Gene SO_1723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1723 
Symbol 
ID1169506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1808420 
End bp1810636 
Gene Length2217 bp 
Protein Length738 aa 
Translation table11 
GC content48% 
IMG OID637343619 
Productphosphate ABC transporter, permease protein, putative 
Protein accessionNP_717333 
Protein GI24373290 
COG category[R] General function prediction only 
COG ID[COG4590] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAAAG GCGGACGTTC AAGTCGCAGA GCATTTAAGG ATAAAGCGGC TCAAATTGGG 
GTCACGATTG GCGGCACTAT GGTGTTTGTC GCCTTATTGT TGATCTTCTT CTATTTGCTG
TACGTGATTA AACCCATTTT CGACAGCGCA GATGTGACTC CAGTAAAAAG CGTGAGTTAT
CAACATGCTG AAGTCGCGAC CCTGATGGTC GGTGCCGATG AGCAAAATGA GGTAATGTAC
CGTGTGGCCG CTGATGGCCA AGTGGATTTT TATATCGTTG CCGATGGCAG CTTACTTTCT
AGTTTTACCC CGCCATTGCC AGCAGGTGTG AGCGTGACCA GCGCCGCGGT TGCTGCGCCG
AGTGAGCAAC GCTTTGCACT TGGTTTGAGT AATGGCCAAG CCCTTATTGT GGGGATTGAG
TTTGGCTTAA GCTATCCCAA CGACAAACGT CTGATCACCC CTAAATTACG TTACAGTGCA
GGTGAAACAC CGATCACAAT TGATGAGTCT GGTAGCGCAA TCCACCATTT AGCCTTTAGC
TTTAGCAACG ATAAAATCAC TTTTGCCTAC CAGGATAACA ATGACACATG GCGTTTAAGC
CGTCTCGAAG GTCAAGAAAA CATGATGACC GAAGAGATTG AGTGGACAAC AACAAGTTCG
CTGATCCCCG ATGCGCCTAA AAAAGCCGCG CACCAATTGA TGACGCCAGA TCAACGTCAA
CTGATGCTGC AGATGGGCAA CAAGGTGTTT ATCTACAATA TTCGTGATGC TGAGAACGTT
GATTTAATTC AAGTTATCGA CGCTGAAAAG GACAAGTCTA AGGTGAACAA TATTGCCTTA
CTTGCCGGTG CGAGCTCGAT TCTCGTTAGT TATGACACAG GCGTGGTCAC GCAATACTTC
CAAGTGAATG GTCCTAAAGG CCGTTTATAC CAAGAGATCC GTGAGTTTAG CGATTTAGCG
CCTGTCGCCT CCATTGCTGC TGAGTTTTAC CGCAAAAGTT TCGCCGTGGT CAGTCCCGAG
GGCGAGTTAT CGCTGCTATA CACCACCAGT GAACGCGAAT TGTTTGATAA AACCTTTGAC
CTTAAAAACC CCGGAGCCAT AGGCTTTAGC CCTCGCTCTA ATAGCTTAGT GGTTGAAGCA
AACAATAAAC TCAATATCTT CCAAGTCGAA AACTCCCACC CCGAAGTGTC TTGGAGTGCG
TTATGGAACA AGGTGTGGTA CGAAGGTTAT CCTGAACCTC AGTTTGTATG GCAATCAACC
TCAGGTAGTG ATGACTTTGA GGCCAAATTA AGCTTGATGC CATTGGCCTT TGGCACCATG
AAGGCAGCGT TTTATGCCAT GCTGTTTGCT GTGCCATTGT CGATTGCTGG GGCGATTTAT
ACTGCTTACT TTATGTCGCC AAAGGTACGC GGCATAGTGA AGCCGACCAT TGAGATTATG
GAAGCCTTAC CCACGGTTAT CTTGGGTTTC CTCGCGGGTC TGTGGCTAGC GCCACTGGTT
GAGGAGCATT TGCCAGGCTT ATTAATCTTA TTGATTTTAT TACCAACGGC CATTTTAGTA
TCGGCCTATT CTTGGAGCAA ATTACCCGGC AAGTGGAAAC AGCGTTTGCC TGAAGTGTAT
CAGGAATTGA TGTTGATCCC TGTGATTTGC TTTGTGGGTT GGTTCTCTTT TGCCATCAGC
CCAATGATTG AAGTTGCGCT GTTTGATGGT AACACTCGCC AATTTATCAC TAACGAATTA
GGCATCACCT TCGATCAACG TAACGCGCTG GTTGTGGGGA TCGCCATGGG CTTTGCGGTT
ATCCCTAATA TCTTCTCCAT TGCCGAAGAT GCGATTTTCT CGGTGCCGCG CCATCTCTCT
AATGGTAGTT TAGCCCTTGG CGCGACGCCT TGGCAGACCC TGACCCGGGT TGTGCTGTTG
ACCGCAAGCC CTGGGATTTT TTCTGCGATT ATGATTGGCC TTGGCCGCGC AGTGGGTGAA
ACCATGATTG TACTTATGGC AACCGGTAAC ACCGCCATCA TGGAGTGGAG TGTGTTTGAA
GGCATGCGGA CGCTGGCTGC GAACATTGCG GTGGAAATGC CCGAATCGGC GATTGGTAGC
TCCCATTATC GCGTGTTATT CCTCGCCGCA TTTGTGCTGT TCGTGTTTAC CTTCATCTTT
AACACGATTG CCGAAGTGGT CCGTCAGCGT TTGCGTGATC GCTATAGCTC GCTGTAA
 
Protein sequence
MLKGGRSSRR AFKDKAAQIG VTIGGTMVFV ALLLIFFYLL YVIKPIFDSA DVTPVKSVSY 
QHAEVATLMV GADEQNEVMY RVAADGQVDF YIVADGSLLS SFTPPLPAGV SVTSAAVAAP
SEQRFALGLS NGQALIVGIE FGLSYPNDKR LITPKLRYSA GETPITIDES GSAIHHLAFS
FSNDKITFAY QDNNDTWRLS RLEGQENMMT EEIEWTTTSS LIPDAPKKAA HQLMTPDQRQ
LMLQMGNKVF IYNIRDAENV DLIQVIDAEK DKSKVNNIAL LAGASSILVS YDTGVVTQYF
QVNGPKGRLY QEIREFSDLA PVASIAAEFY RKSFAVVSPE GELSLLYTTS ERELFDKTFD
LKNPGAIGFS PRSNSLVVEA NNKLNIFQVE NSHPEVSWSA LWNKVWYEGY PEPQFVWQST
SGSDDFEAKL SLMPLAFGTM KAAFYAMLFA VPLSIAGAIY TAYFMSPKVR GIVKPTIEIM
EALPTVILGF LAGLWLAPLV EEHLPGLLIL LILLPTAILV SAYSWSKLPG KWKQRLPEVY
QELMLIPVIC FVGWFSFAIS PMIEVALFDG NTRQFITNEL GITFDQRNAL VVGIAMGFAV
IPNIFSIAED AIFSVPRHLS NGSLALGATP WQTLTRVVLL TASPGIFSAI MIGLGRAVGE
TMIVLMATGN TAIMEWSVFE GMRTLAANIA VEMPESAIGS SHYRVLFLAA FVLFVFTFIF
NTIAEVVRQR LRDRYSSL