| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5134 |
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| Symbol | |
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| ID | 7971505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5448248 |
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| End bp | 5449132 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644795728 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002947002 |
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| Protein GI | 239818092 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTCGA CATCGATCAC TGATGAACCC GCCGCGCTCG CGGACGCGGA CACGGCGCCC
TCCGAGGCCG CGCTGCGCGC GCATGAAGAC GGCTTGCGCC GGCGCGAGTC GATGCTGCGC
ATCGCGGTGC CCGCGGGCAT CGTCATTGCG CTGCTGCTGG CCTGGGAATG GATGGTGCGC
GCCAACAACA TCCCGCACTA CATCCTGCCC GCGCCTTCGC TCATTCTTCG CACGCTGTTC
GACAACTGGG GCTCGCTCTC CAGCGCGCTG TGGTTCACGG TGAAGCTCAC GCTGCTCGCG
CTCGGCGCGG CCATCGTGGG CGGCGTGCTG CTGGCCATTG CCTTCGCGCT CTTCAAGTGG
GTGGAGATCG GCCTGTTCCC GATCGCCGTG ATCCTGCAGG TGACGCCGAT CATCGCGATC
GCGCCGCTCA TATTGATCTA CGTGTCGAGC ACCACCGCGG CGCTCCTGCT GTGCGCGTGG
ATCGTGGCCT TCTTCCCGAT CCTGTCGAAC ACCGTCATCG GCCTGAAAAG CGCCGACAGC
AACCTGCGCG ACCTGTTCCA GCTCTACAAG GCCTCGCCGT GGCAGACCTT CCGCTACCTG
CTCGCGCCGA GCGCGCTGCC CTACTTCATG GCGGGCCTGA AGATCGCGGG CGGCCTGAGC
CTGATCGGCG CGGTGGTGGC CGAGTTCACG GCCGGCACCG CGGGCAAGGA AACGGGCCTG
GCCTCGCGCA TCCTCGAATC GAGCTTCCGC ACCGAGATCC CGATGATGTT CGCGGCGCTG
CTGCTGGTGT CCCTGCTCGG CATCGTGATC TTCATCGTGT TCGCGGCACT GTCGCGTCTC
GTGCTCGGCC ACTGGCATGA AAGCGAGATG CGCCGTGAAC GCTAG
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| Protein sequence | MASTSITDEP AALADADTAP SEAALRAHED GLRRRESMLR IAVPAGIVIA LLLAWEWMVR
ANNIPHYILP APSLILRTLF DNWGSLSSAL WFTVKLTLLA LGAAIVGGVL LAIAFALFKW
VEIGLFPIAV ILQVTPIIAI APLILIYVSS TTAALLLCAW IVAFFPILSN TVIGLKSADS
NLRDLFQLYK ASPWQTFRYL LAPSALPYFM AGLKIAGGLS LIGAVVAEFT AGTAGKETGL
ASRILESSFR TEIPMMFAAL LLVSLLGIVI FIVFAALSRL VLGHWHESEM RRER
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