More than 300 homologs were found in PanDaTox collection
for query gene Rxyl_3036 on replicon NC_008148
Organism: Rubrobacter xylanophilus DSM 9941



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008148  Rxyl_3036  binding-protein-dependent transport systems inner membrane component  100 
 
 
266 aa  521  1e-147  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_2762  binding-protein-dependent transport systems inner membrane component  53.21 
 
 
250 aa  215  7e-55  Conexibacter woesei DSM 14684  Bacteria  normal  0.0247808  normal  0.0244453 
 
 
-
 
NC_013739  Cwoe_3810  binding-protein-dependent transport systems inner membrane component  37.02 
 
 
258 aa  172  5.999999999999999e-42  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.42897 
 
 
-
 
NC_007802  Jann_3753  binding-protein-dependent transport systems inner membrane component  38.77 
 
 
268 aa  170  2e-41  Jannaschia sp. CCS1  Bacteria  normal  0.333865  normal 
 
 
-
 
NC_008786  Veis_3506  binding-protein-dependent transport systems inner membrane component  39.83 
 
 
282 aa  169  3e-41  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0528385  normal  0.0939424 
 
 
-
 
NC_013223  Dret_2296  binding-protein-dependent transport systems inner membrane component  38.71 
 
 
250 aa  153  2.9999999999999998e-36  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_06840  ABC-type nitrate/sulfonate/bicarbonate transport system permease component  36.4 
 
 
266 aa  149  4e-35  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_000865  hydroxymethylpyrimidine ABC transporter transmembrane component  36.4 
 
 
266 aa  147  2.0000000000000003e-34  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_012852  Rleg_6281  binding-protein-dependent transport systems inner membrane component  36.32 
 
 
256 aa  145  9e-34  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.783663  normal 
 
 
-
 
NC_008709  Ping_2376  ABC transporter substrate binding inner membrane protein  32.53 
 
 
265 aa  145  9e-34  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_013203  Apar_0391  binding-protein-dependent transport systems inner membrane component  31.36 
 
 
257 aa  142  5e-33  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_1862  binding-protein-dependent transport systems inner membrane component  34.07 
 
 
257 aa  136  3.0000000000000003e-31  Variovorax paradoxus S110  Bacteria  normal  0.116723  n/a   
 
 
-
 
NC_009921  Franean1_5688  binding-protein-dependent transport systems inner membrane component  34.02 
 
 
284 aa  136  4e-31  Frankia sp. EAN1pec  Bacteria  normal  0.748678  normal 
 
 
-
 
NC_008148  Rxyl_3035  binding-protein-dependent transport systems inner membrane component  33.47 
 
 
256 aa  135  7.000000000000001e-31  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0620  binding-protein-dependent transport systems inner membrane component  35 
 
 
254 aa  134  1.9999999999999998e-30  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.63161  normal 
 
 
-
 
NC_011313  VSAL_II0488  putative binding protein-dependent transport system, membrane component  35.2 
 
 
272 aa  133  3e-30  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.970837  n/a   
 
 
-
 
NC_013165  Shel_13670  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  31.9 
 
 
249 aa  129  3e-29  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_6052  binding-protein-dependent transport systems inner membrane component  32.58 
 
 
274 aa  130  3e-29  Variovorax paradoxus S110  Bacteria  normal  0.0454164  n/a   
 
 
-
 
NC_013515  Smon_0476  binding-protein-dependent transport systems inner membrane component  30.97 
 
 
249 aa  129  4.0000000000000003e-29  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_014151  Cfla_2798  binding-protein-dependent transport systems inner membrane component  32.57 
 
 
288 aa  128  9.000000000000001e-29  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.706762  hitchhiker  0.0028911 
 
 
-
 
NC_012850  Rleg_3934  binding-protein-dependent transport systems inner membrane component  32.81 
 
 
278 aa  127  2.0000000000000002e-28  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.421742  normal 
 
 
-
 
NC_011365  Gdia_3269  binding-protein-dependent transport systems inner membrane component  35.55 
 
 
253 aa  127  2.0000000000000002e-28  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.283078  normal 
 
 
-
 
NC_007963  Csal_1933  binding-protein-dependent transport systems inner membrane component  34.62 
 
 
255 aa  125  6e-28  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.323499  n/a   
 
 
-
 
NC_013525  Tter_0403  binding-protein-dependent transport systems inner membrane component  31.78 
 
 
271 aa  125  6e-28  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009921  Franean1_3131  binding-protein-dependent transport systems inner membrane component  28.63 
 
 
281 aa  125  7e-28  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_3645  binding-protein-dependent transport systems inner membrane component  33.2 
 
 
268 aa  125  1e-27  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4268  binding-protein-dependent transport systems inner membrane component  32.22 
 
 
282 aa  122  4e-27  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0113678 
 
 
-
 
NC_013235  Namu_1668  binding-protein-dependent transport systems inner membrane component  32.61 
 
 
288 aa  121  9.999999999999999e-27  Nakamurella multipartita DSM 44233  Bacteria  normal  0.173855  normal  0.365472 
 
 
-
 
NC_009486  Tpet_0435  binding-protein-dependent transport systems inner membrane component  28.17 
 
 
250 aa  121  1.9999999999999998e-26  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0877  binding-protein-dependent transport systems inner membrane component  30.4 
 
 
260 aa  119  3e-26  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.00000000112184  n/a   
 
 
-
 
NC_013525  Tter_1221  binding-protein-dependent transport systems inner membrane component  34.74 
 
 
246 aa  120  3e-26  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013739  Cwoe_4254  binding-protein-dependent transport systems inner membrane component  32.6 
 
 
283 aa  119  6e-26  Conexibacter woesei DSM 14684  Bacteria  normal  0.0441349  normal  0.902161 
 
 
-
 
NC_009832  Spro_3124  binding-protein-dependent transport systems inner membrane component  33.16 
 
 
255 aa  118  9.999999999999999e-26  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_2064  binding-protein-dependent transport systems inner membrane component  28.83 
 
 
254 aa  118  9.999999999999999e-26  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.00112586  n/a   
 
 
-
 
NC_013946  Mrub_1883  binding-protein-dependent transport systems inner membrane component  33.04 
 
 
322 aa  117  1.9999999999999998e-25  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.167871 
 
 
-
 
NC_014212  Mesil_2099  binding-protein-dependent transport systems inner membrane component  34.38 
 
 
306 aa  117  1.9999999999999998e-25  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_1151  binding-protein-dependent transport systems inner membrane component  28 
 
 
254 aa  116  3e-25  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_3205  binding-protein-dependent transport systems inner membrane component  28.06 
 
 
265 aa  116  3e-25  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.000457845  n/a   
 
 
-
 
NC_010483  TRQ2_0450  binding-protein-dependent transport systems inner membrane component  30.14 
 
 
222 aa  115  5e-25  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_4887  binding-protein-dependent transport systems inner membrane component  29.73 
 
 
267 aa  115  5e-25  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2116  binding-protein-dependent transport systems inner membrane component  31.3 
 
 
253 aa  115  5e-25  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_0667  binding-protein-dependent transport systems inner membrane component  32.4 
 
 
299 aa  115  6e-25  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_002947  PP_3210  ABC transporter, permease protein  34.53 
 
 
267 aa  115  6.9999999999999995e-25  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1643  binding-protein dependent transport system inner membrane protein  33.89 
 
 
261 aa  114  1.0000000000000001e-24  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0353041  n/a   
 
 
-
 
NC_010501  PputW619_2588  binding-protein-dependent transport systems inner membrane component  34.53 
 
 
267 aa  114  1.0000000000000001e-24  Pseudomonas putida W619  Bacteria  normal  normal  0.417353 
 
 
-
 
NC_009380  Strop_3877  binding-protein-dependent transport systems inner membrane component  29.8 
 
 
282 aa  115  1.0000000000000001e-24  Salinispora tropica CNB-440  Bacteria  normal  0.901388  normal 
 
 
-
 
NC_004310  BR0211  ABC transporter, permease protein  29.39 
 
 
258 aa  114  2.0000000000000002e-24  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_0202  ABC transporter, permease protein  29.39 
 
 
258 aa  114  2.0000000000000002e-24  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_008043  TM1040_3658  binding-protein-dependent transport systems inner membrane component  35.29 
 
 
245 aa  114  2.0000000000000002e-24  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0926  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
249 aa  114  2.0000000000000002e-24  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.04587  n/a   
 
 
-
 
NC_009523  RoseRS_2763  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
275 aa  113  3e-24  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_2867  binding-protein-dependent transport systems inner membrane component  29.46 
 
 
277 aa  112  4.0000000000000004e-24  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0278  binding-protein-dependent transport systems inner membrane component  29.57 
 
 
258 aa  112  4.0000000000000004e-24  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2084  binding-protein-dependent transport systems inner membrane component  33.48 
 
 
260 aa  113  4.0000000000000004e-24  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.566245  n/a   
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  31.14 
 
 
273 aa  113  4.0000000000000004e-24  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0770  binding-protein-dependent transport systems inner membrane component  33.04 
 
 
273 aa  112  6e-24  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_1488  binding-protein-dependent transport systems inner membrane component  33.65 
 
 
247 aa  112  6e-24  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009524  PsycPRwf_1445  binding-protein-dependent transport systems inner membrane component  27.43 
 
 
259 aa  112  6e-24  Psychrobacter sp. PRwf-1  Bacteria  normal  normal  0.318112 
 
 
-
 
NC_013946  Mrub_1884  binding-protein-dependent transport systems inner membrane component  35.05 
 
 
307 aa  111  1.0000000000000001e-23  Meiothermus ruber DSM 1279  Bacteria  normal  0.665089  normal  0.160596 
 
 
-
 
NC_007509  Bcep18194_C7650  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  33.03 
 
 
247 aa  111  1.0000000000000001e-23  Burkholderia sp. 383  Bacteria  normal  0.621765  normal 
 
 
-
 
NC_008312  Tery_1625  binding-protein-dependent transport systems inner membrane component  29.01 
 
 
285 aa  111  1.0000000000000001e-23  Trichodesmium erythraeum IMS101  Bacteria  normal  0.0792607  normal  0.95709 
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  29.57 
 
 
261 aa  111  2.0000000000000002e-23  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_007802  Jann_1473  binding-protein-dependent transport systems inner membrane component  28 
 
 
283 aa  110  3e-23  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_2761  binding-protein-dependent transport systems inner membrane component  35.84 
 
 
258 aa  110  3e-23  Conexibacter woesei DSM 14684  Bacteria  normal  0.165765  normal  0.0247635 
 
 
-
 
NC_008541  Arth_0030  binding-protein-dependent transport systems inner membrane component  29.55 
 
 
273 aa  110  3e-23  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_0033  binding-protein-dependent transport systems inner membrane component  34.45 
 
 
243 aa  110  3e-23  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3118  binding-protein dependent transport system inner membrane protein  27.73 
 
 
284 aa  109  4.0000000000000004e-23  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4760  binding-protein-dependent transport systems inner membrane component  30.08 
 
 
267 aa  109  4.0000000000000004e-23  Variovorax paradoxus S110  Bacteria  normal  0.318809  n/a   
 
 
-
 
NC_010623  Bphy_3181  binding-protein-dependent transport systems inner membrane component  28.46 
 
 
277 aa  108  7.000000000000001e-23  Burkholderia phymatum STM815  Bacteria  normal  0.0283642  normal 
 
 
-
 
NC_003909  BCE_0797  ABC transporter, permease protein, putative  30.49 
 
 
250 aa  107  1e-22  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0643  binding-protein-dependent transport systems inner membrane component  29.67 
 
 
251 aa  107  1e-22  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_5406  ABC transporter membrane spanning protein  29.84 
 
 
251 aa  108  1e-22  Agrobacterium vitis S4  Bacteria  normal  0.408693  n/a   
 
 
-
 
NC_011725  BCB4264_A0446  putative ABC transporter, permease protein  27.84 
 
 
257 aa  107  2e-22  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1308  binding-protein-dependent transport systems inner membrane component  36.72 
 
 
254 aa  107  2e-22  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.0000169849 
 
 
-
 
NC_014212  Mesil_2100  binding-protein-dependent transport systems inner membrane component  34.54 
 
 
275 aa  107  2e-22  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK0637  ABC transporter, permease  29.67 
 
 
250 aa  106  3e-22  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1305  binding-protein-dependent transport systems inner membrane component  33.97 
 
 
286 aa  106  3e-22  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.527409  normal  0.263376 
 
 
-
 
NC_011899  Hore_11490  binding-protein-dependent transport systems inner membrane component  27.49 
 
 
278 aa  107  3e-22  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000000965537  n/a   
 
 
-
 
NC_005945  BAS0693  ABC transporter permease  29.67 
 
 
250 aa  106  4e-22  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0727  ABC transporter permease  29.67 
 
 
250 aa  106  4e-22  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0363276  n/a   
 
 
-
 
NC_011773  BCAH820_0804  putative ABC transporter, permease protein  29.67 
 
 
250 aa  105  5e-22  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.22036e-46 
 
 
-
 
NC_011773  BCAH820_0424  putative ABC transporter, permease protein  27.45 
 
 
257 aa  105  7e-22  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_009674  Bcer98_0370  binding-protein-dependent transport systems inner membrane component  27.91 
 
 
256 aa  105  7e-22  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4878  putative ABC transporter, permease protein  27.45 
 
 
255 aa  105  7e-22  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_0381  ABC transporter permease  27.45 
 
 
257 aa  105  7e-22  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0491  ABC transporter, permease protein, putative  27.45 
 
 
257 aa  105  8e-22  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4504  binding-protein-dependent transport systems inner membrane component  30.4 
 
 
281 aa  105  8e-22  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_0362  binding-protein-dependent transport systems inner membrane component  28.24 
 
 
255 aa  105  8e-22  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0367  ABC transporter permease  27.45 
 
 
265 aa  105  1e-21  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0357  ABC transporter, permease  27.45 
 
 
265 aa  105  1e-21  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0637  ABC transporter, permease  29.27 
 
 
250 aa  104  1e-21  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00537874  n/a   
 
 
-
 
NC_011725  BCB4264_A0784  putative ABC transporter, permease protein  28.99 
 
 
250 aa  105  1e-21  Bacillus cereus B4264  Bacteria  normal  0.605831  n/a   
 
 
-
 
NC_012793  GWCH70_2621  binding-protein-dependent transport systems inner membrane component  25.94 
 
 
281 aa  104  1e-21  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00000218671  n/a   
 
 
-
 
NC_007778  RPB_3093  binding-protein dependent transport system inner membrane protein  32.56 
 
 
259 aa  104  1e-21  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.942666 
 
 
-
 
NC_012791  Vapar_0620  binding-protein-dependent transport systems inner membrane component  31.73 
 
 
258 aa  104  1e-21  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0666  binding-protein-dependent transport systems inner membrane component  31.06 
 
 
272 aa  104  2e-21  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_3758  binding-protein-dependent transport systems inner membrane component  28.7 
 
 
256 aa  103  2e-21  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_3606  binding-protein-dependent transport systems inner membrane component  27.9 
 
 
257 aa  103  2e-21  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.071611 
 
 
-
 
NC_009428  Rsph17025_0588  binding-protein-dependent transport systems inner membrane component  33.04 
 
 
238 aa  103  2e-21  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.98825  normal 
 
 
-
 
NC_011658  BCAH187_A0493  putative ABC transporter, permease protein  27.06 
 
 
257 aa  103  2e-21  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
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