Gene Caul_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1260 
Symbol 
ID5898715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1319182 
End bp1319940 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content74% 
IMG OID641561745 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001682888 
Protein GI167645225 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.21476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0147088 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGGC TCCTCGCCCC CCTCCTCCTC ATCGCCCTCC TCCTGGCCGC CTGGGAGTTG 
GCCTGCCGCG TCCTGGCCGT GCCGGTCTAC CTGCTGCCCG CTCCGTCGGC GATCGGCGCG
GCCCTGGCCG ACGGGTGGCC GCTGCTGCTG GCCAGCGCCT GGAACACCCT GTCGACCGCC
CTGGTCGGCC TGGCCCTGGC CAGCGCCCTG GCCTGCGGCC TGGCCTTGCT GGTCAGCCTC
AATCCCGTGA TCGAGGACGC CGTTCGCCCC GTGGCCGTGA CCCTGCAAGT GACGCCGCTG
GTGGCTATCG GGCCCTTGAT GACCATCTGG GCCGGCATCG AGCATCCGCA GCGGGCGGTC
GTCGCCCTGG CGGCCGTGGC GGCCTTCTTC CCGATCTTCT CGGGCGCCCT GACCGGCCTC
AAGGCCGTCG ACCCCGATCT TGGCCGCCTG TTCGACCTCT ATGGCGCGCG CCGCGTCCAG
CGCCTGTGGC GCCTGCGCCT GCCCTCGGCC GTGCCGGCCC TGCTGGAGGG CCACAAGGTG
GCGGCCGGCC TGGCGGTGGT CGGGGCGGTG GTCGCCGAAT TCGTGGCCGG CTCGGGCGGG
AACCAGGGCC TGGCCTGGCG GATTCTCGAG GCCTCCAACC GCCTGCAGAC CGCGCGGGTG
TTCGCCGCCC TGGCCGTTCT GGCCCTGCTG GGCGTCGCCC TTCATGCCGT GATGAGCCTG
GCCGAGCGCC GCCTGTTGGC CTGGTGGCGC GGTCGCTAG
 
Protein sequence
MMRLLAPLLL IALLLAAWEL ACRVLAVPVY LLPAPSAIGA ALADGWPLLL ASAWNTLSTA 
LVGLALASAL ACGLALLVSL NPVIEDAVRP VAVTLQVTPL VAIGPLMTIW AGIEHPQRAV
VALAAVAAFF PIFSGALTGL KAVDPDLGRL FDLYGARRVQ RLWRLRLPSA VPALLEGHKV
AAGLAVVGAV VAEFVAGSGG NQGLAWRILE ASNRLQTARV FAALAVLALL GVALHAVMSL
AERRLLAWWR GR