| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2734 |
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| Symbol | |
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| ID | 4479138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3264559 |
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| End bp | 3266817 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639727340 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_870367 |
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| Protein GI | 117921175 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4590] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAGTC AGGTCATTCA ACCTGGTTCT GCGCCGCAAA GTATGCTGAA AGGCGGACGT
TCAAGTCGCA GGGCATTTAA GGATAAAGCG GCTCAAATTG GGGTCACGAT TGGCGGCACT
ATGGTGTTTG TCGCCTTATT GTTGATCTTC TTCTATTTGC TGTACGTGAT TAAACCCATT
TTCGACAGCG CGGATGTGAC TCCGGTAAAA AGCGTGAGTT ATCAACATGC TGAAGTCGCG
ACCCTGATGG TCGGCGCCGA CGAGCAAAAT GAGGTCATGT ATCGCGTGGC CGCCGATGGC
CAAGTGGATT TCTACACTGT TGCCGATGGC AGCTTACTCT CCAGTTTTAC ACCGCCATTA
CCTGCGGGTG TGAGCGTCAC CAGCGCCGCG ATTGCCGCGC CGAGTGAGCA ACGCTTCGCA
CTGGGGTTAA GTAACGGTCA AGCCTTAATC GTGGGAATCG AATTTGGCTT AAGTTATCCT
AACAACAAGC GCCTTATTAC CCCAAAACTG CGTTACAGCG CGGGTGAAGC GCCGATCACT
ATCGATGAGT CGGGCAGCGC TATCCATCAT TTAGCCTTTA GTTACAGCAA CGATAAAATC
AGCTTCGCCT ACCAAGATGA CAATGGTGCT TGGCGTTTAA GCCGTCTCGA AGGTCAAGAA
AACATGATGA CCGAAGAGGT GGAATGGACG ACCACGGGCG CACTGTTACC TGATGCACCT
AAAAAAGTTG CACACCAATT GATGACACCG GATCAACGCC AATTGATGCT GCAAATGGGC
AACAAGGTGT TTATCTACAA TATCCGTGAT GTTGAAAGCC TAGACTTAAT GCAGGTTATT
GATGCGGAAA AGGAAAAGTC CAAGGTTAAC AACATTGCCT TACTCGCCGG TGCCAGCTCG
ATTCTGGTGA GCTATGACTC TGGTGTGGTG ACCCAGTACT TCCAAGTGAA TGGTCCAAAG
GGCCGTTTAT ACAAAGAGAT CCGTGAGTTT ACCGACTTAG CGCCAGTAGC CTCGATTGCC
TCTGAGTTCT ACCGTAAAAG CTTTGCCGTG GTGAGCCCAG AGGGTGAGTT ATCACTCCTG
TACACCACCA GTGAGCGCGA ACTGTTTGAT GAAAAGTTTG ACCTTAAAAA CCCAGGCGTG
ATCGGCTTTA GCCCTCGTTC GAACGGCCTA GTGGTCGAAG CGAACAAGCA ACTGAATATC
TTCCACGTGG AAAACTCGCA CCCAGAAGTG TCTTGGAGCG CGCTGTGGAA TAAGGTGTGG
TACGAAGGTT ATCCAGAGCC AAAGTTTGTG TGGCAATCCA CCTCGGGTAG CGATGACTTT
GAAGCCAAGC TCAGCTTAAT GCCATTGGCC TATGGCACCA TGAAGGCGGC GTTCTACGCC
ATGCTGTTTG CCGTGCCATT AGCGATTGCG GGCGCCATCT ATACCGCTTA CTTTATGTCG
CCAAAGGTGC GCGGCATTGT TAAGCCAACG ATTGAAATCA TGGAAGCCTT ACCGACGGTT
ATCTTAGGTT TCCTCGCTGG ACTTTGGTTA GCACCGCTGA TTGAAGAGCA CTTGCCGGGC
ATCTTAGTGC TGCTGGTACT GCTGCCGACG GCGATTCTGG TGTCGGCTTA CTCTTGGAGC
AAATTACCCG GTACTTGGAA ACAGCGTTTA CCTGAAGTCT ATCAGGAGCT GATGCTCATT
CCGGTTATCT GCTTTGTGGG TTGGTTCTCC TTTGCCATTA GCCCGATGAT CGAAGTGGCG
CTGTTCGATG GTAACACTCG TCAATTTATC ACTAACGAAT TAGGCATCAC CTTCGACCAA
CGTAACGCGC TGGTAGTGGG TATCGCCATG GGCTTTGCGG TTATTCCAAC GATTTTCTCG
ATTGCAGAAG ACGCGATTTT CTCTGTGCCA CGCCATTTAT CCAACGGCAG TTTGGCGCTG
GGCGCGACGC CTTGGCAAAC CCTGACACGT GTAGTGCTGT TGACCGCAAG CCCAGGGATT
TTCTCAGCGG TGATGATGGG TCTTGGTCGC GCTGTGGGTG AAACCATGAT CGTACTGATG
GCAACGGGTA ACACCGCCAT CATGGAATGG AGCGTGTTTG AAGGTATGCG TACGCTGGCG
GCTAACATCG CGGTGGAAAT GCCTGAGTCG GCGATTGGCA GCTCGCACTA CCGTGTGCTG
TTCCTCGCGG CCTTCGTTCT GTTCGTATTT ACCTTCTTCT TTAACACGAT TGCCGAAGTG
GTAAGACAGC GTCTGCGTGA CCGCTATAGC TCGCTGTAA
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| Protein sequence | MESQVIQPGS APQSMLKGGR SSRRAFKDKA AQIGVTIGGT MVFVALLLIF FYLLYVIKPI
FDSADVTPVK SVSYQHAEVA TLMVGADEQN EVMYRVAADG QVDFYTVADG SLLSSFTPPL
PAGVSVTSAA IAAPSEQRFA LGLSNGQALI VGIEFGLSYP NNKRLITPKL RYSAGEAPIT
IDESGSAIHH LAFSYSNDKI SFAYQDDNGA WRLSRLEGQE NMMTEEVEWT TTGALLPDAP
KKVAHQLMTP DQRQLMLQMG NKVFIYNIRD VESLDLMQVI DAEKEKSKVN NIALLAGASS
ILVSYDSGVV TQYFQVNGPK GRLYKEIREF TDLAPVASIA SEFYRKSFAV VSPEGELSLL
YTTSERELFD EKFDLKNPGV IGFSPRSNGL VVEANKQLNI FHVENSHPEV SWSALWNKVW
YEGYPEPKFV WQSTSGSDDF EAKLSLMPLA YGTMKAAFYA MLFAVPLAIA GAIYTAYFMS
PKVRGIVKPT IEIMEALPTV ILGFLAGLWL APLIEEHLPG ILVLLVLLPT AILVSAYSWS
KLPGTWKQRL PEVYQELMLI PVICFVGWFS FAISPMIEVA LFDGNTRQFI TNELGITFDQ
RNALVVGIAM GFAVIPTIFS IAEDAIFSVP RHLSNGSLAL GATPWQTLTR VVLLTASPGI
FSAVMMGLGR AVGETMIVLM ATGNTAIMEW SVFEGMRTLA ANIAVEMPES AIGSSHYRVL
FLAAFVLFVF TFFFNTIAEV VRQRLRDRYS SL
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