More than 300 homologs were found in PanDaTox collection
for query gene Rleg_3297 on replicon NC_012850
Organism: Rhizobium leguminosarum bv. trifolii WSM1325



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012850  Rleg_3297  binding-protein-dependent transport systems inner membrane component  100 
 
 
375 aa  733    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.149558 
 
 
-
 
NC_011369  Rleg2_3042  binding-protein-dependent transport systems inner membrane component  91.2 
 
 
375 aa  681    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_2046  binding-protein-dependent transport systems inner membrane component  73.68 
 
 
286 aa  401  1e-111  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2372  binding-protein-dependent transport systems inner membrane component  70.91 
 
 
289 aa  391  1e-108  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.239724 
 
 
-
 
NC_011989  Avi_3460  ABC transporter membrane spanning protein  69.15 
 
 
288 aa  390  1e-107  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0344  binding-protein-dependent transport systems inner membrane component  70.85 
 
 
286 aa  386  1e-106  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.113814  n/a   
 
 
-
 
NC_008044  TM1040_1494  binding-protein-dependent transport systems inner membrane component  64.6 
 
 
281 aa  348  7e-95  Ruegeria sp. TM1040  Bacteria  normal  0.58323  normal 
 
 
-
 
NC_010172  Mext_1731  binding-protein-dependent transport systems inner membrane component  64.38 
 
 
321 aa  340  2e-92  Methylobacterium extorquens PA1  Bacteria  normal  0.443029  normal 
 
 
-
 
NC_011757  Mchl_2050  binding-protein-dependent transport systems inner membrane component  64.04 
 
 
321 aa  340  2e-92  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.577348 
 
 
-
 
NC_010725  Mpop_1083  binding-protein-dependent transport systems inner membrane component  62.71 
 
 
321 aa  331  1e-89  Methylobacterium populi BJ001  Bacteria  normal  0.148611  normal  0.032179 
 
 
-
 
NC_009952  Dshi_1373  binding-protein-dependent transport systems inner membrane component  63.95 
 
 
303 aa  326  3e-88  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.674946  normal  0.833857 
 
 
-
 
NC_009485  BBta_6031  putative ABC transporter, permease protein  64.9 
 
 
325 aa  325  6e-88  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_1465  binding-protein-dependent transport systems inner membrane component  66.14 
 
 
283 aa  321  9.999999999999999e-87  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0180  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  66.13 
 
 
283 aa  317  2e-85  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.105797  n/a   
 
 
-
 
NC_009049  Rsph17029_1813  binding-protein-dependent transport systems inner membrane component  66.13 
 
 
283 aa  316  4e-85  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.210707  normal  0.296576 
 
 
-
 
NC_007643  Rru_A3455  binding-protein dependent transport system inner membrane protein  59.56 
 
 
322 aa  305  1.0000000000000001e-81  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.833863  n/a   
 
 
-
 
NC_012880  Dd703_0037  binding-protein-dependent transport systems inner membrane component  55.56 
 
 
362 aa  277  2e-73  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2700  binding-protein-dependent transport systems inner membrane component  58.37 
 
 
316 aa  273  4.0000000000000004e-72  Jannaschia sp. CCS1  Bacteria  normal  0.505407  normal  0.565906 
 
 
-
 
NC_013946  Mrub_1883  binding-protein-dependent transport systems inner membrane component  48.71 
 
 
322 aa  213  3.9999999999999995e-54  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.167871 
 
 
-
 
NC_014212  Mesil_2099  binding-protein-dependent transport systems inner membrane component  47.37 
 
 
306 aa  208  1e-52  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  35.34 
 
 
261 aa  134  3e-30  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_009719  Plav_0891  binding-protein-dependent transport systems inner membrane component  31.62 
 
 
268 aa  129  8.000000000000001e-29  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.223421 
 
 
-
 
NC_013525  Tter_1221  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
246 aa  128  2.0000000000000002e-28  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009523  RoseRS_0669  binding-protein-dependent transport systems inner membrane component  35.8 
 
 
272 aa  124  2e-27  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0848141 
 
 
-
 
NC_009767  Rcas_0666  binding-protein-dependent transport systems inner membrane component  36.55 
 
 
272 aa  124  3e-27  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3118  binding-protein dependent transport system inner membrane protein  33.33 
 
 
284 aa  122  9e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_3116  binding-protein-dependent transport systems inner membrane component  34.93 
 
 
272 aa  122  9.999999999999999e-27  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.025765  normal 
 
 
-
 
NC_013165  Shel_13670  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  31.38 
 
 
249 aa  119  6e-26  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4254  binding-protein-dependent transport systems inner membrane component  31.05 
 
 
283 aa  118  9.999999999999999e-26  Conexibacter woesei DSM 14684  Bacteria  normal  0.0441349  normal  0.902161 
 
 
-
 
NC_014210  Ndas_4504  binding-protein-dependent transport systems inner membrane component  31.51 
 
 
281 aa  115  1.0000000000000001e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0620  binding-protein-dependent transport systems inner membrane component  31.33 
 
 
258 aa  115  2.0000000000000002e-24  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_02100  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  32.29 
 
 
308 aa  114  3e-24  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0403  binding-protein-dependent transport systems inner membrane component  30 
 
 
271 aa  113  5e-24  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_005945  BAS0693  ABC transporter permease  31.85 
 
 
250 aa  112  9e-24  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0804  putative ABC transporter, permease protein  31.85 
 
 
250 aa  112  9e-24  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.22036e-46 
 
 
-
 
NC_007530  GBAA_0727  ABC transporter permease  31.85 
 
 
250 aa  112  9e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0363276  n/a   
 
 
-
 
NC_005957  BT9727_0637  ABC transporter, permease  31.85 
 
 
250 aa  112  1.0000000000000001e-23  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00537874  n/a   
 
 
-
 
NC_006274  BCZK0637  ABC transporter, permease  31.85 
 
 
250 aa  112  1.0000000000000001e-23  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3112  binding-protein-dependent transport systems inner membrane component  35.47 
 
 
253 aa  112  1.0000000000000001e-23  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0371548 
 
 
-
 
NC_009921  Franean1_3131  binding-protein-dependent transport systems inner membrane component  33.69 
 
 
281 aa  112  1.0000000000000001e-23  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2627  binding-protein-dependent transport systems inner membrane component  29.89 
 
 
288 aa  112  1.0000000000000001e-23  Actinosynnema mirum DSM 43827  Bacteria  normal  0.752734  n/a   
 
 
-
 
NC_010172  Mext_1719  binding-protein-dependent transport systems inner membrane component  33.62 
 
 
264 aa  111  2.0000000000000002e-23  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_0643  binding-protein-dependent transport systems inner membrane component  31.85 
 
 
251 aa  111  2.0000000000000002e-23  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1862  binding-protein-dependent transport systems inner membrane component  30.9 
 
 
257 aa  111  2.0000000000000002e-23  Variovorax paradoxus S110  Bacteria  normal  0.116723  n/a   
 
 
-
 
NC_003909  BCE_0797  ABC transporter, permease protein, putative  31.85 
 
 
250 aa  110  3e-23  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0784  putative ABC transporter, permease protein  31.85 
 
 
250 aa  110  3e-23  Bacillus cereus B4264  Bacteria  normal  0.605831  n/a   
 
 
-
 
NC_012792  Vapar_6052  binding-protein-dependent transport systems inner membrane component  28.76 
 
 
274 aa  110  3e-23  Variovorax paradoxus S110  Bacteria  normal  0.0454164  n/a   
 
 
-
 
NC_007802  Jann_3753  binding-protein-dependent transport systems inner membrane component  29.31 
 
 
268 aa  110  4.0000000000000004e-23  Jannaschia sp. CCS1  Bacteria  normal  0.333865  normal 
 
 
-
 
NC_011757  Mchl_2038  binding-protein-dependent transport systems inner membrane component  32.33 
 
 
264 aa  110  5e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.697058  normal  0.743835 
 
 
-
 
NC_008786  Veis_0620  binding-protein-dependent transport systems inner membrane component  31.3 
 
 
254 aa  109  6e-23  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.63161  normal 
 
 
-
 
NC_007406  Nwi_0333  binding-protein dependent transport system inner membrane protein  31.44 
 
 
278 aa  109  7.000000000000001e-23  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_2296  binding-protein-dependent transport systems inner membrane component  31.45 
 
 
250 aa  109  7.000000000000001e-23  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7629  putative ABC transporter permease protein  34.31 
 
 
282 aa  109  8.000000000000001e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.262472  normal  0.441686 
 
 
-
 
NC_012669  Bcav_3788  binding-protein-dependent transport systems inner membrane component  33.03 
 
 
317 aa  109  9.000000000000001e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0255815  normal 
 
 
-
 
NC_009669  Oant_4580  binding-protein-dependent transport systems inner membrane component  31.93 
 
 
257 aa  109  9.000000000000001e-23  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3934  binding-protein-dependent transport systems inner membrane component  31.47 
 
 
278 aa  108  1e-22  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.421742  normal 
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  33.07 
 
 
273 aa  108  2e-22  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2116  binding-protein-dependent transport systems inner membrane component  29.74 
 
 
253 aa  108  2e-22  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0877  binding-protein-dependent transport systems inner membrane component  28.29 
 
 
260 aa  108  2e-22  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.00000000112184  n/a   
 
 
-
 
NC_011658  BCAH187_A0881  putative ABC transporter, permease protein  31.64 
 
 
251 aa  107  3e-22  Bacillus cereus AH187  Bacteria  hitchhiker  0.00328051  n/a   
 
 
-
 
NC_013235  Namu_1668  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
288 aa  107  3e-22  Nakamurella multipartita DSM 44233  Bacteria  normal  0.173855  normal  0.365472 
 
 
-
 
NC_011365  Gdia_3269  binding-protein-dependent transport systems inner membrane component  33.49 
 
 
253 aa  107  4e-22  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.283078  normal 
 
 
-
 
NC_011772  BCG9842_B4547  putative ABC transporter, permease protein  31.05 
 
 
251 aa  107  4e-22  Bacillus cereus G9842  Bacteria  normal  0.113137  normal  0.441246 
 
 
-
 
NC_007509  Bcep18194_C7650  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  32.08 
 
 
247 aa  106  6e-22  Burkholderia sp. 383  Bacteria  normal  0.621765  normal 
 
 
-
 
NC_010725  Mpop_1095  binding-protein-dependent transport systems inner membrane component  32.13 
 
 
264 aa  106  7e-22  Methylobacterium populi BJ001  Bacteria  normal  0.0240883  normal  0.166534 
 
 
-
 
NC_009485  BBta_1169  putative ABC transporter permease protein  32.08 
 
 
279 aa  106  7e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0770  binding-protein-dependent transport systems inner membrane component  30.71 
 
 
273 aa  105  1e-21  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3810  binding-protein-dependent transport systems inner membrane component  30.87 
 
 
258 aa  105  1e-21  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.42897 
 
 
-
 
NC_007958  RPD_0258  binding-protein-dependent transport systems inner membrane component  31.17 
 
 
274 aa  105  1e-21  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.750925 
 
 
-
 
NC_007964  Nham_0427  binding-protein-dependent transport systems inner membrane component  31.44 
 
 
279 aa  105  1e-21  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_5406  ABC transporter membrane spanning protein  29.71 
 
 
251 aa  105  1e-21  Agrobacterium vitis S4  Bacteria  normal  0.408693  n/a   
 
 
-
 
NC_011004  Rpal_0469  binding-protein-dependent transport systems inner membrane component  30 
 
 
274 aa  105  2e-21  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.858995  n/a   
 
 
-
 
NC_009952  Dshi_2545  binding-protein-dependent transport system protein  31.54 
 
 
287 aa  104  2e-21  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.240068  normal  0.521676 
 
 
-
 
NC_014151  Cfla_3017  binding-protein-dependent transport systems inner membrane component  33.2 
 
 
253 aa  104  3e-21  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.946292  normal 
 
 
-
 
NC_007953  Bxe_C0801  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  29.15 
 
 
298 aa  103  4e-21  Burkholderia xenovorans LB400  Bacteria  normal  0.0745387  normal 
 
 
-
 
NC_013515  Smon_0476  binding-protein-dependent transport systems inner membrane component  25.69 
 
 
249 aa  103  7e-21  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_008254  Meso_0814  binding-protein-dependent transport systems inner membrane component  30.04 
 
 
270 aa  102  7e-21  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2867  binding-protein-dependent transport systems inner membrane component  29.41 
 
 
277 aa  102  8e-21  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1933  binding-protein-dependent transport systems inner membrane component  29.03 
 
 
255 aa  102  9e-21  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.323499  n/a   
 
 
-
 
NC_012669  Bcav_2574  binding-protein-dependent transport systems inner membrane component  33.17 
 
 
252 aa  102  1e-20  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013743  Htur_0669  binding-protein-dependent transport systems inner membrane component  34.65 
 
 
258 aa  102  1e-20  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_011369  Rleg2_3645  binding-protein-dependent transport systems inner membrane component  30.8 
 
 
268 aa  102  1e-20  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_0614  binding-protein-dependent transport systems inner membrane component  29.92 
 
 
250 aa  102  1e-20  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_4268  binding-protein-dependent transport systems inner membrane component  32.62 
 
 
282 aa  100  3e-20  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0113678 
 
 
-
 
NC_011831  Cagg_1308  binding-protein-dependent transport systems inner membrane component  34.36 
 
 
254 aa  100  4e-20  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.0000169849 
 
 
-
 
NC_008726  Mvan_3142  binding-protein-dependent transport systems inner membrane component  31.72 
 
 
264 aa  100  5e-20  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.32312  normal  0.0411868 
 
 
-
 
NC_008148  Rxyl_2084  binding-protein-dependent transport systems inner membrane component  34.34 
 
 
260 aa  99.8  6e-20  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.566245  n/a   
 
 
-
 
NC_013946  Mrub_1884  binding-protein-dependent transport systems inner membrane component  35.03 
 
 
307 aa  99.8  7e-20  Meiothermus ruber DSM 1279  Bacteria  normal  0.665089  normal  0.160596 
 
 
-
 
NC_007951  Bxe_A2015  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  28.69 
 
 
252 aa  99.8  8e-20  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_2761  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
258 aa  99.8  8e-20  Conexibacter woesei DSM 14684  Bacteria  normal  0.165765  normal  0.0247635 
 
 
-
 
NC_010681  Bphyt_1488  binding-protein-dependent transport systems inner membrane component  31.2 
 
 
247 aa  99.4  1e-19  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_0572  binding-protein-dependent transport systems inner membrane component  32.68 
 
 
276 aa  99.4  1e-19  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2100  binding-protein-dependent transport systems inner membrane component  35.39 
 
 
275 aa  97.4  3e-19  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009524  PsycPRwf_1445  binding-protein-dependent transport systems inner membrane component  25.5 
 
 
259 aa  97.8  3e-19  Psychrobacter sp. PRwf-1  Bacteria  normal  normal  0.318112 
 
 
-
 
NC_013457  VEA_000865  hydroxymethylpyrimidine ABC transporter transmembrane component  29.96 
 
 
266 aa  97.4  4e-19  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_3877  binding-protein-dependent transport systems inner membrane component  32.2 
 
 
282 aa  97.1  4e-19  Salinispora tropica CNB-440  Bacteria  normal  0.901388  normal 
 
 
-
 
NC_009654  Mmwyl1_2703  binding-protein-dependent transport systems inner membrane component  29.24 
 
 
263 aa  96.7  6e-19  Marinomonas sp. MWYL1  Bacteria  normal  0.88688  normal 
 
 
-
 
NC_013521  Sked_17280  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  31.25 
 
 
325 aa  96.3  7e-19  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.158115  normal  0.544115 
 
 
-
 
NC_012791  Vapar_4760  binding-protein-dependent transport systems inner membrane component  26.15 
 
 
267 aa  96.3  7e-19  Variovorax paradoxus S110  Bacteria  normal  0.318809  n/a   
 
 
-
 
NC_009668  Oant_3871  binding-protein-dependent transport systems inner membrane component  28.68 
 
 
280 aa  96.3  8e-19  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.208081  n/a   
 
 
-
 
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