Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1095 |
Symbol | |
ID | 6160931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 1167552 |
End bp | 1168319 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641663849 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001790129 |
Protein GI | 171057780 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAAC GCCGACTCGA ACAGGCATCG CCGTGGATCC TGCTGGTCTT CACGTTGCTG GTCTGGCAGA TGCTGTGCAC CGGATTCAAG GTCTCGGCGT TCATCTTCCC GAGCCCGGCC GACATCGCCG CAGCGCTGGT CGAACACAGC GCGCTGGTGG CCGGCCACGC CTGGCGCACG TTCTGGGTGA CGATGGCGGG CTTCGGTCTG TCGATCGTGG TGGGGGTGCT GCTGGGTTTC CTGATCGGCA GTTCGCGTGT GGCCTATACC GCCGTCTACC CGCTGATGAC GGCCTTCAAC GCCCTGCCCA AAGCCGCGTT CGTGCCGATC CTGGTGGTGT GGTTCGGCAT CGGCGCGGGG CCGGCGATCC TGACGGCGTT CCTGATCAGC TTCTTCCCGA TCATGGTCAA CATCGCCACC GGCCTGGCCA CGCTCGAGCC CGAACTCGAA GACGTGCTGC GGGTGCTGGG CGCCAGGCGC TGGGATGTGC TGATGAAGGT CGGCCTGCCG CGGTCGCTGC CGTATTTCTA CGGCTCGCTG AAAGTGGCGA TCACGCTGGC GTTTGTCGGC ACCACCGTCA GCGAGATGAC CGCCGCCAAC GAAGGCATCG GCTATCTGCT GATCAGCGCC GGCAGCTCCA TGCAGATGGG CCTGGCGTTT GCCGGCCTGG TGGTGGTCGG TGCGATGGCG ATGTTGATGT ACGAGTTCTT CTCGGTGGTG GAAAAGCGCA CCACCGGCTG GGCTCACCGT GGCTCGCACA ACGGTTGA
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Protein sequence | MKQRRLEQAS PWILLVFTLL VWQMLCTGFK VSAFIFPSPA DIAAALVEHS ALVAGHAWRT FWVTMAGFGL SIVVGVLLGF LIGSSRVAYT AVYPLMTAFN ALPKAAFVPI LVVWFGIGAG PAILTAFLIS FFPIMVNIAT GLATLEPELE DVLRVLGARR WDVLMKVGLP RSLPYFYGSL KVAITLAFVG TTVSEMTAAN EGIGYLLISA GSSMQMGLAF AGLVVVGAMA MLMYEFFSVV EKRTTGWAHR GSHNG
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