Gene Namu_1668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1668 
Symbol 
ID8447267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1833386 
End bp1834252 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content72% 
IMG OID645040791 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003201047 
Protein GI258651891 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.173855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.365472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTC GGTCCGAATC GCTGCCCCGC GCCGGCGTCG CCGCCGCGGG GGCGGCGCCG 
GTCGGGCCGG TCGCCCGGTC CCGCGGCCGG CGGCTACTGG CCACGGTCGG CCCGGCCGCC
CTGATCGTCG CGCTGCTGCT GGTCGGCTGG CAGCTCGCGG TGGTGCTGAC CGACGCCCGG
CCGCAGATCC TGCCCTCGCC GTTGCGGGTG GTGCAGCAGG GCTGGCTCAA CCGCGACGAC
CTGACCCGGC ACGGCCTGGC CACCCTGGGC GTCACCCTGG TCGGGTTCAC CGTCTCGCTC
GCGGTGAGCT GGGCCGTCGC CATCACGGTC GACTTCGTGC CGTGGCTGCG CCGGGCCCTG
GTGCCGCTGC TGGTCGGGTC GCAGACCCTG CCGATCATCG CGATCGCCCC GCTGATGATC
ATCTGGTTCG GCTTCGGACT GCTGCCCAAG GTGCTGGTGA TCATCCTGAC CACCTTCTTC
CCGGTGGCCA TCGGGCTGAT CGAGGGCTTC TCCAGCGCGG ACCGGGAGAC CGGGCGGCTG
CTGGCCTCGA TGGGCGCCTC CCGCGGTCAG CAGTTCCGGT ACCTGCGGCT GCCCGGCGCC
ATGCCCCGGT TCTTCACCGC GCTGCGGATC GGCATCACCT ACGCGGTGGT GGCCGCGATC
TTCGCCGAGT ACGTCGGCGC CACCAGCGGT CTGGGCATCT ACATGAGCAT GCAGAAGAAC
TCCTTCCGCA CCGACCTGGT GCTCGCCGCG GTCGGCGTCA CGGCGATCAT CTCGATCACC
CTGTTCGCGT TGACCTTCCT TCTCGAGCGC CTGGTCTGCC CCTGGCAGCG GGCGTCCCGT
CCGCACCGGG AGACCGGCGG TGGCTGA
 
Protein sequence
MTARSESLPR AGVAAAGAAP VGPVARSRGR RLLATVGPAA LIVALLLVGW QLAVVLTDAR 
PQILPSPLRV VQQGWLNRDD LTRHGLATLG VTLVGFTVSL AVSWAVAITV DFVPWLRRAL
VPLLVGSQTL PIIAIAPLMI IWFGFGLLPK VLVIILTTFF PVAIGLIEGF SSADRETGRL
LASMGASRGQ QFRYLRLPGA MPRFFTALRI GITYAVVAAI FAEYVGATSG LGIYMSMQKN
SFRTDLVLAA VGVTAIISIT LFALTFLLER LVCPWQRASR PHRETGGG