| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0180 |
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| Symbol | |
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| ID | 5106860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 181639 |
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| End bp | 183924 |
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| Gene Length | 2286 bp |
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| Protein Length | 761 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640501396 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001185686 |
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| Protein GI | 146305221 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4590] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACT TGGCAAACGA CACCGTGAAC CGACCGCAGA ACCCCCTGGG GATCGACTTC
AACACCCCCG CCCTGCAACG CAAGCGCCGC CTGCGCGCGC TGAAGGATCG CCTGGCGCGC
TGGTACGTCT CCATTGGCGG CCTGGCGGTA CTCGGTGCCA TCACCCTGAT CTTCTTCTAC
TTGGCCCATG TGGTGCTACC CATGTTCCAG GGCGCCGAAA TCGAGGCGCG CAAGGCCCAG
CAGCCAGCCT GGCTCGGCCA GGCCGGTGCG CCCCTGCTGC TGGCCATCGA AGAGCAGAAC
CAGGTGGCCA TGCGTCTGGA CGACGCCGGC GTGGTGCAGT TCTTCGAGCT GCGCACCGGC
GAGCCGCTGC AGCGCGTGCA ACTGCCGTTG CCGGAAGGCG TCAGCGTCGC CTCGGTAGCG
CAGGATCAGC CGGGCAGCCG GCGCGCCGTG CTCGGCCTGT CCAACGGCCA GGTGCTGATC
GTTCAGCACA ACTACAAGGT CAGCTATCCG GACAACGTCC GCGTCATCAC CCCGCAGATC
GACTACCCCT ACGGCGAGAC GCCGATCGAG CTGGACCCGC AGGGGCGCCC GCTCGAGCAC
GTGGCGTTGA ACCTCAACAG CGGCACCCTG ATGCTGGCCG GTGCCACCGG CAGCGAGCTG
CACCTGATCA GCATCGGGCG CGAGGAAAAC CTGTTCACCG GCGAGGTGAG CCTGAGCGAG
GAGCGCATCG GCCTGCCGCA GATCGGCGAG CCGATCACCC AGCTGATCCT CGACCCGCGG
CAGATGTGGC TGTACGTGTT CAACGGCGAC TCCACCGCCG ATGTCTTCGA CCTGCGCAAG
CGCAGCCTCA ACGGCCGCTA CGACCTGCTC AAGGACGCCT CCAATCGCGT CACCAGCGCC
AAGGCGCTGC TGGGCGGCAT CTCGATCATG ATCGGTGACG CCAAGGGCGG CATCCAGCAG
TGGTTCATGG TGCGCGATGG CGACGGCAAG TCCACCTTCC AGCCGATCCG CAGCTTCCAG
CTGGGCACCA GCGCCATCAC CCAGATCCTC CCCGAGGAGC GCCGCAAGGG CTTCATGGCG
CTGGACGAGA GCGGTCGCCT GGGCATCTTC CACAGCACCG CGCACCGCAC CCTGCTCAAG
GAGCAGGTCG CCGAAGGCCG CGGTATTGCC GCCCTGTCGC CGCGCGCCAG CCGCGTGCTG
GTGGAGTCGG ACGGCAAGCT GCAGCGCTTC GTGGTCGACA ACCCGCACCC GGAAGTGTCC
TGGAGCGCGC TGTGGGGCAA GGTCTGGTAC GAGAGCTACC CGGAGCCGGA TTACGTCTGG
CAGTCCACCT CGGCCAACAC CGATTTCGAG GCCAAGCTGA GCCTCTCGCC GCTGGCCTTC
GGTACTCTCA AGGCCGCCTT CTACGCCATG CTTCTGGCCG CGCCCCTGGC GGTGGCCGCG
GCAATCTACA CCGCCTACTT CATGGCGCCG CGCATGCGCA CCAAGGTCAA GCCGGTGATC
GAGCTGATGG AGGCGCTGCC GACGGTGATC CTCGGTTTCT TCGCCGGCCT GTTCCTCGCG
CCGTTCCTGG AGAACCACCT GCCCGGCATA TTCAGCCTGC TGCTGTTGAC CCCGGTGGGG
ATCCTCGCCG CCGGTTACCT GTGGACCAAG ATGCCCGAGT CGGTCCGCCA CCGCGTGCCG
GACGGTTGGG AAGCCGCGCT GCTGATCCCG GTGGTGATCG CCGTGGGCTG GTTCTCGCTG
TCGATCAGCG GCCACCTGGA GAACTGGTTC TTCGACGGCA ACATGCGCCT GTGGCTGTCC
AACGACCTGG GTATTCCGTT CGATCAGCGC AACGCCCTGG TGGTGGGTCT GGCCATGGGT
TTCGCGGTGA TCCCGAACAT CTACTCGATC GCCGAAGACG CCGTGTTCAG CGTGCCCAAG
AGCCTGACCT TCGGTTCTCT GGCCCTCGGC GCCACGCCCT GGCAGACCCT GACCCGCGTG
GTGATCCTCA CCGCCAGCCC GGGCATCTTC TCGGCGCTGA TGATTGGCAT GGGCCGCGCC
GTGGGCGAGA CCATGATCGT GCTGATGGCC ACCGGCAACA CGCCGATCAT GGACATCAAC
ATCTTCGAAG GCATGCGCAC CCTGGCTGCC AACGTCGCGG TGGAAATGCC CGAGTCGGAA
GTCGGCGGCA CCCACTATCG CGTGCTGTTC CTCGCCGCGC TGGTACTGCT GCTGTTCACC
TTCGTGATGA ACACCCTGGC CGAGCTGATT CGTCAGCGCC TGCGCACCAA GTATTCGTCG
CTCTAA
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| Protein sequence | MNDLANDTVN RPQNPLGIDF NTPALQRKRR LRALKDRLAR WYVSIGGLAV LGAITLIFFY
LAHVVLPMFQ GAEIEARKAQ QPAWLGQAGA PLLLAIEEQN QVAMRLDDAG VVQFFELRTG
EPLQRVQLPL PEGVSVASVA QDQPGSRRAV LGLSNGQVLI VQHNYKVSYP DNVRVITPQI
DYPYGETPIE LDPQGRPLEH VALNLNSGTL MLAGATGSEL HLISIGREEN LFTGEVSLSE
ERIGLPQIGE PITQLILDPR QMWLYVFNGD STADVFDLRK RSLNGRYDLL KDASNRVTSA
KALLGGISIM IGDAKGGIQQ WFMVRDGDGK STFQPIRSFQ LGTSAITQIL PEERRKGFMA
LDESGRLGIF HSTAHRTLLK EQVAEGRGIA ALSPRASRVL VESDGKLQRF VVDNPHPEVS
WSALWGKVWY ESYPEPDYVW QSTSANTDFE AKLSLSPLAF GTLKAAFYAM LLAAPLAVAA
AIYTAYFMAP RMRTKVKPVI ELMEALPTVI LGFFAGLFLA PFLENHLPGI FSLLLLTPVG
ILAAGYLWTK MPESVRHRVP DGWEAALLIP VVIAVGWFSL SISGHLENWF FDGNMRLWLS
NDLGIPFDQR NALVVGLAMG FAVIPNIYSI AEDAVFSVPK SLTFGSLALG ATPWQTLTRV
VILTASPGIF SALMIGMGRA VGETMIVLMA TGNTPIMDIN IFEGMRTLAA NVAVEMPESE
VGGTHYRVLF LAALVLLLFT FVMNTLAELI RQRLRTKYSS L
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