| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0620 |
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| Symbol | |
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| ID | 7973605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 676638 |
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| End bp | 677414 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791227 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002942548 |
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| Protein GI | 239813638 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCGC TTGTGTCCGC ACTGAAACGG TGTGCCTATC CCGTGGCCGG CCTTGGGCTG
GCCCTGGTCT TATGGCAGGC CATCTGCGTG TTCGCCGCGC TGCCGACGGC CGTGCTGCCC
ACGCCCTGGC AGGTGCTGCA GGCCACTGTG CAGTACTGGC CCGCCCTGGT CGAGGATGGA
TGGACCACGT TCAAGGCCAC CTTGTACGGC TTCATCCTGG CCTTGGTGCT GGGCATCCCG
CTGGCGGTGG CCGTGTCCAC TTTCCGCTTG ATCAACCTGA TGTTCTATCC CCTGCTGGTC
GCGCTGCAGT CAGTGCCCAA GGTCGCGCTG GCCCCACTGC TGCTCGTCTG GCTGGGCACC
GGCATGGAAT CCAAGCTTGC CATCGCCTGG CTGGTGGCCT TCTTCCCGAT CGTGGTGGAC
ACGGCCGCGG GCCTGCAGTC CACCCCAAAA GAACTGCTGG AGCTGGCACG CAGCCTGCGC
GCCTCGCCCT GGCAACTCTT CGCCAAGGTG CGCTTCCCAG CCGCCCTGCC CTTCGTGGTC
ACGGGCGCCA AAGTCGCGGT GACGCTGGCC GTCATCGGCG CCGTGATTGG CGAGTTCGTC
GGCTCCAGCG AAGGCCTGGG CTTCCTGCTG CTCAGCGCCA CCTCGCAGAT CAACACTCCC
CTGGCCTTCG CGGCCCTCTT CGCACTGTCG GCGCTAGGCA TGGCTACCTA TTTCATGGTC
GTCCTGGCCG AACGGGCGAT CGCTGGTTGG CTGCCGCCCG CGCCGCCTGC CCATTAA
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| Protein sequence | MNPLVSALKR CAYPVAGLGL ALVLWQAICV FAALPTAVLP TPWQVLQATV QYWPALVEDG
WTTFKATLYG FILALVLGIP LAVAVSTFRL INLMFYPLLV ALQSVPKVAL APLLLVWLGT
GMESKLAIAW LVAFFPIVVD TAAGLQSTPK ELLELARSLR ASPWQLFAKV RFPAALPFVV
TGAKVAVTLA VIGAVIGEFV GSSEGLGFLL LSATSQINTP LAFAALFALS ALGMATYFMV
VLAERAIAGW LPPAPPAH
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