Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1263 |
Symbol | |
ID | 5156297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 1344312 |
End bp | 1345100 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640556250 |
Product | ABC transporter permease |
Protein accession | YP_001237409 |
Protein GI | 148252824 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.165267 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCAGTCCG AAGCCTTTAT CCGCATCGCC GCGCCGCTCG GCGTCGGCAT CGTCATGGTC GGGCTCTGGG AGATCGGCTT TCGCCTTGCA GCCGTGCCGG TGTACCTGTT CCCGAAACCG AGCGACATCG TCGCGAGCTT TATGCAGCAT GGCCCGGCCC TGCTCCGCGC GCTGCTGGTG ACCCTGCGCA TCACGCTGCA GGCCTTTGCA GCCGCCGTGC TGCTCGGTAC GCTGATCGCC TTCATGTTCG TGCAGAGCCG GGCCATCGAG ATCAGCCTGT TTCCCTATGC CGTGCTGCTG CAGGTGACGC CGGTGGTGGC GATTGCGCCG CTGATCATCA TCCTGGTCAA GAACACCCAG CTCTCGCTCA CGATCTGCGC GACGCTGGTC GCGCTGTTTC CGATCATCTC CAACACCACG CTCGGCCTGC GCAGCGTCGA TCCGGGCCTC GCCAACTACT TCCGCATGAA CCGGGCGAGC CGGCTGAAGA CGCTCATCAA GCTGCGCATC CCGGGCGCGC TGCCCTACTT CTTCGGCGGC CTGCGCATCT CCAGCGGCCT CGCGCTGATC GGCGCGGTCG TCGCCGAGTT CGTCGCCGGC ACCGGCGGGC GCTCGTCGGG ACTGGCCTAT GAGATCCTCG ACGCCGGCTT CACATTGGAC ATTCCCCGCA TGTTCGCGGC GCTCTTCCTG ATCACGCTGA CCGGCGTCGC GTTGTTCGCG ATCATGGTGG CGGTGTCGCG GCTGGCGCTG TCGAGCTGGC ACGAGAGCGA GATCGGCGCC GAGACATGA
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Protein sequence | MQSEAFIRIA APLGVGIVMV GLWEIGFRLA AVPVYLFPKP SDIVASFMQH GPALLRALLV TLRITLQAFA AAVLLGTLIA FMFVQSRAIE ISLFPYAVLL QVTPVVAIAP LIIILVKNTQ LSLTICATLV ALFPIISNTT LGLRSVDPGL ANYFRMNRAS RLKTLIKLRI PGALPYFFGG LRISSGLALI GAVVAEFVAG TGGRSSGLAY EILDAGFTLD IPRMFAALFL ITLTGVALFA IMVAVSRLAL SSWHESEIGA ET
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