More than 300 homologs were found in PanDaTox collection
for query gene Strop_3877 on replicon NC_009380
Organism: Salinispora tropica CNB-440



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009380  Strop_3877  binding-protein-dependent transport systems inner membrane component  100 
 
 
282 aa  545  1e-154  Salinispora tropica CNB-440  Bacteria  normal  0.901388  normal 
 
 
-
 
NC_009953  Sare_4268  binding-protein-dependent transport systems inner membrane component  84.4 
 
 
282 aa  445  1.0000000000000001e-124  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0113678 
 
 
-
 
NC_009669  Oant_4580  binding-protein-dependent transport systems inner membrane component  40.09 
 
 
257 aa  159  4e-38  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_012792  Vapar_6052  binding-protein-dependent transport systems inner membrane component  44.17 
 
 
274 aa  157  2e-37  Variovorax paradoxus S110  Bacteria  normal  0.0454164  n/a   
 
 
-
 
NC_012791  Vapar_0620  binding-protein-dependent transport systems inner membrane component  42.52 
 
 
258 aa  152  7e-36  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1862  binding-protein-dependent transport systems inner membrane component  40.57 
 
 
257 aa  150  3e-35  Variovorax paradoxus S110  Bacteria  normal  0.116723  n/a   
 
 
-
 
NC_008786  Veis_0620  binding-protein-dependent transport systems inner membrane component  41.04 
 
 
254 aa  148  9e-35  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.63161  normal 
 
 
-
 
NC_007778  RPB_3093  binding-protein dependent transport system inner membrane protein  37.61 
 
 
259 aa  142  7e-33  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.942666 
 
 
-
 
NC_007778  RPB_3118  binding-protein dependent transport system inner membrane protein  34.2 
 
 
284 aa  137  2e-31  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4254  binding-protein-dependent transport systems inner membrane component  35.54 
 
 
283 aa  136  4e-31  Conexibacter woesei DSM 14684  Bacteria  normal  0.0441349  normal  0.902161 
 
 
-
 
NC_009921  Franean1_3131  binding-protein-dependent transport systems inner membrane component  32.06 
 
 
281 aa  135  7.000000000000001e-31  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1393  binding-protein-dependent transport systems inner membrane component  36.6 
 
 
254 aa  134  9.999999999999999e-31  Meiothermus ruber DSM 1279  Bacteria  normal  0.302994  normal  0.157809 
 
 
-
 
NC_011988  Avi_5406  ABC transporter membrane spanning protein  35.1 
 
 
251 aa  134  1.9999999999999998e-30  Agrobacterium vitis S4  Bacteria  normal  0.408693  n/a   
 
 
-
 
NC_010623  Bphy_3181  binding-protein-dependent transport systems inner membrane component  35.63 
 
 
277 aa  134  1.9999999999999998e-30  Burkholderia phymatum STM815  Bacteria  normal  0.0283642  normal 
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  32.27 
 
 
261 aa  133  3.9999999999999996e-30  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_008254  Meso_0814  binding-protein-dependent transport systems inner membrane component  35.35 
 
 
270 aa  132  7.999999999999999e-30  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_2296  binding-protein-dependent transport systems inner membrane component  41.59 
 
 
250 aa  131  1.0000000000000001e-29  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_1488  binding-protein-dependent transport systems inner membrane component  43.75 
 
 
247 aa  130  4.0000000000000003e-29  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1095  binding-protein-dependent transport systems inner membrane component  35 
 
 
255 aa  129  4.0000000000000003e-29  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010184  BcerKBAB4_0362  binding-protein-dependent transport systems inner membrane component  31.65 
 
 
255 aa  129  7.000000000000001e-29  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4878  putative ABC transporter, permease protein  31.65 
 
 
255 aa  129  7.000000000000001e-29  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_3419  binding-protein-dependent transport systems inner membrane component  35.81 
 
 
258 aa  129  7.000000000000001e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.121812  n/a   
 
 
-
 
NC_003909  BCE_0491  ABC transporter, permease protein, putative  31.65 
 
 
257 aa  129  8.000000000000001e-29  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0424  putative ABC transporter, permease protein  31.65 
 
 
257 aa  129  8.000000000000001e-29  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS0367  ABC transporter permease  31.65 
 
 
265 aa  128  8.000000000000001e-29  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0357  ABC transporter, permease  31.65 
 
 
265 aa  128  8.000000000000001e-29  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0493  putative ABC transporter, permease protein  31.65 
 
 
257 aa  129  8.000000000000001e-29  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7650  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  41.71 
 
 
247 aa  129  8.000000000000001e-29  Burkholderia sp. 383  Bacteria  normal  0.621765  normal 
 
 
-
 
NC_007530  GBAA_0381  ABC transporter permease  31.65 
 
 
257 aa  129  8.000000000000001e-29  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1091  binding-protein-dependent transport systems inner membrane component  34.48 
 
 
258 aa  127  2.0000000000000002e-28  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0347556  normal 
 
 
-
 
NC_010002  Daci_1140  binding-protein-dependent transport systems inner membrane component  33.62 
 
 
255 aa  126  3e-28  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK0354  ABC transporter, permease  31.65 
 
 
265 aa  127  3e-28  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1221  binding-protein-dependent transport systems inner membrane component  34.69 
 
 
246 aa  127  3e-28  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007973  Rmet_0394  binding-protein-dependent transport systems inner membrane component  36.32 
 
 
259 aa  125  6e-28  Cupriavidus metallidurans CH34  Bacteria  normal  hitchhiker  0.00657833 
 
 
-
 
NC_011725  BCB4264_A0446  putative ABC transporter, permease protein  31.92 
 
 
257 aa  125  6e-28  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_3961  binding-protein-dependent transport systems inner membrane component  32.5 
 
 
256 aa  125  8.000000000000001e-28  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000865  hydroxymethylpyrimidine ABC transporter transmembrane component  34.03 
 
 
266 aa  125  8.000000000000001e-28  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0370  binding-protein-dependent transport systems inner membrane component  30.22 
 
 
256 aa  125  1e-27  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2127  binding-protein-dependent transport systems inner membrane component  33.06 
 
 
255 aa  125  1e-27  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.427162 
 
 
-
 
NC_008786  Veis_3506  binding-protein-dependent transport systems inner membrane component  33.47 
 
 
282 aa  123  4e-27  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0528385  normal  0.0939424 
 
 
-
 
NC_009784  VIBHAR_06840  ABC-type nitrate/sulfonate/bicarbonate transport system permease component  34.19 
 
 
266 aa  122  6e-27  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013093  Amir_4887  binding-protein-dependent transport systems inner membrane component  35.52 
 
 
267 aa  122  9e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2703  binding-protein-dependent transport systems inner membrane component  30.9 
 
 
263 aa  120  1.9999999999999998e-26  Marinomonas sp. MWYL1  Bacteria  normal  0.88688  normal 
 
 
-
 
NC_011831  Cagg_3116  binding-protein-dependent transport systems inner membrane component  39.15 
 
 
272 aa  120  1.9999999999999998e-26  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.025765  normal 
 
 
-
 
NC_011365  Gdia_3269  binding-protein-dependent transport systems inner membrane component  38.1 
 
 
253 aa  120  1.9999999999999998e-26  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.283078  normal 
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  33.64 
 
 
273 aa  119  4.9999999999999996e-26  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_13670  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  31.25 
 
 
249 aa  119  7e-26  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3753  binding-protein-dependent transport systems inner membrane component  31.37 
 
 
268 aa  118  9e-26  Jannaschia sp. CCS1  Bacteria  normal  0.333865  normal 
 
 
-
 
NC_011830  Dhaf_0877  binding-protein-dependent transport systems inner membrane component  30.68 
 
 
260 aa  118  9.999999999999999e-26  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.00000000112184  n/a   
 
 
-
 
NC_008025  Dgeo_0111  ABC transporter related  37.96 
 
 
493 aa  117  1.9999999999999998e-25  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_2116  binding-protein-dependent transport systems inner membrane component  31.42 
 
 
253 aa  117  1.9999999999999998e-25  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_0667  binding-protein-dependent transport systems inner membrane component  36.72 
 
 
299 aa  116  3.9999999999999997e-25  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_008148  Rxyl_2084  binding-protein-dependent transport systems inner membrane component  40.12 
 
 
260 aa  116  3.9999999999999997e-25  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.566245  n/a   
 
 
-
 
NC_010511  M446_3606  binding-protein-dependent transport systems inner membrane component  32.28 
 
 
257 aa  116  5e-25  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.071611 
 
 
-
 
NC_009719  Plav_0891  binding-protein-dependent transport systems inner membrane component  30.6 
 
 
268 aa  116  5e-25  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.223421 
 
 
-
 
NC_007963  Csal_1933  binding-protein-dependent transport systems inner membrane component  33.18 
 
 
255 aa  115  6.9999999999999995e-25  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.323499  n/a   
 
 
-
 
NC_008148  Rxyl_3036  binding-protein-dependent transport systems inner membrane component  29.8 
 
 
266 aa  115  1.0000000000000001e-24  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2376  ABC transporter substrate binding inner membrane protein  29.41 
 
 
265 aa  114  1.0000000000000001e-24  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_011313  VSAL_II0488  putative binding protein-dependent transport system, membrane component  35.15 
 
 
272 aa  115  1.0000000000000001e-24  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.970837  n/a   
 
 
-
 
NC_009485  BBta_7629  putative ABC transporter permease protein  32.62 
 
 
282 aa  114  2.0000000000000002e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.262472  normal  0.441686 
 
 
-
 
NC_010511  M446_0770  binding-protein-dependent transport systems inner membrane component  33.64 
 
 
273 aa  114  2.0000000000000002e-24  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_0797  ABC transporter, permease protein, putative  35.29 
 
 
250 aa  113  3e-24  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0637  ABC transporter, permease  34.39 
 
 
250 aa  113  3e-24  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4074  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
281 aa  114  3e-24  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.265456 
 
 
-
 
NC_005945  BAS0693  ABC transporter permease  34.39 
 
 
250 aa  113  4.0000000000000004e-24  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0637  ABC transporter, permease  34.39 
 
 
250 aa  113  4.0000000000000004e-24  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00537874  n/a   
 
 
-
 
NC_009674  Bcer98_0614  binding-protein-dependent transport systems inner membrane component  34.84 
 
 
250 aa  113  4.0000000000000004e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0804  putative ABC transporter, permease protein  34.39 
 
 
250 aa  113  4.0000000000000004e-24  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.22036e-46 
 
 
-
 
NC_007530  GBAA_0727  ABC transporter permease  34.39 
 
 
250 aa  113  4.0000000000000004e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0363276  n/a   
 
 
-
 
NC_013203  Apar_0391  binding-protein-dependent transport systems inner membrane component  30.42 
 
 
257 aa  112  6e-24  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A0784  putative ABC transporter, permease protein  34.39 
 
 
250 aa  112  6e-24  Bacillus cereus B4264  Bacteria  normal  0.605831  n/a   
 
 
-
 
NC_011772  BCG9842_B4547  putative ABC transporter, permease protein  34.14 
 
 
251 aa  112  6e-24  Bacillus cereus G9842  Bacteria  normal  0.113137  normal  0.441246 
 
 
-
 
NC_013525  Tter_0403  binding-protein-dependent transport systems inner membrane component  33.86 
 
 
271 aa  112  8.000000000000001e-24  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007802  Jann_1473  binding-protein-dependent transport systems inner membrane component  31.7 
 
 
283 aa  112  9e-24  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A0881  putative ABC transporter, permease protein  34.39 
 
 
251 aa  112  9e-24  Bacillus cereus AH187  Bacteria  hitchhiker  0.00328051  n/a   
 
 
-
 
NC_013946  Mrub_1884  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
307 aa  111  1.0000000000000001e-23  Meiothermus ruber DSM 1279  Bacteria  normal  0.665089  normal  0.160596 
 
 
-
 
NC_010184  BcerKBAB4_0643  binding-protein-dependent transport systems inner membrane component  34.39 
 
 
251 aa  111  1.0000000000000001e-23  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_11490  binding-protein-dependent transport systems inner membrane component  28.17 
 
 
278 aa  111  1.0000000000000001e-23  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000000965537  n/a   
 
 
-
 
NC_009523  RoseRS_0669  binding-protein-dependent transport systems inner membrane component  37.74 
 
 
272 aa  111  1.0000000000000001e-23  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0848141 
 
 
-
 
NC_010002  Daci_4527  binding-protein-dependent transport systems inner membrane component  42.26 
 
 
253 aa  111  1.0000000000000001e-23  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_1834  binding-protein-dependent transport systems inner membrane component  30.56 
 
 
268 aa  111  1.0000000000000001e-23  Desulfotomaculum reducens MI-1  Bacteria  normal  0.101401  n/a   
 
 
-
 
NC_013441  Gbro_0259  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
453 aa  110  2.0000000000000002e-23  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3124  binding-protein-dependent transport systems inner membrane component  37.44 
 
 
255 aa  111  2.0000000000000002e-23  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_3758  binding-protein-dependent transport systems inner membrane component  34.52 
 
 
256 aa  111  2.0000000000000002e-23  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2100  binding-protein-dependent transport systems inner membrane component  35.86 
 
 
275 aa  110  3e-23  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_3205  binding-protein-dependent transport systems inner membrane component  30.98 
 
 
265 aa  110  3e-23  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.000457845  n/a   
 
 
-
 
NC_013173  Dbac_0926  binding-protein-dependent transport systems inner membrane component  35.07 
 
 
249 aa  109  4.0000000000000004e-23  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.04587  n/a   
 
 
-
 
NC_011898  Ccel_0879  binding-protein-dependent transport systems inner membrane component  28.97 
 
 
274 aa  110  4.0000000000000004e-23  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00112224  n/a   
 
 
-
 
NC_010172  Mext_1719  binding-protein-dependent transport systems inner membrane component  33.73 
 
 
264 aa  109  4.0000000000000004e-23  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4522  binding-protein-dependent transport systems inner membrane component  35.78 
 
 
329 aa  110  4.0000000000000004e-23  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0666  binding-protein-dependent transport systems inner membrane component  37.26 
 
 
272 aa  110  4.0000000000000004e-23  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2038  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
264 aa  109  5e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.697058  normal  0.743835 
 
 
-
 
NC_013521  Sked_02100  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  31.4 
 
 
308 aa  108  8.000000000000001e-23  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1643  binding-protein-dependent transport systems inner membrane component  38.08 
 
 
259 aa  108  1e-22  Conexibacter woesei DSM 14684  Bacteria  normal  0.805205  normal  0.60128 
 
 
-
 
NC_013235  Namu_1668  binding-protein-dependent transport systems inner membrane component  32.16 
 
 
288 aa  107  2e-22  Nakamurella multipartita DSM 44233  Bacteria  normal  0.173855  normal  0.365472 
 
 
-
 
NC_011369  Rleg2_3645  binding-protein-dependent transport systems inner membrane component  30.42 
 
 
268 aa  106  3e-22  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_3330  ABC transporter membrane spanning protein  27.31 
 
 
295 aa  107  3e-22  Agrobacterium vitis S4  Bacteria  normal  0.730487  n/a   
 
 
-
 
NC_009485  BBta_1169  putative ABC transporter permease protein  33.53 
 
 
279 aa  107  3e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3871  binding-protein-dependent transport systems inner membrane component  30.04 
 
 
280 aa  106  4e-22  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.208081  n/a   
 
 
-
 
NC_013517  Sterm_2064  binding-protein-dependent transport systems inner membrane component  30.66 
 
 
254 aa  105  7e-22  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.00112586  n/a   
 
 
-
 
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