Gene Avin_48590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_48590 
SymbolpstC 
ID7763718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4920929 
End bp4923217 
Gene Length2289 bp 
Protein Length762 aa 
Translation table11 
GC content67% 
IMG OID643807700 
ProductPhosphate ABC-transporter, permease protein PstC 
Protein accessionYP_002801935 
Protein GI226946862 
COG category[R] General function prediction only 
COG ID[COG4590] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACA TGGCCAAAGA CTTCCCCACC GCTGCGCCCC AGACGCCGCG CCTGGACTTC 
AACACGCCCG CTCTGCAGCG CAGGCGCCGG CGACGCGCCT TCGAGGACCG CCTGGCGCGC
TGGTACGTCA GCATCGGCGG ACTGGCGGTG CTGGGCGCCA TCACCCTGAT ATTCTTCTAT
CTGGCCCAGG TGGTCCTGCC GATGTTCCAG GGCGCCGAGC TGAACGTGCA TGGCGAGCCG
CAGCGGCCGG CCTGGCTGGC CGATCAGGGC GAGGCCCTGC TGCTGGCGGT CGAGGAGCAG
AACCAGGTCG CCATGCGTCT GGATACCCAT GGCCAGGTAC GGTTCTTCGA GGCCAACGGC
GAGAAGAGGC TGCTCGGCCA GGCCGCCCTG CCGATTCCCG AGGGGGCCGA GATCCTTTCC
CTGGGGCGCG ACCAGCCGGG CAGCAACCGC CTGGTGCTGG GCCTCTCCAA CGGCCAGGCG
CTGGTGGTCG GCCATAGCTA CCGGGTCACC TATCCGGACA ACCGCAAGAC CATCACGCCG
AGCATCGACT ATCCCTACGG CGAGGCGCCG ATCCAGCTCG ATCCGCAGGG CCGTCCGCTG
CAAGAAGTGG CGATGAACGT CGGCAACGAC GGGCTGCTCC TGGCCGGCTC GACGGGCAAT
CAGGTACTGG CGCTGGAACT GAGCCGCGAA GAGAACCTCC TGAGCGGCGA GACCACCCTG
AGCGAGCGAC GCCTCGAATT GCCGCAACTC GCCGAACCGG TCAAGGCGCT GCTGATCGAT
CCGCGCCAGT TGTGGCTGTA CGTGATCAAC GGGCGTTCCA CAGCCGACGT GTTCGACCTG
CGCCAGCAGA CGCTGAACGG CCGCTACAAG CTGCTCGCCG ATCCCCAGGC GGAGGTGACC
GAGGTGGCGG CCCTGCTCGG TGGCATCTCG CTGATGATCG GCGACTCCAC GGGCGGCATC
CAGCAGTGGT TCATGGCGCG TGGCGAAGCC GGTCCCGAAC TGAAGAACAT CCGCGGCTTC
CAGTTGAACG GCAGTCCCAT CGTCCAGATC CTCCCGGAGG AGCGCCGCAA GGGCTTCATC
GCCCTGGACG CCGCCGGTAA TCTGGGCGTG TTCCACAGCA CCGCGCATCG CACCCTGCTC
ATCGAGCCGG TCGCCGGCGC CGCCGCGCAG GCCGCCCTGT CGCCGCGTGC CGACCGGCTG
CTGGTCGAGT CCGCAGGCCG GCTGCAGGGC TTCGAGCTGG ACAACCCGCA TCCGGAGATT
TCCTGGAGCG CGCTGTGGAG CAAGGTGTGG TACGAGAGCT ACGACGAGCC CAAGTACATC
TGGCAGTCGA CTTCCGCCAA CTCCGACTTC GAGCCCAAGC TGAGCCTCTC GCCGCTTACC
TTCGGCACCC TCAAGGCGGC CTTCTACGCC ATGCTGCTGG CCGCGCCCAT GGCCATCTGC
GCGGCCATCT ACACTGCCTA CTTCATGGCC CCGGCGATGC GTTCCAAGGT CAAGCCGGTG
ATCGAGCTGA TGGAGGCGCT GCCCACGGTG ATCCTCGGCT TCTTCGCCGG CCTGTTCCTT
GCGCCCTACG TGGAAGCCCA CCTGCCGGGT ATCTTCAGTC TGCTGCTGTT GACCCCGCTG
GGCATCCTCG CCGCAGCCTA CGGCTGGAGC CGCCTGCCGG AGAGCATCCG CCTGCGCGTA
CCGGATGGCT GGGAGGCGGC TCTGCTGATC CCGGTGATCC TCGCCGTCGG CGCCCTGGCC
CTGGGCATGA GCGGCCATCT GGAAAACTGG TTCTTCGGCG GCGACATGCG CCTGTGGCTG
TCCAATGACC TGGGCATCCC GTTCGACCAG CGCAACGCTC TGGTGGTCGG CCTGGCGATG
GGCTTCGCGG TGATCCCGAA CATCTACTCG ATCGCCGAGG ACGCCGTGTT CAGCGTGCCC
AAGAGCCTGA CCCTGGGCTC CCTGGCCCTG GGCGCCACGC CCTGGCAGAC CCTGACCCGG
GTGGTCATCC TCACCGCCAG TCCGGGCATC TTCTCGGCGC TGATGATCGG CCTGGGGCGC
GCCGTCGGCG AAACCATGAT CGTGCTGATG GCCACCGGCA ACACGCCGAT CATGGACATC
AACATCTTCG AAGGCCTGCG TACCCTGGCG GCCAACGTCG CGGTGGAGAT GCCCGAGTCG
GAAGTCGGCA GCAGCCACTA TCGCGTGCTG TTTCTCGCCG CGCTGGTGCT GCTCAGCTTC
ACCTTCATCA TGAACACCGC GGCCGAGATG ATCCGTACCC GCCTGCGCAA GAAATATGCG
TCGCTCTGA
 
Protein sequence
MTDMAKDFPT AAPQTPRLDF NTPALQRRRR RRAFEDRLAR WYVSIGGLAV LGAITLIFFY 
LAQVVLPMFQ GAELNVHGEP QRPAWLADQG EALLLAVEEQ NQVAMRLDTH GQVRFFEANG
EKRLLGQAAL PIPEGAEILS LGRDQPGSNR LVLGLSNGQA LVVGHSYRVT YPDNRKTITP
SIDYPYGEAP IQLDPQGRPL QEVAMNVGND GLLLAGSTGN QVLALELSRE ENLLSGETTL
SERRLELPQL AEPVKALLID PRQLWLYVIN GRSTADVFDL RQQTLNGRYK LLADPQAEVT
EVAALLGGIS LMIGDSTGGI QQWFMARGEA GPELKNIRGF QLNGSPIVQI LPEERRKGFI
ALDAAGNLGV FHSTAHRTLL IEPVAGAAAQ AALSPRADRL LVESAGRLQG FELDNPHPEI
SWSALWSKVW YESYDEPKYI WQSTSANSDF EPKLSLSPLT FGTLKAAFYA MLLAAPMAIC
AAIYTAYFMA PAMRSKVKPV IELMEALPTV ILGFFAGLFL APYVEAHLPG IFSLLLLTPL
GILAAAYGWS RLPESIRLRV PDGWEAALLI PVILAVGALA LGMSGHLENW FFGGDMRLWL
SNDLGIPFDQ RNALVVGLAM GFAVIPNIYS IAEDAVFSVP KSLTLGSLAL GATPWQTLTR
VVILTASPGI FSALMIGLGR AVGETMIVLM ATGNTPIMDI NIFEGLRTLA ANVAVEMPES
EVGSSHYRVL FLAALVLLSF TFIMNTAAEM IRTRLRKKYA SL