Gene BBta_1263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1263 
Symbol 
ID5156297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1344312 
End bp1345100 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content66% 
IMG OID640556250 
ProductABC transporter permease 
Protein accessionYP_001237409 
Protein GI148252824 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.165267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGTCCG AAGCCTTTAT CCGCATCGCC GCGCCGCTCG GCGTCGGCAT CGTCATGGTC 
GGGCTCTGGG AGATCGGCTT TCGCCTTGCA GCCGTGCCGG TGTACCTGTT CCCGAAACCG
AGCGACATCG TCGCGAGCTT TATGCAGCAT GGCCCGGCCC TGCTCCGCGC GCTGCTGGTG
ACCCTGCGCA TCACGCTGCA GGCCTTTGCA GCCGCCGTGC TGCTCGGTAC GCTGATCGCC
TTCATGTTCG TGCAGAGCCG GGCCATCGAG ATCAGCCTGT TTCCCTATGC CGTGCTGCTG
CAGGTGACGC CGGTGGTGGC GATTGCGCCG CTGATCATCA TCCTGGTCAA GAACACCCAG
CTCTCGCTCA CGATCTGCGC GACGCTGGTC GCGCTGTTTC CGATCATCTC CAACACCACG
CTCGGCCTGC GCAGCGTCGA TCCGGGCCTC GCCAACTACT TCCGCATGAA CCGGGCGAGC
CGGCTGAAGA CGCTCATCAA GCTGCGCATC CCGGGCGCGC TGCCCTACTT CTTCGGCGGC
CTGCGCATCT CCAGCGGCCT CGCGCTGATC GGCGCGGTCG TCGCCGAGTT CGTCGCCGGC
ACCGGCGGGC GCTCGTCGGG ACTGGCCTAT GAGATCCTCG ACGCCGGCTT CACATTGGAC
ATTCCCCGCA TGTTCGCGGC GCTCTTCCTG ATCACGCTGA CCGGCGTCGC GTTGTTCGCG
ATCATGGTGG CGGTGTCGCG GCTGGCGCTG TCGAGCTGGC ACGAGAGCGA GATCGGCGCC
GAGACATGA
 
Protein sequence
MQSEAFIRIA APLGVGIVMV GLWEIGFRLA AVPVYLFPKP SDIVASFMQH GPALLRALLV 
TLRITLQAFA AAVLLGTLIA FMFVQSRAIE ISLFPYAVLL QVTPVVAIAP LIIILVKNTQ
LSLTICATLV ALFPIISNTT LGLRSVDPGL ANYFRMNRAS RLKTLIKLRI PGALPYFFGG
LRISSGLALI GAVVAEFVAG TGGRSSGLAY EILDAGFTLD IPRMFAALFL ITLTGVALFA
IMVAVSRLAL SSWHESEIGA ET