Gene Csal_1933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1933 
Symbol 
ID4025868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2190572 
End bp2191339 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content65% 
IMG OID637967129 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_573984 
Protein GI92114056 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.323499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTTC TCAAGCGCCT CTGGCCGGCC ATGCTCGGCC TCGTTGCCCT GCTAGGGCTA 
TGGCAAGGAC TCGTCGTCGC CACCGGCGTG CCGGGTTACG TACTGCCGTC CCCGCTCGCC
GTGGTGCAAG CCCTCGCCGC CCATCATCAG TTACTCTGGC ATCATACCGG CATCACCGTG
ATCGAGATCG TCGCCGGCCT GTTCATCGGC TGCCTCAGCG GCTTGCTCAC CGCGCTCGCC
CTGGCCCGCT TTCATGGCCT CAGGCGAACC TTGCTGCCGA TCCTGTTGAT CAGCCAGGCC
ATTCCGCTGT TCGCCCTGGC CCCGATTCTC ATGCTATGGC TGGGTTACGG CATGACCGCC
AAGATCGTCA TGGCGACCCT GATCATCTAT TTTCCGGTCG CCTCGACATG TTACGACGGC
TTGCGCCAGA CCCCGCAGGG GTGGCTGGAC CTGGCACAGA CCCTGGGCGC CGACCGCCGC
CGTCGACTGC TGCGCATTCA ATTGCCCGCG GCTCTGCCGG CCCTGGCATC CGGCATGCGC
ATGGCCGCCA GCGCCGCCCC CATCGGTGCC GTGATCGGCG AATGGGTCGG CTCCAGCCAA
GGATTGGGAT ACTTGATGCT CAACGCGAAT GCACGCATGC AAGTCGACCT GATGTTCGCC
GCCTTGCTGA TCCTCGTCAC CTTCGGCGTG GCGCTCTATT TCGCCATGGA CGCCCTGATG
CGCCACCTGA TGCCATGGCA TGAGGACCGC ACCAGCGCCC AAGGCTGA
 
Protein sequence
MTLLKRLWPA MLGLVALLGL WQGLVVATGV PGYVLPSPLA VVQALAAHHQ LLWHHTGITV 
IEIVAGLFIG CLSGLLTALA LARFHGLRRT LLPILLISQA IPLFALAPIL MLWLGYGMTA
KIVMATLIIY FPVASTCYDG LRQTPQGWLD LAQTLGADRR RRLLRIQLPA ALPALASGMR
MAASAAPIGA VIGEWVGSSQ GLGYLMLNAN ARMQVDLMFA ALLILVTFGV ALYFAMDALM
RHLMPWHEDR TSAQG