| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2627 |
|---|
| Symbol | |
|---|
| ID | 8326816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 2959399 |
|---|
| End bp | 2960265 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644943167 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003100408 |
|---|
| Protein GI | 256376748 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.752734 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCGA TCGAGGACAA GCCCACCGTG CGCGTCGACC TCGCGGGCGT GGGCAAGACC
GGCAAGTCGT CCCGCAAGCC GGGGCAGTCC AAGCTCAAGG CCGCGCTGCA CCCCAAGGTG
TGGTCCCCGC TGGCCGTGAT GCTCGTGGTG CTGGGCTTCG TGTGGGAGCG GACGGCGGAG
ACCATGCCGT ACCTGCTCCC CCACCTCAAC AAGGTGGGCG CGGCGCTCAC GAAGGACCCC
GCGAAGTTCT TCGACAACGC GTGGTGGACG CTGCAGGAGG CCATGGTCGG CCTGCTGATC
GGCTTCACCG CCGCGTTCGT GCTCGCGGTG CTGACCAGCG AGTGGGGCGT CGCCCGCAGG
GCGGTCATGC CGATCGCGGT GGTGCTGAAC GTGACCCCGC TGGTCGCGAT CGCCCCCGTG
CTGGTGGTGG CCTTCGGCTT CGGTCCCGAG CCCAAGCTGA TCGTGACGGC GCTGATCTGC
TTCTTCACCC TGCTGATCAA CATCTCGACG GGCCTGCGGT CCGTGCCGCC CGCGGTGCTC
CAGGTGTACC AGACCGTCCG GGCCTCCCGG TGGGAGATGC TCTGGCGCAT CCGCATCCCC
AACGCGCTGC CGTACATCTT CGCCGGGCTG CGCATCGCGT TCCCGCTGTC GATCGTCGGC
GCCGTGGTGG CCGAGATGTC CGCGCCAGGG GCCTCGCTGG GCCTCGGCAC GATCATCAGC
ATCTCGTCGT CGATGAACCG GCTCGACATG GTCTTCGCCT CGATCACGAT CCTGGCGGTC
ATGGGCTCGC TGCTGCTGCT CGTGGTGACC ACCGTCGAGC GCAAGGTCCT GCACTGGCAC
GAGTCCACCA AGCAGGGCGC CAAGTAG
|
|---|
| Protein sequence | MTSIEDKPTV RVDLAGVGKT GKSSRKPGQS KLKAALHPKV WSPLAVMLVV LGFVWERTAE
TMPYLLPHLN KVGAALTKDP AKFFDNAWWT LQEAMVGLLI GFTAAFVLAV LTSEWGVARR
AVMPIAVVLN VTPLVAIAPV LVVAFGFGPE PKLIVTALIC FFTLLINIST GLRSVPPAVL
QVYQTVRASR WEMLWRIRIP NALPYIFAGL RIAFPLSIVG AVVAEMSAPG ASLGLGTIIS
ISSSMNRLDM VFASITILAV MGSLLLLVVT TVERKVLHWH ESTKQGAK
|
|---|
| |