| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3460 |
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| Symbol | |
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| ID | 7387062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2864427 |
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| End bp | 2865293 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643652308 |
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| Product | ABC transporter membrane spanning protein |
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| Protein accession | YP_002550491 |
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| Protein GI | 222149534 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGGGT ATCTGCTGTT TGCGCTGATC TTCTGGCTTG TCGCATGGGG CGTGAACGAA
TGGCTGGTGC GCCAACATTT CGCTGCCCTG CCCGCCCAGC GTGCCGCCAA TATTGCGGTG
CCGTTGCTGT TTGGCATCAC GCTTTTGGTC ATCTGGGAAT GCGTGGTGCG CGGCTTCGAT
ATCCCCTCCA TTCTGCTGCC CGCCCCCAGC ATGATCTGGA CCCGGCTGAT CCATTCCCTG
CCCATCCTCT GGGCCGATTT CCAACAGACA TTTTTGAAAT CGGTGCTCAC GGGCTATGTC
GCAGGCTGTG GCCTTGGCTT TATCGTGGCC GTGCTGATTG ATCGCTCACC GTTTCTGAAA
CAAGGCCTGT TGCCGATTGG CAATTTCGTC TCGGCCCTGC CCGTGGTGGG CGTGGCCCCG
ATTATGGTGA TGTGGTTTGG GTTTGATTGG CCCTCAAAAG TCGCCGTCGT GGTGATCATG
ACCTTCTTCC CCATGCTGGT GAACACCGTG CAGGGACTAT CAGCCGCCAG CAATATGGAG
CGCGATTTGA TGCGCACCTA TGCCGCCAGC TGGTGGCAGA CGTTGATCAA GCTCCGGCTT
CCCGCCGCCT GGCCGTTTAT TTTCAACGCT CTGAAAATCA ATTCCACGCT GGCGCTGATT
GGGGCCATTG TGGCCGAGTT TTTTGGCACC CCCATCGTCG GCATGGGCTT TCGCATTTCC
ACCGAGGTTG GCCGCAGCAA TGTCGATATG GTCTGGGCCG AAATTGCGGT GGCGGCGCTG
GCGGGTTCGG TTTTCTATGG TTTGGTGGCG CTGGCTGAAA AGGTCGTCAC CTTCTGGCAT
CCGTCTGTCC GTGGTGGGCA GCGCTGA
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| Protein sequence | MSGYLLFALI FWLVAWGVNE WLVRQHFAAL PAQRAANIAV PLLFGITLLV IWECVVRGFD
IPSILLPAPS MIWTRLIHSL PILWADFQQT FLKSVLTGYV AGCGLGFIVA VLIDRSPFLK
QGLLPIGNFV SALPVVGVAP IMVMWFGFDW PSKVAVVVIM TFFPMLVNTV QGLSAASNME
RDLMRTYAAS WWQTLIKLRL PAAWPFIFNA LKINSTLALI GAIVAEFFGT PIVGMGFRIS
TEVGRSNVDM VWAEIAVAAL AGSVFYGLVA LAEKVVTFWH PSVRGGQR
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