| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3168 |
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| Symbol | |
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| ID | 6117487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3885410 |
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| End bp | 3887668 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634713 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001761534 |
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| Protein GI | 170727508 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4590] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.618473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACTC AGGCGATAAA ACCTGATCCT AAGGCTAACG CTCTACTGAT GGGCAAAGGT
TCGAGTCGCA GGGCGATCAC GGACAAGATG ACTCAGGTTG GTGTGACCAT AGGCGGCACC
ATGGTGTTTG TGGCGCTTTT ATTGATCTTC TTTTATCTCT TATATGTTGT TAAACCTATT
TTTGATGGGG CTGAAGTTAA GCCTCTAGTG AGTGTTGAAC TGTCGGATGA TGCGAGCCCA
GCTTTGATGG TGGGTAGCGA TGAGCAAAAT GAGCTTATCT ACCGCGTTTC AAATACAGGC
CAGGTAGATT TCTATAAAGC GAAAACAGGT CAACTGCTTG AAAGGGAACA ACTGATTTTA
CCTAACGGTA CTCAAGTAAG CAGTAGTGCT GTTTCAGCGC CGAGTGAACA AAGGTTTGCC
CTTGGGCTCG ATAATGGTCA GCTTTTACTC GCAGGCATTA GCTTTGGGGT GACTTACCCA
GAAAATGAAC GTCTTATTAC ACCTGATATC AGGTTCCCTG CTGGTACACA GGCATTAACT
ATTGATGAGA ACGGTTCTGC ACTTCATCAC CTGACTTTTG GTTATAGCAG TGAAGTGATG
AGTTTTGCCT ATCAAGATGA CGCTAAAGTG TGGCGTTTAG CACGTCAAGA AGGTGAAGAG
AACATGATGA CCGAAGAGGT TGAATGGATC TCCTCAACGG GTGTTATTCA AGAAGCTCCC
TCGAATGTGC AGCAAGCGCT AATGACACCC GATCAACGCC AATTGATCTT AAGAAGCAGT
GACAAGTTGT TTATCTACGA TATTCGTGAT GTCGAAGATA TTCAGTTGAT GCAAGTGTTA
GCACTTGATT TGGCAAATAC ACAAGTTAAA AGTGTCAGTT TACTTGCTGG TGCCAGCTCG
CTTTTGGTGA GTTATGACTC TGGTGTTGTG TTGCAATACT TTCAGGTAAA CGGCGAGAGG
GGTCGCCAAT ATCAGGAGAT TCGAGGTTTC GACAAACTCG GTGATGTTGC CAGTATTGCC
AGCGAGTTTT ACCGTAAGAG CTTTGTGACG GTAAGTGATA AAGGCGAGCT CTCTCTGCTC
TATACCACTA GTCAGCGTAA GCTGTTTTCT GAGAATTTTG ATCTGAAGAA TCCGGGTAAA
ATAGGGTTTA GCCCAAGATC GAATGCACTG GTTGTTGAGG CTGGAAATAA GTTACACCTT
TTCAATGTTG AGAATGAGCA TCCAGAGGTT TCTTGGAGCG CCATGTGGAG CAAGGTTTGG
TATGAGGGTT ATCCTGAACC AAAATATGTG TGGCAGTCGA CCTCTGGTTC TGATGACTTT
GAGGCAAAAT TAAGCTTAAT GCCTTTGGCG TTTGGTACTA TGAAAGCTGC GCTATATGCC
ATGTTGTTTG CAACGCCTTT AGCGATTGCT GGTGCGGTAT ACACGGCTTA CTTCATGTCT
CCTAAAGTCC GCTCTATTGT TAAACCAACC ATTGAGATTA TGGAAGCTCT GCCGACGGTT
ATTTTAGGCT TCTTAGCTGG TCTTTGGCTT GCTCCCTTGA TAGAGGATAA TCTGCCTGGA
ATATTGGTTT TACTCATCTT GCTTCCGGTG TCGATTCTTT CAAGTGCCTT TGCCTGGTAT
CACCTGCCTG GTAAGTGGAA GCAGAGGTTA CCTGATACTT ATCAAGAGTT GATGTTAATC
CCTGTCATCC TGTTTATCGG TTGGTTCTCA TTTACCATCA GCCCAGCGAT TGAGATCCTC
CTGTTTGATG GTGATTCACG CATGTTTATT ACTAATGAAC TAGGGATCAC GTTCGATCAG
CGAAACGCTC TTGTTGTCGG TATCGCTATG GGCTTTGCGG TTATTCCGAC CATCTTCTCT
ATTGCTGAAG ATGCGGTTTT CTCGGTTCCT CGTCACCTCT CAAATGGTAG CTTGGCTCTT
GGGGCTACCA ACTGGCAAAC CTTAACGCGC GTGGTGCTAT TAACTGCAAG TCCTGGGATA
TTCTCCGCAG TGATGATGGG GCTTGGCCGC GCTGTTGGTG AAACCATGAT CGTACTGATG
GCTACGGGTA ATACGGCCAT CATGGAGTGG AGTGTGTTTG AAGGCATGAG AACCCTAGCG
GCTAATATCG CTGTGGAGAT GCCTGAGTCG GCGATAGGCA GCTCACACTA TCGAGTGCTC
TTCTTGGCCG CTTTTGTACT GTTTATCTTT ACATTCTTCT TTAACACTAT CGCTGAAGTC
GTTAGACAAC GTCTTCGTGA ACGTTACAGC TCACTTTAA
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| Protein sequence | METQAIKPDP KANALLMGKG SSRRAITDKM TQVGVTIGGT MVFVALLLIF FYLLYVVKPI
FDGAEVKPLV SVELSDDASP ALMVGSDEQN ELIYRVSNTG QVDFYKAKTG QLLEREQLIL
PNGTQVSSSA VSAPSEQRFA LGLDNGQLLL AGISFGVTYP ENERLITPDI RFPAGTQALT
IDENGSALHH LTFGYSSEVM SFAYQDDAKV WRLARQEGEE NMMTEEVEWI SSTGVIQEAP
SNVQQALMTP DQRQLILRSS DKLFIYDIRD VEDIQLMQVL ALDLANTQVK SVSLLAGASS
LLVSYDSGVV LQYFQVNGER GRQYQEIRGF DKLGDVASIA SEFYRKSFVT VSDKGELSLL
YTTSQRKLFS ENFDLKNPGK IGFSPRSNAL VVEAGNKLHL FNVENEHPEV SWSAMWSKVW
YEGYPEPKYV WQSTSGSDDF EAKLSLMPLA FGTMKAALYA MLFATPLAIA GAVYTAYFMS
PKVRSIVKPT IEIMEALPTV ILGFLAGLWL APLIEDNLPG ILVLLILLPV SILSSAFAWY
HLPGKWKQRL PDTYQELMLI PVILFIGWFS FTISPAIEIL LFDGDSRMFI TNELGITFDQ
RNALVVGIAM GFAVIPTIFS IAEDAVFSVP RHLSNGSLAL GATNWQTLTR VVLLTASPGI
FSAVMMGLGR AVGETMIVLM ATGNTAIMEW SVFEGMRTLA ANIAVEMPES AIGSSHYRVL
FLAAFVLFIF TFFFNTIAEV VRQRLRERYS SL
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