| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0654 |
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| Symbol | |
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| ID | 8709850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 735642 |
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| End bp | 736433 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 646482760 |
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| Product | ABC transporter, permease protein |
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| Protein accession | YP_003373884 |
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| Protein GI | 283783130 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAT CGCGTTTTAA ACGTATGCTA ATTAAATATC TGCCAACTGT ATTTTCTGTA
ATAGTTTTAC TTGTTTTTTG GCAGTACGCA TGCGAATATT ATAAAATTTC GGAAAATTTG
ATTCCAACAC CATCTTCAAT TGCTCAATCA ACAGCTGACG CTTTGCCAAC TCTATTACCT
GCAGCATTAA TTACAACACA AGAAACAGTT ATCGGTTTTT CTATTGCAAT AGTAGTTGGA
ATTCTTTTAG GTGTTATTTT CCATGTTTGT AAGCTTGTTA AATCTGCTTT ATTCCCGCTT
TTATGCGCAG CGCAAACTAT GCCATTAATT TCTATTGCGC CAATTTTTTT GATTTGGTTT
GGTTTTGAAA TATCTGGAAA AATTGTAATA GTAATGGTTT TCAGCATGTT CCCTATTGCT
GTGCAAACTA TACGAGGTCT TGACGCTGTT CCAAGTTTTT ATACAGATGT TGCTTTAACT
TGTGGAGCAA GCAGAACTTG GACTTTGTGG CATGTTAAAT TAAGAGTTGC AGCTCGCCAA
ATTTTTGGTG GCATACGCAT TAGTGCAGCT TATGTTTTTG GAACTGCTTC AACTGCAGAA
TATTTGGGAG CCAAAGATGG GCTAGGAATT TGGCTTCAAT TCGCTTATAA CTCATTTAGA
ACACCACTTA TTTTTTCTGC AACAATAGTA ATAATAATTC TTACTGCGCT TCTTATGTGC
ATCGTTAACG TTTGTGAAAG AATTCTGCTT GGCTCAGCAG ACGAAGATGA GGATCCAGAT
AACCAATTGT GA
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| Protein sequence | MTQSRFKRML IKYLPTVFSV IVLLVFWQYA CEYYKISENL IPTPSSIAQS TADALPTLLP
AALITTQETV IGFSIAIVVG ILLGVIFHVC KLVKSALFPL LCAAQTMPLI SIAPIFLIWF
GFEISGKIVI VMVFSMFPIA VQTIRGLDAV PSFYTDVALT CGASRTWTLW HVKLRVAARQ
IFGGIRISAA YVFGTASTAE YLGAKDGLGI WLQFAYNSFR TPLIFSATIV IIILTALLMC
IVNVCERILL GSADEDEDPD NQL
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