More than 300 homologs were found in PanDaTox collection
for query gene Amir_2627 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_2627  binding-protein-dependent transport systems inner membrane component  100 
 
 
288 aa  572  1.0000000000000001e-162  Actinosynnema mirum DSM 43827  Bacteria  normal  0.752734  n/a   
 
 
-
 
NC_013521  Sked_02100  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  57.14 
 
 
308 aa  275  7e-73  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4504  binding-protein-dependent transport systems inner membrane component  56.8 
 
 
281 aa  274  1.0000000000000001e-72  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3112  binding-protein-dependent transport systems inner membrane component  57.03 
 
 
253 aa  245  4.9999999999999997e-64  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0371548 
 
 
-
 
NC_009485  BBta_1169  putative ABC transporter permease protein  35.59 
 
 
279 aa  144  2e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009669  Oant_4580  binding-protein-dependent transport systems inner membrane component  37.1 
 
 
257 aa  142  4e-33  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_3753  binding-protein-dependent transport systems inner membrane component  33.94 
 
 
268 aa  140  1.9999999999999998e-32  Jannaschia sp. CCS1  Bacteria  normal  0.333865  normal 
 
 
-
 
NC_010511  M446_0770  binding-protein-dependent transport systems inner membrane component  37.04 
 
 
273 aa  135  7.000000000000001e-31  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3131  binding-protein-dependent transport systems inner membrane component  34.68 
 
 
281 aa  134  1.9999999999999998e-30  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3810  binding-protein-dependent transport systems inner membrane component  32.29 
 
 
258 aa  130  2.0000000000000002e-29  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.42897 
 
 
-
 
NC_013739  Cwoe_4254  binding-protein-dependent transport systems inner membrane component  32.47 
 
 
283 aa  131  2.0000000000000002e-29  Conexibacter woesei DSM 14684  Bacteria  normal  0.0441349  normal  0.902161 
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  35.34 
 
 
273 aa  130  2.0000000000000002e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0403  binding-protein-dependent transport systems inner membrane component  32.18 
 
 
271 aa  129  4.0000000000000003e-29  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_2703  binding-protein-dependent transport systems inner membrane component  30.94 
 
 
263 aa  127  2.0000000000000002e-28  Marinomonas sp. MWYL1  Bacteria  normal  0.88688  normal 
 
 
-
 
NC_011830  Dhaf_0877  binding-protein-dependent transport systems inner membrane component  33.88 
 
 
260 aa  127  3e-28  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.00000000112184  n/a   
 
 
-
 
NC_009719  Plav_0891  binding-protein-dependent transport systems inner membrane component  34.94 
 
 
268 aa  125  8.000000000000001e-28  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.223421 
 
 
-
 
NC_013525  Tter_1221  binding-protein-dependent transport systems inner membrane component  33.19 
 
 
246 aa  125  1e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011988  Avi_5406  ABC transporter membrane spanning protein  33.03 
 
 
251 aa  125  1e-27  Agrobacterium vitis S4  Bacteria  normal  0.408693  n/a   
 
 
-
 
NC_009952  Dshi_1373  binding-protein-dependent transport systems inner membrane component  37.44 
 
 
303 aa  124  2e-27  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.674946  normal  0.833857 
 
 
-
 
NC_010524  Lcho_1095  binding-protein-dependent transport systems inner membrane component  30.61 
 
 
255 aa  123  3e-27  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_013946  Mrub_1393  binding-protein-dependent transport systems inner membrane component  32.77 
 
 
254 aa  123  4e-27  Meiothermus ruber DSM 1279  Bacteria  normal  0.302994  normal  0.157809 
 
 
-
 
NC_012850  Rleg_3934  binding-protein-dependent transport systems inner membrane component  32.08 
 
 
278 aa  122  7e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.421742  normal 
 
 
-
 
NC_008044  TM1040_1494  binding-protein-dependent transport systems inner membrane component  36.6 
 
 
281 aa  121  9.999999999999999e-27  Ruegeria sp. TM1040  Bacteria  normal  0.58323  normal 
 
 
-
 
NC_014212  Mesil_2099  binding-protein-dependent transport systems inner membrane component  33.91 
 
 
306 aa  120  3e-26  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_1382  binding-protein-dependent transport systems inner membrane component  31.6 
 
 
285 aa  119  4.9999999999999996e-26  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.13305  normal 
 
 
-
 
NC_011369  Rleg2_3645  binding-protein-dependent transport systems inner membrane component  32.7 
 
 
268 aa  119  6e-26  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_0620  binding-protein-dependent transport systems inner membrane component  31.58 
 
 
254 aa  119  6e-26  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.63161  normal 
 
 
-
 
NC_009253  Dred_3205  binding-protein-dependent transport systems inner membrane component  29.34 
 
 
265 aa  119  7e-26  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.000457845  n/a   
 
 
-
 
NC_010002  Daci_1140  binding-protein-dependent transport systems inner membrane component  27.27 
 
 
255 aa  118  9.999999999999999e-26  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3093  binding-protein dependent transport system inner membrane protein  30.74 
 
 
259 aa  117  1.9999999999999998e-25  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.942666 
 
 
-
 
NC_011894  Mnod_3419  binding-protein-dependent transport systems inner membrane component  34.23 
 
 
258 aa  117  3e-25  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.121812  n/a   
 
 
-
 
NC_011365  Gdia_3269  binding-protein-dependent transport systems inner membrane component  35.43 
 
 
253 aa  117  3e-25  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.283078  normal 
 
 
-
 
NC_009668  Oant_3871  binding-protein-dependent transport systems inner membrane component  32.8 
 
 
280 aa  115  6e-25  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.208081  n/a   
 
 
-
 
NC_006274  BCZK0354  ABC transporter, permease  28.47 
 
 
265 aa  115  6.9999999999999995e-25  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1862  binding-protein-dependent transport systems inner membrane component  32.74 
 
 
257 aa  115  6.9999999999999995e-25  Variovorax paradoxus S110  Bacteria  normal  0.116723  n/a   
 
 
-
 
NC_013165  Shel_13670  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  30.89 
 
 
249 aa  115  6.9999999999999995e-25  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013515  Smon_0476  binding-protein-dependent transport systems inner membrane component  30.28 
 
 
249 aa  115  6.9999999999999995e-25  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_009674  Bcer98_0370  binding-protein-dependent transport systems inner membrane component  29.54 
 
 
256 aa  115  7.999999999999999e-25  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0801  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  32.2 
 
 
298 aa  115  7.999999999999999e-25  Burkholderia xenovorans LB400  Bacteria  normal  0.0745387  normal 
 
 
-
 
NC_008786  Veis_3506  binding-protein-dependent transport systems inner membrane component  35.11 
 
 
282 aa  115  7.999999999999999e-25  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0528385  normal  0.0939424 
 
 
-
 
NC_010681  Bphyt_1488  binding-protein-dependent transport systems inner membrane component  32.47 
 
 
247 aa  115  7.999999999999999e-25  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  35.05 
 
 
261 aa  115  8.999999999999998e-25  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_011658  BCAH187_A0493  putative ABC transporter, permease protein  29.15 
 
 
257 aa  115  1.0000000000000001e-24  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0491  ABC transporter, permease protein, putative  29.15 
 
 
257 aa  114  2.0000000000000002e-24  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0367  ABC transporter permease  28.1 
 
 
265 aa  114  2.0000000000000002e-24  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0357  ABC transporter, permease  28.1 
 
 
265 aa  114  2.0000000000000002e-24  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_2296  binding-protein-dependent transport systems inner membrane component  32.92 
 
 
250 aa  114  2.0000000000000002e-24  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_6052  binding-protein-dependent transport systems inner membrane component  32.58 
 
 
274 aa  114  2.0000000000000002e-24  Variovorax paradoxus S110  Bacteria  normal  0.0454164  n/a   
 
 
-
 
NC_002947  PP_3210  ABC transporter, permease protein  36.28 
 
 
267 aa  113  3e-24  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_013743  Htur_0669  binding-protein-dependent transport systems inner membrane component  37.04 
 
 
258 aa  113  3e-24  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_007530  GBAA_0381  ABC transporter permease  27.76 
 
 
257 aa  114  3e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0424  putative ABC transporter, permease protein  27.76 
 
 
257 aa  114  3e-24  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011772  BCG9842_B4878  putative ABC transporter, permease protein  27.76 
 
 
255 aa  113  3e-24  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_0394  binding-protein-dependent transport systems inner membrane component  29.63 
 
 
259 aa  113  4.0000000000000004e-24  Cupriavidus metallidurans CH34  Bacteria  normal  hitchhiker  0.00657833 
 
 
-
 
NC_009524  PsycPRwf_1445  binding-protein-dependent transport systems inner membrane component  30.21 
 
 
259 aa  113  4.0000000000000004e-24  Psychrobacter sp. PRwf-1  Bacteria  normal  normal  0.318112 
 
 
-
 
NC_007802  Jann_2700  binding-protein-dependent transport systems inner membrane component  32.26 
 
 
316 aa  112  9e-24  Jannaschia sp. CCS1  Bacteria  normal  0.505407  normal  0.565906 
 
 
-
 
NC_012850  Rleg_3297  binding-protein-dependent transport systems inner membrane component  29.89 
 
 
375 aa  112  9e-24  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.149558 
 
 
-
 
NC_012791  Vapar_3961  binding-protein-dependent transport systems inner membrane component  29.85 
 
 
256 aa  111  1.0000000000000001e-23  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2084  binding-protein-dependent transport systems inner membrane component  37.14 
 
 
260 aa  111  1.0000000000000001e-23  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.566245  n/a   
 
 
-
 
NC_009720  Xaut_3758  binding-protein-dependent transport systems inner membrane component  29.54 
 
 
256 aa  111  1.0000000000000001e-23  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2588  binding-protein-dependent transport systems inner membrane component  35.84 
 
 
267 aa  112  1.0000000000000001e-23  Pseudomonas putida W619  Bacteria  normal  normal  0.417353 
 
 
-
 
NC_010172  Mext_1719  binding-protein-dependent transport systems inner membrane component  31.52 
 
 
264 aa  111  2.0000000000000002e-23  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3181  binding-protein-dependent transport systems inner membrane component  32.1 
 
 
277 aa  111  2.0000000000000002e-23  Burkholderia phymatum STM815  Bacteria  normal  0.0283642  normal 
 
 
-
 
NC_007951  Bxe_A2015  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  32.13 
 
 
252 aa  110  2.0000000000000002e-23  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_2046  binding-protein-dependent transport systems inner membrane component  29.61 
 
 
286 aa  111  2.0000000000000002e-23  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3042  binding-protein-dependent transport systems inner membrane component  32.14 
 
 
375 aa  110  2.0000000000000002e-23  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1091  binding-protein-dependent transport systems inner membrane component  27.71 
 
 
258 aa  110  2.0000000000000002e-23  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0347556  normal 
 
 
-
 
NC_010184  BcerKBAB4_0362  binding-protein-dependent transport systems inner membrane component  27.17 
 
 
255 aa  111  2.0000000000000002e-23  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7650  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  31.3 
 
 
247 aa  110  3e-23  Burkholderia sp. 383  Bacteria  normal  0.621765  normal 
 
 
-
 
NC_012852  Rleg_6281  binding-protein-dependent transport systems inner membrane component  33.68 
 
 
256 aa  110  3e-23  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.783663  normal 
 
 
-
 
NC_011725  BCB4264_A0446  putative ABC transporter, permease protein  27.38 
 
 
257 aa  110  3e-23  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_1263  ABC transporter permease  33.86 
 
 
262 aa  110  3e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.165267 
 
 
-
 
NC_011757  Mchl_2038  binding-protein-dependent transport systems inner membrane component  30.74 
 
 
264 aa  109  4.0000000000000004e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.697058  normal  0.743835 
 
 
-
 
NC_013203  Apar_0391  binding-protein-dependent transport systems inner membrane component  28.63 
 
 
257 aa  109  6e-23  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1883  binding-protein-dependent transport systems inner membrane component  31 
 
 
322 aa  108  8.000000000000001e-23  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.167871 
 
 
-
 
NC_007778  RPB_3118  binding-protein dependent transport system inner membrane protein  32.11 
 
 
284 aa  108  1e-22  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2372  binding-protein-dependent transport systems inner membrane component  32.14 
 
 
289 aa  108  1e-22  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.239724 
 
 
-
 
NC_009012  Cthe_2116  binding-protein-dependent transport systems inner membrane component  27.46 
 
 
253 aa  108  1e-22  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1095  binding-protein-dependent transport systems inner membrane component  31.7 
 
 
264 aa  108  1e-22  Methylobacterium populi BJ001  Bacteria  normal  0.0240883  normal  0.166534 
 
 
-
 
NC_009667  Oant_0344  binding-protein-dependent transport systems inner membrane component  29.66 
 
 
286 aa  107  2e-22  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.113814  n/a   
 
 
-
 
NC_007802  Jann_1473  binding-protein-dependent transport systems inner membrane component  32.52 
 
 
283 aa  107  2e-22  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_3460  ABC transporter membrane spanning protein  31.82 
 
 
288 aa  107  2e-22  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_06840  ABC-type nitrate/sulfonate/bicarbonate transport system permease component  31.08 
 
 
266 aa  107  2e-22  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009428  Rsph17025_1465  binding-protein-dependent transport systems inner membrane component  35.17 
 
 
283 aa  107  2e-22  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4527  binding-protein-dependent transport systems inner membrane component  41.9 
 
 
253 aa  108  2e-22  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4760  binding-protein-dependent transport systems inner membrane component  31.32 
 
 
267 aa  107  3e-22  Variovorax paradoxus S110  Bacteria  normal  0.318809  n/a   
 
 
-
 
NC_013946  Mrub_1076  ABC transporter-like protein  31.44 
 
 
488 aa  107  3e-22  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.276573 
 
 
-
 
NC_009952  Dshi_2545  binding-protein-dependent transport system protein  31.63 
 
 
287 aa  107  3e-22  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.240068  normal  0.521676 
 
 
-
 
NC_013517  Sterm_2064  binding-protein-dependent transport systems inner membrane component  26.48 
 
 
254 aa  106  4e-22  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.00112586  n/a   
 
 
-
 
NC_013457  VEA_000865  hydroxymethylpyrimidine ABC transporter transmembrane component  30.63 
 
 
266 aa  105  6e-22  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3606  binding-protein-dependent transport systems inner membrane component  27.87 
 
 
257 aa  105  6e-22  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.071611 
 
 
-
 
NC_009953  Sare_4268  binding-protein-dependent transport systems inner membrane component  35.33 
 
 
282 aa  105  6e-22  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0113678 
 
 
-
 
NC_007406  Nwi_0333  binding-protein dependent transport system inner membrane protein  33.71 
 
 
278 aa  105  8e-22  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_2376  ABC transporter substrate binding inner membrane protein  27.69 
 
 
265 aa  105  8e-22  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_0278  binding-protein-dependent transport systems inner membrane component  31.44 
 
 
258 aa  105  9e-22  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2867  binding-protein-dependent transport systems inner membrane component  28.33 
 
 
277 aa  105  1e-21  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0669  binding-protein-dependent transport systems inner membrane component  34.7 
 
 
272 aa  105  1e-21  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0848141 
 
 
-
 
NC_008025  Dgeo_0111  ABC transporter related  33.18 
 
 
493 aa  105  1e-21  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_0814  binding-protein-dependent transport systems inner membrane component  26.89 
 
 
270 aa  104  1e-21  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6031  putative ABC transporter, permease protein  32.84 
 
 
325 aa  104  2e-21  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
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