Gene Shel_13670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_13670 
Symbol 
ID8395258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1566277 
End bp1567026 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content58% 
IMG OID644986122 
ProductABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
Protein accessionYP_003143739 
Protein GI257064067 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGAA TTGCCGTTCC ATTGGCTACG CTTGCGCTCA TCCTGTTGGT GTGGCAAGGG 
TCTGTGGATT TCGGGTTCAT CCCGAATTTC CTTCTGCCTA CGCCTACGCA GGTTGTGGCG
TCCCTCGCAA ACGACTGGCA ACTGCTGGCG CACCATGCGG CGACCACGCT GTTGGAGGCC
GCTGTGGGCT TGGCTCTCGG CGTGCTTCTG GGATTCATCG TTGCCGTGGC CATGGACCGT
TTCGAAACGC TGTACCTGGC GCTTGAGCCC GTCGTAACCA TCTCCCAAAC GGTGCCGACC
ATCGCGATCG CACCTCTGCT GGTTTTGTGG CTCGGCTACG GTTTGCTTCC GAAGATCGTG
CTCATCATCG TGACCACTTT CTTCCCGATC ACCGTTTCGC TGGTGTCGGG ATTCAAATCG
GTGGATCCCG ACGTGGTGGA CCTGATGCGC ACGATGAACG CTTCGCGCTG GCAGATCTTC
CTGTATGCGA AGATCCCAGC TGCCAGCGAC CAGTTCTTCG CGGGCCTGAA AATCAGCGCC
ACCTATGCCA TCGTCGGCGC AGTCATCGCC GAATGGCTCG GCGGAAACGC GGGCTTGGGC
GTCTATATGA CGCGCGTCCG CAAATCGTTC TCCTATGACC GCATGTTCGC GGTCATCATC
GTGATCAGCG CGCTGTCGCT GGTTCTTATG AAGCTCATCG ACCTGCTTCA AAAGGTTTGC
ATGCCTTGGA AGCCTCAGGA AAGGAAATAA
 
Protein sequence
MKRIAVPLAT LALILLVWQG SVDFGFIPNF LLPTPTQVVA SLANDWQLLA HHAATTLLEA 
AVGLALGVLL GFIVAVAMDR FETLYLALEP VVTISQTVPT IAIAPLLVLW LGYGLLPKIV
LIIVTTFFPI TVSLVSGFKS VDPDVVDLMR TMNASRWQIF LYAKIPAASD QFFAGLKISA
TYAIVGAVIA EWLGGNAGLG VYMTRVRKSF SYDRMFAVII VISALSLVLM KLIDLLQKVC
MPWKPQERK