Gene Cphy_1151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1151 
Symbol 
ID5742874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1450218 
End bp1450982 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content39% 
IMG OID641292256 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001558268 
Protein GI160879300 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGAAAAA AGTTACGAAA CACCATCAGA ACTAAACTAC CTTCCTTTAG TGCAATATTT 
GGAATCTTAG CCCTTTGGCA GATAGTCTCA AGCATTGGTT GGGTGCCAAA GTATATGCTT
CCATCTCCGG TAGATGTTGT TCTAGCGTTC GTAAAAGAGT TCCCCCTCTT AATGTCACAT
ATGAGGGTAA CCTTGGTGGA AGCATTTTTT GGCTTATTAT TAGGGACTCT TCTGGGATTT
ACAATTGCAG TTTGGATGGA GAGGTTTCCG AAAGTTTATC AAGCGTTCTA TCCAGTAATT
GTTATAACGC AAACCGTACC TACCGTTGCG ATAGCGCCTC TGTTAGTGTT GTGGTTAGGT
TATGGAATGG CTCCCAAAAT AGTACTAATT ATCATAGTAA CGTTTTTCCC TATCACAGTA
GGGCTCTTGG ATGGATTTCA TTCTGCGGAC AAGGATGCTA TTCAGTTGTT GCGTTCTATG
GGAGCAACGA AATTCCAGAT ATTTCGTCAA ATCAAATTAC CTAGTTCATT AAGTTATTTT
TTTGCTAGCT TAAAAATATC TGCATCTTAT TCCGTTGTAG GTGCGGTAAT TTCGGAATGG
CTCGGCGGTT TTCATGGGCT CGGAGTTTAT ATGACGCGAG TAAAAAAATC CTATGCTTTC
GATAAAATGT TTGCGGTTAT TTTCTTGATA TCAGCGATAA GTCTTTTGTT AATGAAGCTG
GTGGGTTACT TAAAAAAACG ATGCATGCCT TGGGAAGAGA AATAA
 
Protein sequence
MRKKLRNTIR TKLPSFSAIF GILALWQIVS SIGWVPKYML PSPVDVVLAF VKEFPLLMSH 
MRVTLVEAFF GLLLGTLLGF TIAVWMERFP KVYQAFYPVI VITQTVPTVA IAPLLVLWLG
YGMAPKIVLI IIVTFFPITV GLLDGFHSAD KDAIQLLRSM GATKFQIFRQ IKLPSSLSYF
FASLKISASY SVVGAVISEW LGGFHGLGVY MTRVKKSYAF DKMFAVIFLI SAISLLLMKL
VGYLKKRCMP WEEK