More than 300 homologs were found in PanDaTox collection
for query gene SO_1723 on replicon NC_004347
Organism: Shewanella oneidensis MR-1



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009997  Sbal195_1566  binding-protein-dependent transport systems inner membrane component  86.18 
 
 
752 aa  1265    Shewanella baltica OS195  Bacteria  normal  0.637323  normal  0.18855 
 
 
-
 
NC_009438  Sputcn32_1434  binding-protein-dependent transport systems inner membrane component  88.89 
 
 
752 aa  1308    Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_0180  binding-protein-dependent transport systems inner membrane component  50.54 
 
 
761 aa  664    Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_3642  phosphate ABC transporter, permease protein  48.2 
 
 
778 aa  693    Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1723  phosphate ABC transporter, permease protein, putative  100 
 
 
738 aa  1503    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_1698  binding-protein-dependent transport systems inner membrane component  73.17 
 
 
752 aa  1109    Shewanella loihica PV-4  Bacteria  normal  normal  0.719566 
 
 
-
 
NC_009665  Shew185_1533  binding-protein-dependent transport systems inner membrane component  86.31 
 
 
752 aa  1269    Shewanella baltica OS185  Bacteria  normal  0.0241057  n/a   
 
 
-
 
NC_012560  Avin_48590  Phosphate ABC-transporter, permease protein PstC  48.71 
 
 
762 aa  637    Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_5236  binding-protein-dependent transport systems inner membrane component  49.39 
 
 
762 aa  656    Pseudomonas putida F1  Bacteria  normal  0.644471  normal  0.245739 
 
 
-
 
NC_007005  Psyr_5040  binding-protein dependent transport system inner membrane protein  49.39 
 
 
753 aa  665    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.921779 
 
 
-
 
NC_009656  PSPA7_6147  membrane protein component of ABC phosphate transporter  48.23 
 
 
761 aa  642    Pseudomonas aeruginosa PA7  Bacteria  normal  0.297705  n/a   
 
 
-
 
NC_007484  Noc_2398  ABC transporter, inner membrane subunit  48.37 
 
 
761 aa  671    Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.220176  n/a   
 
 
-
 
NC_007492  Pfl01_5614  binding-protein dependent transport system inner membrane protein  49.8 
 
 
760 aa  664    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.536938  normal  0.133836 
 
 
-
 
NC_011663  Sbal223_2818  binding-protein-dependent transport systems inner membrane component  86.18 
 
 
752 aa  1268    Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_4416  binding-protein-dependent transport systems inner membrane component  50 
 
 
755 aa  699    Marinomonas sp. MWYL1  Bacteria  normal  0.383824  normal 
 
 
-
 
NC_007954  Sden_2584  binding-protein-dependent transport systems inner membrane component  73.58 
 
 
751 aa  1097    Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3168  binding-protein-dependent transport systems inner membrane component  74.25 
 
 
752 aa  1053    Shewanella woodyi ATCC 51908  Bacteria  normal  0.618473  normal 
 
 
-
 
NC_009901  Spea_2745  binding-protein-dependent transport systems inner membrane component  74.12 
 
 
751 aa  1100    Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_2560  binding-protein-dependent transport systems inner membrane component  94.44 
 
 
752 aa  1360    Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2627  binding-protein-dependent transport systems inner membrane component  94.44 
 
 
752 aa  1361    Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1357  binding-protein-dependent transport systems inner membrane component  76.29 
 
 
751 aa  1150    Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1501  binding-protein-dependent transport systems inner membrane component  73.98 
 
 
752 aa  1041    Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000210465  normal 
 
 
-
 
NC_008577  Shewana3_2734  binding-protein-dependent transport systems inner membrane component  94.31 
 
 
752 aa  1396    Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_5375  binding-protein-dependent transport systems inner membrane component  49.19 
 
 
762 aa  652    Pseudomonas putida GB-1  Bacteria  normal  normal  0.690335 
 
 
-
 
NC_008700  Sama_1408  phosphate ABC transporter, permease protein, putative  73.58 
 
 
751 aa  1085    Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0601702 
 
 
-
 
NC_009052  Sbal_1538  binding-protein-dependent transport systems inner membrane component  86.31 
 
 
752 aa  1269    Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_0146  binding-protein-dependent transport systems inner membrane component  49.19 
 
 
762 aa  654    Pseudomonas putida W619  Bacteria  normal  0.212947  normal 
 
 
-
 
NC_004578  PSPTO_5486  phosphate ABC transporter, permease protein, putative  50.67 
 
 
677 aa  625  1e-177  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_5328  binding-protein-dependent transport systems inner membrane component  50.22 
 
 
669 aa  616  1e-175  Pseudomonas putida KT2440  Bacteria  normal  0.662544  hitchhiker  0.00483454 
 
 
-
 
NC_013889  TK90_0956  binding-protein-dependent transport systems inner membrane component  44.56 
 
 
756 aa  605  9.999999999999999e-173  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.137711  normal  0.159136 
 
 
-
 
NC_008463  PA14_70850  membrane protein component of ABC phosphate transporter  48.97 
 
 
677 aa  607  9.999999999999999e-173  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.721295 
 
 
-
 
NC_007520  Tcr_0537  binding-protein dependent transport system inner membrane protein  44.2 
 
 
755 aa  602  1.0000000000000001e-171  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I2454  phosphate import protein, transmembrane component PstC  44.8 
 
 
735 aa  586  1e-166  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.530002  n/a   
 
 
-
 
NC_013456  VEA_004380  phosphate transport system permease protein PstC  44.49 
 
 
734 aa  579  1e-164  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01031  hypothetical protein  45.11 
 
 
734 aa  581  1e-164  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008789  Hhal_0095  binding-protein-dependent transport systems inner membrane component  43.59 
 
 
775 aa  570  1e-161  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1135  binding-protein-dependent transport systems inner membrane component  43.4 
 
 
771 aa  556  1e-157  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.975413 
 
 
-
 
NC_009457  VC0395_A0258  phosphate ABC transporter, permease protein  45.76 
 
 
731 aa  548  1e-154  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2652  binding-protein-dependent transport systems inner membrane component  43.12 
 
 
765 aa  521  1e-146  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1228  phosphate ABC transporter, permease protein PstC  42.69 
 
 
743 aa  518  1.0000000000000001e-145  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1345  binding-protein-dependent transport systems inner membrane component  42.66 
 
 
719 aa  502  1e-141  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3540  binding-protein-dependent transport systems inner membrane component  41.18 
 
 
724 aa  502  1e-140  Serratia proteamaculans 568  Bacteria  normal  0.875094  normal 
 
 
-
 
NC_013421  Pecwa_1334  binding-protein-dependent transport systems inner membrane component  41.55 
 
 
722 aa  492  1e-137  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2944  binding-protein-dependent transport systems inner membrane component  40.62 
 
 
722 aa  484  1e-135  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2671  binding-protein-dependent transport systems inner membrane component  39.31 
 
 
718 aa  451  1e-125  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1237  binding-protein-dependent transport systems inner membrane component  39.17 
 
 
743 aa  443  1e-123  Dickeya zeae Ech1591  Bacteria  normal  0.0916528  n/a   
 
 
-
 
NC_008609  Ppro_3158  binding-protein-dependent transport systems inner membrane component  36.6 
 
 
742 aa  436  1e-121  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0619  binding-protein-dependent transport systems inner membrane component  47.08 
 
 
641 aa  433  1e-120  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010655  Amuc_1305  binding-protein-dependent transport systems inner membrane component  36.46 
 
 
784 aa  424  1e-117  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal  0.462831 
 
 
-
 
NC_007498  Pcar_0656  ABC-type phosphate transport system, permease component  37.69 
 
 
742 aa  419  1e-116  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.770286  n/a   
 
 
-
 
NC_007963  Csal_3267  binding-protein-dependent transport systems inner membrane component  35.33 
 
 
706 aa  365  2e-99  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03151  putative phosphate ABC transporter, permease protein  35.05 
 
 
727 aa  295  2e-78  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_4121  phosphate ABC transporter, inner membrane subunit PstC  39.21 
 
 
336 aa  158  4e-37  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4147  phosphate ABC transporter, inner membrane subunit PstC  39.21 
 
 
336 aa  158  4e-37  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_4005  phosphate ABC transporter inner membrane protein  39.47 
 
 
336 aa  157  7e-37  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.475796  n/a   
 
 
-
 
NC_009675  Anae109_0419  phosphate ABC transporter, inner membrane subunit PstC  38.33 
 
 
325 aa  154  5.9999999999999996e-36  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.730812 
 
 
-
 
NC_011899  Hore_21615  phosphate ABC transporter, permease protein PstA  39.62 
 
 
318 aa  149  2.0000000000000003e-34  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_0751  phosphate ABC transporter inner membrane protein  50.34 
 
 
297 aa  141  4.999999999999999e-32  Methanococcoides burtonii DSM 6242  Archaea  normal  0.0108561  n/a   
 
 
-
 
NC_007512  Plut_1244  phosphate ABC transporter permease  35.13 
 
 
387 aa  140  7.999999999999999e-32  Chlorobium luteolum DSM 273  Bacteria  normal  0.81986  normal  0.80225 
 
 
-
 
NC_010831  Cphamn1_1234  phosphate ABC transporter, inner membrane subunit PstC  32.93 
 
 
387 aa  138  3.0000000000000003e-31  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal  0.352319 
 
 
-
 
NC_010803  Clim_1619  phosphate ABC transporter, inner membrane subunit PstC  33.13 
 
 
388 aa  138  3.0000000000000003e-31  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_1061  phosphate ABC transporter permease  31.86 
 
 
298 aa  138  4e-31  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_4079  phosphate ABC transporter, inner membrane subunit PstC  29.17 
 
 
357 aa  138  4e-31  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_2546  phosphate ABC transporter, inner membrane subunit PstC  31.31 
 
 
535 aa  137  7.000000000000001e-31  Opitutus terrae PB90-1  Bacteria  normal  normal  0.153415 
 
 
-
 
NC_011060  Ppha_1681  phosphate ABC transporter, inner membrane subunit PstC  32.62 
 
 
387 aa  135  3e-30  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.091837  n/a   
 
 
-
 
NC_011059  Paes_0944  phosphate ABC transporter, inner membrane subunit PstC  32.92 
 
 
387 aa  133  1.0000000000000001e-29  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal  0.502812 
 
 
-
 
NC_009051  Memar_2277  phosphate ABC transporter, inner membrane subunit PstC  46.06 
 
 
646 aa  132  2.0000000000000002e-29  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A1779  phosphate ABC transporter, permease protein  46.36 
 
 
296 aa  132  3e-29  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_011899  Hore_21570  phosphate ABC transporter, inner membrane subunit PstC  44.52 
 
 
291 aa  132  3e-29  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0764  phosphate ABC transporter, inner membrane subunit PstC  44.81 
 
 
297 aa  131  4.0000000000000003e-29  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.316 
 
 
-
 
NC_008554  Sfum_2887  phosphate ABC transporter, inner membrane subunit PstC  34.53 
 
 
297 aa  130  8.000000000000001e-29  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.110489 
 
 
-
 
NC_008639  Cpha266_1039  phosphate ABC transporter, inner membrane subunit PstC  31.12 
 
 
387 aa  130  1.0000000000000001e-28  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.0327987  n/a   
 
 
-
 
NC_013202  Hmuk_0356  phosphate ABC transporter, inner membrane subunit PstC  28.99 
 
 
350 aa  128  5e-28  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.0241985  normal  0.511021 
 
 
-
 
NC_011883  Ddes_0565  phosphate ABC transporter, inner membrane subunit PstC  44 
 
 
296 aa  127  5e-28  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.0134721  n/a   
 
 
-
 
NC_011832  Mpal_0481  phosphate ABC transporter, inner membrane subunit PstC  44.24 
 
 
645 aa  127  6e-28  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_009634  Mevan_0421  phosphate ABC transporter, inner membrane subunit PstC  45.07 
 
 
290 aa  127  9e-28  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_007796  Mhun_2982  phosphate ABC transporter permease  48.25 
 
 
649 aa  122  3e-26  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_009943  Dole_1926  phosphate ABC transporter, inner membrane subunit PstC  44.6 
 
 
309 aa  122  3e-26  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0478834  n/a   
 
 
-
 
NC_009635  Maeo_0570  phosphate ABC transporter, inner membrane subunit PstC  41.78 
 
 
292 aa  120  9.999999999999999e-26  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_008554  Sfum_0704  phosphate ABC transporter, inner membrane subunit PstC  45.07 
 
 
303 aa  120  9.999999999999999e-26  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_2105  phosphate ABC transporter, inner membrane subunit PstC  40.79 
 
 
283 aa  119  1.9999999999999998e-25  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1162  phosphate ABC transporter, inner membrane subunit PstC  44.29 
 
 
284 aa  119  1.9999999999999998e-25  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_1918  phosphate ABC transporter, inner membrane subunit PstA  45.45 
 
 
604 aa  119  1.9999999999999998e-25  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.396887  normal 
 
 
-
 
NC_009637  MmarC7_0348  phosphate ABC transporter, inner membrane subunit PstC  39.04 
 
 
291 aa  116  1.0000000000000001e-24  Methanococcus maripaludis C7  Archaea  normal  hitchhiker  0.0000428257 
 
 
-
 
NC_009636  Smed_0120  phosphate ABC transporter, inner membrane subunit PstC  32.14 
 
 
494 aa  117  1.0000000000000001e-24  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.268456 
 
 
-
 
NC_009135  MmarC5_0488  phosphate ABC transporter, inner membrane subunit PstC  39.04 
 
 
291 aa  116  2.0000000000000002e-24  Methanococcus maripaludis C5  Archaea  normal  0.456942  n/a   
 
 
-
 
NC_009975  MmarC6_1571  phosphate ABC transporter, inner membrane subunit PstC  39.73 
 
 
291 aa  116  2.0000000000000002e-24  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_010001  Cphy_1668  phosphate ABC transporter, inner membrane subunit PstC  33.94 
 
 
281 aa  115  3e-24  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.000000035104  n/a   
 
 
-
 
NC_002939  GSU1098  phosphate ABC transporter, permease protein  31.6 
 
 
325 aa  114  6e-24  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008553  Mthe_0705  phosphate ABC transporter, inner membrane subunit PstC  41.46 
 
 
301 aa  114  6e-24  Methanosaeta thermophila PT  Archaea  normal  0.0779351  n/a   
 
 
-
 
NC_013922  Nmag_2359  phosphate ABC transporter, inner membrane subunit PstC  26.89 
 
 
358 aa  113  2.0000000000000002e-23  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_010718  Nther_0980  phosphate ABC transporter, inner membrane subunit PstC  45.32 
 
 
303 aa  112  3e-23  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.120988 
 
 
-
 
NC_008942  Mlab_1117  hypothetical protein  44.63 
 
 
627 aa  110  1e-22  Methanocorpusculum labreanum Z  Archaea  normal  normal 
 
 
-
 
NC_007614  Nmul_A1086  phosphate ABC transporter permease  41.5 
 
 
310 aa  108  3e-22  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1094  phosphate ABC transporter, inner membrane subunit PstC  37.43 
 
 
284 aa  108  5e-22  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_1959  phosphate ABC transporter, inner membrane subunit PstC  45.08 
 
 
290 aa  106  1e-21  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_4409  phosphate ABC transporter, inner membrane subunit PstC  42.47 
 
 
296 aa  106  2e-21  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0464334  normal 
 
 
-
 
NC_007514  Cag_0500  phosphate ABC transporter permease  33.04 
 
 
414 aa  106  2e-21  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_3120  phosphate ABC transporter, inner membrane subunit PstC  31.72 
 
 
456 aa  106  2e-21  Chelativorans sp. BNC1  Bacteria  normal  0.43315  n/a   
 
 
-
 
NC_009720  Xaut_3955  phosphate ABC transporter, inner membrane subunit PstC  32.47 
 
 
315 aa  105  3e-21  Xanthobacter autotrophicus Py2  Bacteria  normal  0.189058  normal  0.412166 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>