGACAGGTTT AGGGATAGCT ATTTTTGTAT TTTTCACAGT TTTATCAGAT TATTTGTTAA AAGATTGGCA TGAAAGTGCG GTAAAAAAAG ATAGTTAA
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Protein sequence | MPSLITKNNL QKLIQKKSQN RILNKLFSID IIAPVILGII VLLTWEISVE KMNIPPYLLP GPILVIKTMI QEWNALFMSL ITTIKITVVA LVVAVSSGVL ISILFAQNKL IERSLFPYAV ILQTTPIVAI SPLIIIWLRD NTFGALILCA WIVAFFPIIS NTTLGLNSVD KNLSDMFKLY GASPWQTLIY LRFPSALPYF LGGLRISGGL ALIGAVVAEF VAGTGGTRSG IAYQILMSSY NLQIPRMFAA LFLTTGLGIA IFVFFTVLSD YLLKDWHESA VKKDS
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