More than 300 homologs were found in PanDaTox collection
for query gene Rsph17025_1464 on replicon NC_009428
Organism: Rhodobacter sphaeroides ATCC 17025



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009428  Rsph17025_1464  binding-protein-dependent transport systems inner membrane component  100 
 
 
287 aa  558  1e-158  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_1814  binding-protein-dependent transport systems inner membrane component  88.5 
 
 
287 aa  481  1e-135  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0476587  normal  0.305557 
 
 
-
 
NC_007493  RSP_0181  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  88.5 
 
 
311 aa  479  1e-134  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.121482  n/a   
 
 
-
 
NC_009952  Dshi_1372  binding-protein-dependent transport systems inner membrane component  70.49 
 
 
305 aa  403  1e-111  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.856164  normal  0.860518 
 
 
-
 
NC_009636  Smed_2371  binding-protein-dependent transport systems inner membrane component  71.99 
 
 
294 aa  393  1e-108  Sinorhizobium medicae WSM419  Bacteria  normal  0.91742  normal  0.325627 
 
 
-
 
NC_011989  Avi_3459  ABC transporter  68.77 
 
 
288 aa  380  1e-104  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0345  binding-protein-dependent transport systems inner membrane component  67.02 
 
 
297 aa  372  1e-102  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_1495  binding-protein-dependent transport systems inner membrane component  67.55 
 
 
305 aa  361  8e-99  Ruegeria sp. TM1040  Bacteria  normal  0.473602  normal 
 
 
-
 
NC_008254  Meso_2045  binding-protein-dependent transport systems inner membrane component  67.73 
 
 
312 aa  354  1e-96  Chelativorans sp. BNC1  Bacteria  normal  0.613322  n/a   
 
 
-
 
NC_007802  Jann_2701  binding-protein-dependent transport systems inner membrane component  64.16 
 
 
315 aa  345  3e-94  Jannaschia sp. CCS1  Bacteria  normal  0.725502  normal  0.78823 
 
 
-
 
NC_011369  Rleg2_3041  binding-protein-dependent transport systems inner membrane component  56.71 
 
 
314 aa  337  1.9999999999999998e-91  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.819345  normal 
 
 
-
 
NC_012850  Rleg_3296  binding-protein-dependent transport systems inner membrane component  57.24 
 
 
309 aa  335  5e-91  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.913784  normal  0.0841796 
 
 
-
 
NC_010725  Mpop_1082  binding-protein-dependent transport systems inner membrane component  58.21 
 
 
305 aa  298  6e-80  Methylobacterium populi BJ001  Bacteria  normal  0.779888  normal  0.0329883 
 
 
-
 
NC_007643  Rru_A3454  binding-protein dependent transport system inner membrane protein  55.71 
 
 
298 aa  292  6e-78  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_1732  binding-protein-dependent transport systems inner membrane component  59.76 
 
 
302 aa  286  2.9999999999999996e-76  Methylobacterium extorquens PA1  Bacteria  normal  0.244285  normal 
 
 
-
 
NC_011757  Mchl_2051  binding-protein-dependent transport systems inner membrane component  60.16 
 
 
305 aa  284  1.0000000000000001e-75  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.418777 
 
 
-
 
NC_012880  Dd703_0036  binding-protein-dependent transport systems inner membrane component  47.69 
 
 
292 aa  274  1.0000000000000001e-72  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6032  putative ABC transporter, permease protein  56.4 
 
 
285 aa  253  3e-66  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2100  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
275 aa  188  7e-47  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1884  binding-protein-dependent transport systems inner membrane component  42.27 
 
 
307 aa  187  1e-46  Meiothermus ruber DSM 1279  Bacteria  normal  0.665089  normal  0.160596 
 
 
-
 
NC_013525  Tter_1221  binding-protein-dependent transport systems inner membrane component  35.78 
 
 
246 aa  127  2.0000000000000002e-28  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007802  Jann_3753  binding-protein-dependent transport systems inner membrane component  33.18 
 
 
268 aa  127  2.0000000000000002e-28  Jannaschia sp. CCS1  Bacteria  normal  0.333865  normal 
 
 
-
 
NC_012792  Vapar_6052  binding-protein-dependent transport systems inner membrane component  34.53 
 
 
274 aa  125  7e-28  Variovorax paradoxus S110  Bacteria  normal  0.0454164  n/a   
 
 
-
 
NC_013739  Cwoe_3810  binding-protein-dependent transport systems inner membrane component  32.59 
 
 
258 aa  124  2e-27  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.42897 
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  37.37 
 
 
273 aa  124  2e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4254  binding-protein-dependent transport systems inner membrane component  34.2 
 
 
283 aa  123  3e-27  Conexibacter woesei DSM 14684  Bacteria  normal  0.0441349  normal  0.902161 
 
 
-
 
NC_009921  Franean1_3131  binding-protein-dependent transport systems inner membrane component  35.25 
 
 
281 aa  123  3e-27  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_1169  putative ABC transporter permease protein  36.12 
 
 
279 aa  122  9.999999999999999e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0801  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  33.48 
 
 
298 aa  121  1.9999999999999998e-26  Burkholderia xenovorans LB400  Bacteria  normal  0.0745387  normal 
 
 
-
 
NC_012852  Rleg_6281  binding-protein-dependent transport systems inner membrane component  32.03 
 
 
256 aa  116  5e-25  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.783663  normal 
 
 
-
 
NC_009485  BBta_7629  putative ABC transporter permease protein  33.04 
 
 
282 aa  115  7.999999999999999e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.262472  normal  0.441686 
 
 
-
 
NC_010511  M446_0770  binding-protein-dependent transport systems inner membrane component  38.96 
 
 
273 aa  115  1.0000000000000001e-24  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_1668  binding-protein-dependent transport systems inner membrane component  33.91 
 
 
288 aa  114  2.0000000000000002e-24  Nakamurella multipartita DSM 44233  Bacteria  normal  0.173855  normal  0.365472 
 
 
-
 
NC_008786  Veis_0620  binding-protein-dependent transport systems inner membrane component  39.34 
 
 
254 aa  113  3e-24  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.63161  normal 
 
 
-
 
NC_012791  Vapar_1862  binding-protein-dependent transport systems inner membrane component  38.8 
 
 
257 aa  112  6e-24  Variovorax paradoxus S110  Bacteria  normal  0.116723  n/a   
 
 
-
 
NC_012850  Rleg_3934  binding-protein-dependent transport systems inner membrane component  33.93 
 
 
278 aa  112  7.000000000000001e-24  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.421742  normal 
 
 
-
 
NC_011369  Rleg2_3645  binding-protein-dependent transport systems inner membrane component  35.79 
 
 
268 aa  111  1.0000000000000001e-23  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4504  binding-protein-dependent transport systems inner membrane component  30.97 
 
 
281 aa  111  2.0000000000000002e-23  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_2703  binding-protein-dependent transport systems inner membrane component  28.4 
 
 
263 aa  110  3e-23  Marinomonas sp. MWYL1  Bacteria  normal  0.88688  normal 
 
 
-
 
NC_013521  Sked_02100  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  35.63 
 
 
308 aa  108  8.000000000000001e-23  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3112  binding-protein-dependent transport systems inner membrane component  35.24 
 
 
253 aa  107  2e-22  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0371548 
 
 
-
 
NC_013525  Tter_0403  binding-protein-dependent transport systems inner membrane component  34.87 
 
 
271 aa  107  2e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009253  Dred_3205  binding-protein-dependent transport systems inner membrane component  33.17 
 
 
265 aa  107  2e-22  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.000457845  n/a   
 
 
-
 
NC_013203  Apar_0391  binding-protein-dependent transport systems inner membrane component  30.8 
 
 
257 aa  106  4e-22  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1095  binding-protein-dependent transport systems inner membrane component  32.26 
 
 
264 aa  106  4e-22  Methylobacterium populi BJ001  Bacteria  normal  0.0240883  normal  0.166534 
 
 
-
 
NC_013521  Sked_24180  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  33.85 
 
 
302 aa  106  5e-22  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_2116  binding-protein-dependent transport systems inner membrane component  30.8 
 
 
253 aa  106  5e-22  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0614  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
250 aa  106  5e-22  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_2038  binding-protein-dependent transport systems inner membrane component  31.22 
 
 
264 aa  105  7e-22  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.697058  normal  0.743835 
 
 
-
 
NC_011831  Cagg_1308  binding-protein-dependent transport systems inner membrane component  33.14 
 
 
254 aa  105  9e-22  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.0000169849 
 
 
-
 
NC_010172  Mext_1719  binding-protein-dependent transport systems inner membrane component  31.22 
 
 
264 aa  105  1e-21  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2099  binding-protein-dependent transport systems inner membrane component  33.94 
 
 
306 aa  105  1e-21  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A0881  putative ABC transporter, permease protein  28.32 
 
 
251 aa  104  1e-21  Bacillus cereus AH187  Bacteria  hitchhiker  0.00328051  n/a   
 
 
-
 
NC_008786  Veis_3506  binding-protein-dependent transport systems inner membrane component  33.73 
 
 
282 aa  104  1e-21  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0528385  normal  0.0939424 
 
 
-
 
NC_009669  Oant_4580  binding-protein-dependent transport systems inner membrane component  34.63 
 
 
257 aa  104  1e-21  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0797  ABC transporter, permease protein, putative  29.05 
 
 
250 aa  104  2e-21  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_06840  ABC-type nitrate/sulfonate/bicarbonate transport system permease component  32.27 
 
 
266 aa  103  2e-21  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013223  Dret_2296  binding-protein-dependent transport systems inner membrane component  34.67 
 
 
250 aa  103  2e-21  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B4547  putative ABC transporter, permease protein  28.63 
 
 
251 aa  103  3e-21  Bacillus cereus G9842  Bacteria  normal  0.113137  normal  0.441246 
 
 
-
 
NC_011989  Avi_3552  ABC transporter membrane spanning protein  31.9 
 
 
285 aa  103  4e-21  Agrobacterium vitis S4  Bacteria  normal  0.0625026  n/a   
 
 
-
 
NC_013457  VEA_000865  hydroxymethylpyrimidine ABC transporter transmembrane component  32.26 
 
 
266 aa  102  5e-21  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_13670  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  30.8 
 
 
249 aa  102  6e-21  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0891  binding-protein-dependent transport systems inner membrane component  30.7 
 
 
268 aa  102  7e-21  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.223421 
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  33.17 
 
 
261 aa  102  1e-20  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_010184  BcerKBAB4_0643  binding-protein-dependent transport systems inner membrane component  29.05 
 
 
251 aa  101  2e-20  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2372  binding-protein-dependent transport systems inner membrane component  28.94 
 
 
289 aa  100  2e-20  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.239724 
 
 
-
 
NC_006274  BCZK0637  ABC transporter, permease  27.8 
 
 
250 aa  100  3e-20  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3871  binding-protein-dependent transport systems inner membrane component  31.44 
 
 
280 aa  100  3e-20  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.208081  n/a   
 
 
-
 
NC_005945  BAS0693  ABC transporter permease  27.8 
 
 
250 aa  100  4e-20  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0637  ABC transporter, permease  27.8 
 
 
250 aa  100  4e-20  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00537874  n/a   
 
 
-
 
NC_011773  BCAH820_0804  putative ABC transporter, permease protein  27.8 
 
 
250 aa  100  4e-20  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.22036e-46 
 
 
-
 
NC_007530  GBAA_0727  ABC transporter permease  27.8 
 
 
250 aa  100  4e-20  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0363276  n/a   
 
 
-
 
NC_011725  BCB4264_A0784  putative ABC transporter, permease protein  31.94 
 
 
250 aa  99.8  5e-20  Bacillus cereus B4264  Bacteria  normal  0.605831  n/a   
 
 
-
 
NC_010623  Bphy_3181  binding-protein-dependent transport systems inner membrane component  32.76 
 
 
277 aa  99  8e-20  Burkholderia phymatum STM815  Bacteria  normal  0.0283642  normal 
 
 
-
 
NC_007778  RPB_3118  binding-protein dependent transport system inner membrane protein  29.17 
 
 
284 aa  98.6  9e-20  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1393  binding-protein-dependent transport systems inner membrane component  31.91 
 
 
254 aa  98.2  1e-19  Meiothermus ruber DSM 1279  Bacteria  normal  0.302994  normal  0.157809 
 
 
-
 
NC_009485  BBta_1263  ABC transporter permease  31.63 
 
 
262 aa  98.6  1e-19  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.165267 
 
 
-
 
NC_009921  Franean1_5688  binding-protein-dependent transport systems inner membrane component  31.25 
 
 
284 aa  97.4  2e-19  Frankia sp. EAN1pec  Bacteria  normal  0.748678  normal 
 
 
-
 
NC_009667  Oant_0344  binding-protein-dependent transport systems inner membrane component  29.66 
 
 
286 aa  97.1  3e-19  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.113814  n/a   
 
 
-
 
NC_011988  Avi_5406  ABC transporter membrane spanning protein  27.46 
 
 
251 aa  97.1  3e-19  Agrobacterium vitis S4  Bacteria  normal  0.408693  n/a   
 
 
-
 
NC_013946  Mrub_1883  binding-protein-dependent transport systems inner membrane component  34.08 
 
 
322 aa  97.1  3e-19  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.167871 
 
 
-
 
NC_012848  Rleg_4665  binding-protein-dependent transport systems inner membrane component  30.87 
 
 
284 aa  97.1  3e-19  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.65192 
 
 
-
 
NC_011989  Avi_3460  ABC transporter membrane spanning protein  31.75 
 
 
288 aa  97.4  3e-19  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_2762  binding-protein-dependent transport systems inner membrane component  29.57 
 
 
250 aa  96.7  4e-19  Conexibacter woesei DSM 14684  Bacteria  normal  0.0247808  normal  0.0244453 
 
 
-
 
NC_013093  Amir_2627  binding-protein-dependent transport systems inner membrane component  31.9 
 
 
288 aa  96.7  4e-19  Actinosynnema mirum DSM 43827  Bacteria  normal  0.752734  n/a   
 
 
-
 
NC_008254  Meso_2046  binding-protein-dependent transport systems inner membrane component  31.22 
 
 
286 aa  96.3  5e-19  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_0620  binding-protein-dependent transport systems inner membrane component  33.68 
 
 
258 aa  96.3  5e-19  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_3035  binding-protein-dependent transport systems inner membrane component  31.25 
 
 
256 aa  95.9  6e-19  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1676  binding-protein-dependent transport systems inner membrane component  30.43 
 
 
287 aa  95.9  8e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00381914  normal 
 
 
-
 
NC_012880  Dd703_0037  binding-protein-dependent transport systems inner membrane component  29.52 
 
 
362 aa  95.5  9e-19  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_3116  binding-protein-dependent transport systems inner membrane component  35.05 
 
 
272 aa  95.5  9e-19  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.025765  normal 
 
 
-
 
NC_007802  Jann_1473  binding-protein-dependent transport systems inner membrane component  33.17 
 
 
283 aa  95.1  1e-18  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_2545  binding-protein-dependent transport system protein  29.77 
 
 
287 aa  94  2e-18  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.240068  normal  0.521676 
 
 
-
 
NC_009767  Rcas_2389  binding-protein-dependent transport systems inner membrane component  33.7 
 
 
275 aa  94  2e-18  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_2064  binding-protein-dependent transport systems inner membrane component  30 
 
 
254 aa  94  3e-18  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.00112586  n/a   
 
 
-
 
NC_008148  Rxyl_3036  binding-protein-dependent transport systems inner membrane component  29.26 
 
 
266 aa  94  3e-18  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3419  binding-protein-dependent transport systems inner membrane component  36.13 
 
 
258 aa  94  3e-18  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.121812  n/a   
 
 
-
 
NC_008044  TM1040_1494  binding-protein-dependent transport systems inner membrane component  30.08 
 
 
281 aa  93.2  4e-18  Ruegeria sp. TM1040  Bacteria  normal  0.58323  normal 
 
 
-
 
NC_008686  Pden_0033  binding-protein-dependent transport systems inner membrane component  29.39 
 
 
243 aa  93.2  5e-18  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2576  binding-protein-dependent transport systems inner membrane component  36.9 
 
 
306 aa  92.8  6e-18  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
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