Gene Daci_1140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1140 
Symbol 
ID5746695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1268791 
End bp1269558 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content66% 
IMG OID641296220 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001562170 
Protein GI160896588 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAGA AATACGCGGA ACGCTGGGCG CCTTGGGTGC TGCTGCTGGC GGTCATCCTG 
CTGTGGCAGG TCATCTGCTC GGCCTTCGAG GTCTCGGAAT TCATCTTCCC CAGCCCCTGG
GCCATCGGCC GGCAACTGGC CGAGTTCAGC GGCATCATCG CCGCCCACGC CTGGCGCACC
TACTGGGTGA CCATGGCGGG CTTTGGCATC GCCATCGTGG TGGGCGTGCT GCTGGGCTTT
CTGATCGGCT CCTCGCGCCT GGCCTATGCG GCGTTCTATC CGCTGATGAC GGCCTTCAAC
GCCTTGCCCA AGGCGGCCTT CGTGCCCATC CTGGTGGTCT GGTTCGGCAT CGGCGCGGGA
CCGGCCATCC TCACGGCCTT CCTGATCAGC TTCTTTCCCA TCATGGTCAA CATCGCCACC
GGCCTGGCCA CGCTGGAGCC CGAGCTGGAG GATGTGCTGC GCGTGCTGGG CGCCCGGCGC
TGGGACGTGC TGATCAAGGT CGGCCTGCCG CGCTCCATGC CCTACTTCTA CGGCTCACTG
AAGGTGGCGA TCACGCTGGC CTTCGTGGGC ACCACGGTCA GCGAGATGAC GGCGGCCAAC
GAAGGCATCG GCTACCTGCT GGTGTCGGCC GGCTCGTCCA TGCAGATGGG CCTGGCCTTT
GCCGGCCTGA TCGTGGTGGG CGCCATGGCC ATGGTCATGT ACGAGCTGTT CAGCGCCATC
GAAAAGCGCA CCACCGGCTG GGCCCGGCGC GGCTCGCAGG GCGAGTGA
 
Protein sequence
MHKKYAERWA PWVLLLAVIL LWQVICSAFE VSEFIFPSPW AIGRQLAEFS GIIAAHAWRT 
YWVTMAGFGI AIVVGVLLGF LIGSSRLAYA AFYPLMTAFN ALPKAAFVPI LVVWFGIGAG
PAILTAFLIS FFPIMVNIAT GLATLEPELE DVLRVLGARR WDVLIKVGLP RSMPYFYGSL
KVAITLAFVG TTVSEMTAAN EGIGYLLVSA GSSMQMGLAF AGLIVVGAMA MVMYELFSAI
EKRTTGWARR GSQGE