More than 300 homologs were found in PanDaTox collection
for query gene Rru_A1643 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007643  Rru_A1643  binding-protein dependent transport system inner membrane protein  100 
 
 
261 aa  492  9.999999999999999e-139  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0353041  n/a   
 
 
-
 
NC_013173  Dbac_0926  binding-protein-dependent transport systems inner membrane component  65.16 
 
 
249 aa  275  4e-73  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.04587  n/a   
 
 
-
 
NC_009784  VIBHAR_06840  ABC-type nitrate/sulfonate/bicarbonate transport system permease component  56.25 
 
 
266 aa  263  2e-69  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_000865  hydroxymethylpyrimidine ABC transporter transmembrane component  56.72 
 
 
266 aa  260  1e-68  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1933  binding-protein-dependent transport systems inner membrane component  57.56 
 
 
255 aa  251  7e-66  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.323499  n/a   
 
 
-
 
NC_011313  VSAL_II0488  putative binding protein-dependent transport system, membrane component  54.86 
 
 
272 aa  244  6.999999999999999e-64  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.970837  n/a   
 
 
-
 
NC_008709  Ping_2376  ABC transporter substrate binding inner membrane protein  52.52 
 
 
265 aa  244  9.999999999999999e-64  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_3269  binding-protein-dependent transport systems inner membrane component  58.23 
 
 
253 aa  244  9.999999999999999e-64  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.283078  normal 
 
 
-
 
NC_009832  Spro_3124  binding-protein-dependent transport systems inner membrane component  56.88 
 
 
255 aa  228  7e-59  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_004310  BR0211  ABC transporter, permease protein  48.83 
 
 
258 aa  223  3e-57  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_0202  ABC transporter, permease protein  48.83 
 
 
258 aa  221  9.999999999999999e-57  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_008043  TM1040_3658  binding-protein-dependent transport systems inner membrane component  54.95 
 
 
245 aa  218  8.999999999999998e-56  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_0278  binding-protein-dependent transport systems inner membrane component  46.61 
 
 
258 aa  215  5.9999999999999996e-55  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_0906  binding-protein-dependent transport systems inner membrane component  56.31 
 
 
244 aa  211  1e-53  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.53091  normal 
 
 
-
 
NC_008686  Pden_0033  binding-protein-dependent transport systems inner membrane component  53.55 
 
 
243 aa  206  3e-52  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_0588  binding-protein-dependent transport systems inner membrane component  54.01 
 
 
238 aa  190  2e-47  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.98825  normal 
 
 
-
 
NC_012791  Vapar_1862  binding-protein-dependent transport systems inner membrane component  44.49 
 
 
257 aa  188  7e-47  Variovorax paradoxus S110  Bacteria  normal  0.116723  n/a   
 
 
-
 
NC_009049  Rsph17029_2297  binding-protein-dependent transport systems inner membrane component  55.66 
 
 
238 aa  186  2e-46  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0792355  normal  0.132671 
 
 
-
 
NC_007493  RSP_0644  ABC transporter, inner membrane subunit  55.66 
 
 
238 aa  186  3e-46  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_2296  binding-protein-dependent transport systems inner membrane component  46.81 
 
 
250 aa  186  4e-46  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_0620  binding-protein-dependent transport systems inner membrane component  44.65 
 
 
254 aa  184  1.0000000000000001e-45  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.63161  normal 
 
 
-
 
NC_013203  Apar_0391  binding-protein-dependent transport systems inner membrane component  39.83 
 
 
257 aa  174  9e-43  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_013515  Smon_0476  binding-protein-dependent transport systems inner membrane component  36.05 
 
 
249 aa  166  2.9999999999999998e-40  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_011830  Dhaf_0877  binding-protein-dependent transport systems inner membrane component  38.36 
 
 
260 aa  166  5e-40  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.00000000112184  n/a   
 
 
-
 
NC_013525  Tter_1221  binding-protein-dependent transport systems inner membrane component  41.3 
 
 
246 aa  165  6.9999999999999995e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013165  Shel_13670  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  38.71 
 
 
249 aa  161  1e-38  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_6052  binding-protein-dependent transport systems inner membrane component  37.83 
 
 
274 aa  161  1e-38  Variovorax paradoxus S110  Bacteria  normal  0.0454164  n/a   
 
 
-
 
NC_009253  Dred_3205  binding-protein-dependent transport systems inner membrane component  37.6 
 
 
265 aa  160  2e-38  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.000457845  n/a   
 
 
-
 
NC_011772  BCG9842_B4878  putative ABC transporter, permease protein  35.22 
 
 
255 aa  158  8e-38  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_0362  binding-protein-dependent transport systems inner membrane component  35.22 
 
 
255 aa  158  9e-38  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0491  ABC transporter, permease protein, putative  34.78 
 
 
257 aa  157  2e-37  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0367  ABC transporter permease  34.78 
 
 
265 aa  157  2e-37  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0357  ABC transporter, permease  34.78 
 
 
265 aa  157  2e-37  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0381  ABC transporter permease  34.78 
 
 
257 aa  157  2e-37  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0424  putative ABC transporter, permease protein  34.78 
 
 
257 aa  157  2e-37  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011658  BCAH187_A0493  putative ABC transporter, permease protein  34.35 
 
 
257 aa  156  3e-37  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0446  putative ABC transporter, permease protein  34.78 
 
 
257 aa  155  7e-37  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0370  binding-protein-dependent transport systems inner membrane component  34.75 
 
 
256 aa  155  9e-37  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3118  binding-protein dependent transport system inner membrane protein  37.61 
 
 
284 aa  154  1e-36  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK0354  ABC transporter, permease  34.35 
 
 
265 aa  153  2.9999999999999998e-36  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4254  binding-protein-dependent transport systems inner membrane component  38.72 
 
 
283 aa  151  1e-35  Conexibacter woesei DSM 14684  Bacteria  normal  0.0441349  normal  0.902161 
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  37.55 
 
 
261 aa  149  5e-35  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_009524  PsycPRwf_1445  binding-protein-dependent transport systems inner membrane component  34.51 
 
 
259 aa  148  1.0000000000000001e-34  Psychrobacter sp. PRwf-1  Bacteria  normal  normal  0.318112 
 
 
-
 
NC_013093  Amir_4887  binding-protein-dependent transport systems inner membrane component  39.53 
 
 
267 aa  147  2.0000000000000003e-34  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1151  binding-protein-dependent transport systems inner membrane component  33.6 
 
 
254 aa  145  5e-34  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_0620  binding-protein-dependent transport systems inner membrane component  40.25 
 
 
258 aa  142  7e-33  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2084  binding-protein-dependent transport systems inner membrane component  44.55 
 
 
260 aa  140  1.9999999999999998e-32  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.566245  n/a   
 
 
-
 
NC_007509  Bcep18194_C7650  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  39.24 
 
 
247 aa  140  3e-32  Burkholderia sp. 383  Bacteria  normal  0.621765  normal 
 
 
-
 
NC_009012  Cthe_2116  binding-protein-dependent transport systems inner membrane component  30.38 
 
 
253 aa  139  4.999999999999999e-32  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_2064  binding-protein-dependent transport systems inner membrane component  31.14 
 
 
254 aa  138  1e-31  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.00112586  n/a   
 
 
-
 
NC_010681  Bphyt_1488  binding-protein-dependent transport systems inner membrane component  38.03 
 
 
247 aa  138  1e-31  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3131  binding-protein-dependent transport systems inner membrane component  35.9 
 
 
281 aa  138  1e-31  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3810  binding-protein-dependent transport systems inner membrane component  31.37 
 
 
258 aa  137  2e-31  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.42897 
 
 
-
 
NC_009486  Tpet_0435  binding-protein-dependent transport systems inner membrane component  33.76 
 
 
250 aa  134  1.9999999999999998e-30  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4547  putative ABC transporter, permease protein  34.57 
 
 
251 aa  134  1.9999999999999998e-30  Bacillus cereus G9842  Bacteria  normal  0.113137  normal  0.441246 
 
 
-
 
NC_011658  BCAH187_A0881  putative ABC transporter, permease protein  33.98 
 
 
251 aa  134  1.9999999999999998e-30  Bacillus cereus AH187  Bacteria  hitchhiker  0.00328051  n/a   
 
 
-
 
NC_003909  BCE_0797  ABC transporter, permease protein, putative  33.98 
 
 
250 aa  132  3.9999999999999996e-30  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_3036  binding-protein-dependent transport systems inner membrane component  33.89 
 
 
266 aa  133  3.9999999999999996e-30  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3645  binding-protein-dependent transport systems inner membrane component  36.47 
 
 
268 aa  133  3.9999999999999996e-30  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_3506  binding-protein-dependent transport systems inner membrane component  34.53 
 
 
282 aa  132  3.9999999999999996e-30  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0528385  normal  0.0939424 
 
 
-
 
NC_012850  Rleg_3934  binding-protein-dependent transport systems inner membrane component  34.51 
 
 
278 aa  132  6e-30  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.421742  normal 
 
 
-
 
NC_010184  BcerKBAB4_0643  binding-protein-dependent transport systems inner membrane component  34.29 
 
 
251 aa  132  6.999999999999999e-30  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0614  binding-protein-dependent transport systems inner membrane component  36 
 
 
250 aa  131  7.999999999999999e-30  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1643  binding-protein-dependent transport systems inner membrane component  40.08 
 
 
259 aa  132  7.999999999999999e-30  Conexibacter woesei DSM 14684  Bacteria  normal  0.805205  normal  0.60128 
 
 
-
 
NC_006274  BCZK0637  ABC transporter, permease  34.06 
 
 
250 aa  131  9e-30  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0693  ABC transporter permease  34.06 
 
 
250 aa  131  1.0000000000000001e-29  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0637  ABC transporter, permease  34.06 
 
 
250 aa  131  1.0000000000000001e-29  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00537874  n/a   
 
 
-
 
NC_007530  GBAA_0727  ABC transporter permease  34.06 
 
 
250 aa  131  1.0000000000000001e-29  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0363276  n/a   
 
 
-
 
NC_011773  BCAH820_0804  putative ABC transporter, permease protein  34.06 
 
 
250 aa  131  1.0000000000000001e-29  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.22036e-46 
 
 
-
 
NC_013235  Namu_1668  binding-protein-dependent transport systems inner membrane component  34.78 
 
 
288 aa  131  1.0000000000000001e-29  Nakamurella multipartita DSM 44233  Bacteria  normal  0.173855  normal  0.365472 
 
 
-
 
NC_011725  BCB4264_A0784  putative ABC transporter, permease protein  33.62 
 
 
250 aa  130  3e-29  Bacillus cereus B4264  Bacteria  normal  0.605831  n/a   
 
 
-
 
NC_013743  Htur_0667  binding-protein-dependent transport systems inner membrane component  39.44 
 
 
299 aa  129  5.0000000000000004e-29  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_010483  TRQ2_0450  binding-protein-dependent transport systems inner membrane component  34.8 
 
 
222 aa  129  6e-29  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_7629  putative ABC transporter permease protein  34.63 
 
 
282 aa  128  1.0000000000000001e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.262472  normal  0.441686 
 
 
-
 
NC_013739  Cwoe_2762  binding-protein-dependent transport systems inner membrane component  35.41 
 
 
250 aa  127  1.0000000000000001e-28  Conexibacter woesei DSM 14684  Bacteria  normal  0.0247808  normal  0.0244453 
 
 
-
 
NC_009953  Sare_4268  binding-protein-dependent transport systems inner membrane component  34.65 
 
 
282 aa  127  1.0000000000000001e-28  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0113678 
 
 
-
 
NC_007948  Bpro_2274  binding-protein-dependent transport systems inner membrane component  34.96 
 
 
279 aa  127  2.0000000000000002e-28  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_3877  binding-protein-dependent transport systems inner membrane component  35.43 
 
 
282 aa  126  3e-28  Salinispora tropica CNB-440  Bacteria  normal  0.901388  normal 
 
 
-
 
NC_009669  Oant_4580  binding-protein-dependent transport systems inner membrane component  34.63 
 
 
257 aa  125  5e-28  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0403  binding-protein-dependent transport systems inner membrane component  36.02 
 
 
271 aa  125  6e-28  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009952  Dshi_2545  binding-protein-dependent transport system protein  31.73 
 
 
287 aa  125  8.000000000000001e-28  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.240068  normal  0.521676 
 
 
-
 
NC_007802  Jann_3753  binding-protein-dependent transport systems inner membrane component  33.2 
 
 
268 aa  125  8.000000000000001e-28  Jannaschia sp. CCS1  Bacteria  normal  0.333865  normal 
 
 
-
 
NC_007778  RPB_3093  binding-protein dependent transport system inner membrane protein  34.14 
 
 
259 aa  124  1e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.942666 
 
 
-
 
NC_009767  Rcas_0666  binding-protein-dependent transport systems inner membrane component  38.14 
 
 
272 aa  124  1e-27  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  34.67 
 
 
273 aa  124  2e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_2336  binding-protein-dependent transport systems inner membrane component  36.11 
 
 
277 aa  124  2e-27  Variovorax paradoxus S110  Bacteria  normal  0.544063  n/a   
 
 
-
 
NC_003295  RSc1200  transmembrane permease ABC transporter protein  34.85 
 
 
263 aa  123  3e-27  Ralstonia solanacearum GMI1000  Bacteria  normal  0.441856  normal  0.826922 
 
 
-
 
NC_009485  BBta_1263  ABC transporter permease  36.07 
 
 
262 aa  122  6e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.165267 
 
 
-
 
NC_008148  Rxyl_3035  binding-protein-dependent transport systems inner membrane component  38.32 
 
 
256 aa  122  6e-27  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_3181  binding-protein-dependent transport systems inner membrane component  32.95 
 
 
277 aa  122  7e-27  Burkholderia phymatum STM815  Bacteria  normal  0.0283642  normal 
 
 
-
 
NC_011988  Avi_5406  ABC transporter membrane spanning protein  34.17 
 
 
251 aa  122  7e-27  Agrobacterium vitis S4  Bacteria  normal  0.408693  n/a   
 
 
-
 
NC_014151  Cfla_3017  binding-protein-dependent transport systems inner membrane component  37.93 
 
 
253 aa  121  9.999999999999999e-27  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.946292  normal 
 
 
-
 
NC_013946  Mrub_1076  ABC transporter-like protein  37.44 
 
 
488 aa  120  1.9999999999999998e-26  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.276573 
 
 
-
 
NC_007347  Reut_A2103  binding-protein dependent transport system inner membrane protein  35.06 
 
 
263 aa  120  3e-26  Ralstonia eutropha JMP134  Bacteria  normal  0.153016  n/a   
 
 
-
 
NC_010511  M446_0770  binding-protein-dependent transport systems inner membrane component  35.32 
 
 
273 aa  119  3.9999999999999996e-26  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_3116  binding-protein-dependent transport systems inner membrane component  37.78 
 
 
272 aa  119  6e-26  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.025765  normal 
 
 
-
 
NC_007973  Rmet_2120  binding-protein-dependent transport systems inner membrane component  35.47 
 
 
263 aa  119  6e-26  Cupriavidus metallidurans CH34  Bacteria  normal  0.0243564  normal  0.0474626 
 
 
-
 
NC_009485  BBta_1169  putative ABC transporter permease protein  32.95 
 
 
279 aa  119  6e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4889  binding-protein-dependent transport systems inner membrane component  35.68 
 
 
258 aa  119  6e-26  Actinosynnema mirum DSM 43827  Bacteria  normal  0.90454  n/a   
 
 
-
 
NC_008254  Meso_0814  binding-protein-dependent transport systems inner membrane component  30.38 
 
 
270 aa  118  7e-26  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
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