Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_48590 |
Symbol | pstC |
ID | 7763718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 4920929 |
End bp | 4923217 |
Gene Length | 2289 bp |
Protein Length | 762 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643807700 |
Product | Phosphate ABC-transporter, permease protein PstC |
Protein accession | YP_002801935 |
Protein GI | 226946862 |
COG category | [R] General function prediction only |
COG ID | [COG4590] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGACA TGGCCAAAGA CTTCCCCACC GCTGCGCCCC AGACGCCGCG CCTGGACTTC AACACGCCCG CTCTGCAGCG CAGGCGCCGG CGACGCGCCT TCGAGGACCG CCTGGCGCGC TGGTACGTCA GCATCGGCGG ACTGGCGGTG CTGGGCGCCA TCACCCTGAT ATTCTTCTAT CTGGCCCAGG TGGTCCTGCC GATGTTCCAG GGCGCCGAGC TGAACGTGCA TGGCGAGCCG CAGCGGCCGG CCTGGCTGGC CGATCAGGGC GAGGCCCTGC TGCTGGCGGT CGAGGAGCAG AACCAGGTCG CCATGCGTCT GGATACCCAT GGCCAGGTAC GGTTCTTCGA GGCCAACGGC GAGAAGAGGC TGCTCGGCCA GGCCGCCCTG CCGATTCCCG AGGGGGCCGA GATCCTTTCC CTGGGGCGCG ACCAGCCGGG CAGCAACCGC CTGGTGCTGG GCCTCTCCAA CGGCCAGGCG CTGGTGGTCG GCCATAGCTA CCGGGTCACC TATCCGGACA ACCGCAAGAC CATCACGCCG AGCATCGACT ATCCCTACGG CGAGGCGCCG ATCCAGCTCG ATCCGCAGGG CCGTCCGCTG CAAGAAGTGG CGATGAACGT CGGCAACGAC GGGCTGCTCC TGGCCGGCTC GACGGGCAAT CAGGTACTGG CGCTGGAACT GAGCCGCGAA GAGAACCTCC TGAGCGGCGA GACCACCCTG AGCGAGCGAC GCCTCGAATT GCCGCAACTC GCCGAACCGG TCAAGGCGCT GCTGATCGAT CCGCGCCAGT TGTGGCTGTA CGTGATCAAC GGGCGTTCCA CAGCCGACGT GTTCGACCTG CGCCAGCAGA CGCTGAACGG CCGCTACAAG CTGCTCGCCG ATCCCCAGGC GGAGGTGACC GAGGTGGCGG CCCTGCTCGG TGGCATCTCG CTGATGATCG GCGACTCCAC GGGCGGCATC CAGCAGTGGT TCATGGCGCG TGGCGAAGCC GGTCCCGAAC TGAAGAACAT CCGCGGCTTC CAGTTGAACG GCAGTCCCAT CGTCCAGATC CTCCCGGAGG AGCGCCGCAA GGGCTTCATC GCCCTGGACG CCGCCGGTAA TCTGGGCGTG TTCCACAGCA CCGCGCATCG CACCCTGCTC ATCGAGCCGG TCGCCGGCGC CGCCGCGCAG GCCGCCCTGT CGCCGCGTGC CGACCGGCTG CTGGTCGAGT CCGCAGGCCG GCTGCAGGGC TTCGAGCTGG ACAACCCGCA TCCGGAGATT TCCTGGAGCG CGCTGTGGAG CAAGGTGTGG TACGAGAGCT ACGACGAGCC CAAGTACATC TGGCAGTCGA CTTCCGCCAA CTCCGACTTC GAGCCCAAGC TGAGCCTCTC GCCGCTTACC TTCGGCACCC TCAAGGCGGC CTTCTACGCC ATGCTGCTGG CCGCGCCCAT GGCCATCTGC GCGGCCATCT ACACTGCCTA CTTCATGGCC CCGGCGATGC GTTCCAAGGT CAAGCCGGTG ATCGAGCTGA TGGAGGCGCT GCCCACGGTG ATCCTCGGCT TCTTCGCCGG CCTGTTCCTT GCGCCCTACG TGGAAGCCCA CCTGCCGGGT ATCTTCAGTC TGCTGCTGTT GACCCCGCTG GGCATCCTCG CCGCAGCCTA CGGCTGGAGC CGCCTGCCGG AGAGCATCCG CCTGCGCGTA CCGGATGGCT GGGAGGCGGC TCTGCTGATC CCGGTGATCC TCGCCGTCGG CGCCCTGGCC CTGGGCATGA GCGGCCATCT GGAAAACTGG TTCTTCGGCG GCGACATGCG CCTGTGGCTG TCCAATGACC TGGGCATCCC GTTCGACCAG CGCAACGCTC TGGTGGTCGG CCTGGCGATG GGCTTCGCGG TGATCCCGAA CATCTACTCG ATCGCCGAGG ACGCCGTGTT CAGCGTGCCC AAGAGCCTGA CCCTGGGCTC CCTGGCCCTG GGCGCCACGC CCTGGCAGAC CCTGACCCGG GTGGTCATCC TCACCGCCAG TCCGGGCATC TTCTCGGCGC TGATGATCGG CCTGGGGCGC GCCGTCGGCG AAACCATGAT CGTGCTGATG GCCACCGGCA ACACGCCGAT CATGGACATC AACATCTTCG AAGGCCTGCG TACCCTGGCG GCCAACGTCG CGGTGGAGAT GCCCGAGTCG GAAGTCGGCA GCAGCCACTA TCGCGTGCTG TTTCTCGCCG CGCTGGTGCT GCTCAGCTTC ACCTTCATCA TGAACACCGC GGCCGAGATG ATCCGTACCC GCCTGCGCAA GAAATATGCG TCGCTCTGA
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Protein sequence | MTDMAKDFPT AAPQTPRLDF NTPALQRRRR RRAFEDRLAR WYVSIGGLAV LGAITLIFFY LAQVVLPMFQ GAELNVHGEP QRPAWLADQG EALLLAVEEQ NQVAMRLDTH GQVRFFEANG EKRLLGQAAL PIPEGAEILS LGRDQPGSNR LVLGLSNGQA LVVGHSYRVT YPDNRKTITP SIDYPYGEAP IQLDPQGRPL QEVAMNVGND GLLLAGSTGN QVLALELSRE ENLLSGETTL SERRLELPQL AEPVKALLID PRQLWLYVIN GRSTADVFDL RQQTLNGRYK LLADPQAEVT EVAALLGGIS LMIGDSTGGI QQWFMARGEA GPELKNIRGF QLNGSPIVQI LPEERRKGFI ALDAAGNLGV FHSTAHRTLL IEPVAGAAAQ AALSPRADRL LVESAGRLQG FELDNPHPEI SWSALWSKVW YESYDEPKYI WQSTSANSDF EPKLSLSPLT FGTLKAAFYA MLLAAPMAIC AAIYTAYFMA PAMRSKVKPV IELMEALPTV ILGFFAGLFL APYVEAHLPG IFSLLLLTPL GILAAAYGWS RLPESIRLRV PDGWEAALLI PVILAVGALA LGMSGHLENW FFGGDMRLWL SNDLGIPFDQ RNALVVGLAM GFAVIPNIYS IAEDAVFSVP KSLTLGSLAL GATPWQTLTR VVILTASPGI FSALMIGLGR AVGETMIVLM ATGNTPIMDI NIFEGLRTLA ANVAVEMPES EVGSSHYRVL FLAALVLLSF TFIMNTAAEM IRTRLRKKYA SL
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