More than 300 homologs were found in PanDaTox collection
for query gene Swoo_3168 on replicon NC_010506
Organism: Shewanella woodyi ATCC 51908



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010501  PputW619_0146  binding-protein-dependent transport systems inner membrane component  50.81 
 
 
762 aa  665    Pseudomonas putida W619  Bacteria  normal  0.212947  normal 
 
 
-
 
NC_009052  Sbal_1538  binding-protein-dependent transport systems inner membrane component  75.13 
 
 
752 aa  1106    Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2818  binding-protein-dependent transport systems inner membrane component  75 
 
 
752 aa  1105    Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_3642  phosphate ABC transporter, permease protein  49.61 
 
 
778 aa  713    Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1723  phosphate ABC transporter, permease protein, putative  74.25 
 
 
738 aa  1093    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_1698  binding-protein-dependent transport systems inner membrane component  76.6 
 
 
752 aa  1178    Shewanella loihica PV-4  Bacteria  normal  normal  0.719566 
 
 
-
 
NC_009439  Pmen_0180  binding-protein-dependent transport systems inner membrane component  49.66 
 
 
761 aa  653    Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_5040  binding-protein dependent transport system inner membrane protein  48.12 
 
 
753 aa  646    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.921779 
 
 
-
 
NC_010322  PputGB1_5375  binding-protein-dependent transport systems inner membrane component  50.41 
 
 
762 aa  660    Pseudomonas putida GB-1  Bacteria  normal  normal  0.690335 
 
 
-
 
NC_009997  Sbal195_1566  binding-protein-dependent transport systems inner membrane component  75.13 
 
 
752 aa  1101    Shewanella baltica OS195  Bacteria  normal  0.637323  normal  0.18855 
 
 
-
 
NC_007492  Pfl01_5614  binding-protein dependent transport system inner membrane protein  48.98 
 
 
760 aa  644    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.536938  normal  0.133836 
 
 
-
 
NC_009656  PSPA7_6147  membrane protein component of ABC phosphate transporter  48.37 
 
 
761 aa  643    Pseudomonas aeruginosa PA7  Bacteria  normal  0.297705  n/a   
 
 
-
 
NC_009665  Shew185_1533  binding-protein-dependent transport systems inner membrane component  75.13 
 
 
752 aa  1106    Shewanella baltica OS185  Bacteria  normal  0.0241057  n/a   
 
 
-
 
NC_009831  Ssed_1501  binding-protein-dependent transport systems inner membrane component  83.24 
 
 
752 aa  1182    Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000210465  normal 
 
 
-
 
NC_009438  Sputcn32_1434  binding-protein-dependent transport systems inner membrane component  75.53 
 
 
752 aa  1130    Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_2584  binding-protein-dependent transport systems inner membrane component  71.94 
 
 
751 aa  1068    Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_2745  binding-protein-dependent transport systems inner membrane component  79.92 
 
 
751 aa  1192    Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_2560  binding-protein-dependent transport systems inner membrane component  75 
 
 
752 aa  1092    Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2627  binding-protein-dependent transport systems inner membrane component  74.6 
 
 
752 aa  1090    Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1357  binding-protein-dependent transport systems inner membrane component  73.14 
 
 
751 aa  1110    Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_5236  binding-protein-dependent transport systems inner membrane component  50.81 
 
 
762 aa  671    Pseudomonas putida F1  Bacteria  normal  0.644471  normal  0.245739 
 
 
-
 
NC_008577  Shewana3_2734  binding-protein-dependent transport systems inner membrane component  75.13 
 
 
752 aa  1125    Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3168  binding-protein-dependent transport systems inner membrane component  100 
 
 
752 aa  1527    Shewanella woodyi ATCC 51908  Bacteria  normal  0.618473  normal 
 
 
-
 
NC_008700  Sama_1408  phosphate ABC transporter, permease protein, putative  71.28 
 
 
751 aa  1057    Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0601702 
 
 
-
 
NC_009654  Mmwyl1_4416  binding-protein-dependent transport systems inner membrane component  48.14 
 
 
755 aa  689    Marinomonas sp. MWYL1  Bacteria  normal  0.383824  normal 
 
 
-
 
NC_007484  Noc_2398  ABC transporter, inner membrane subunit  45.43 
 
 
761 aa  635  1e-180  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.220176  n/a   
 
 
-
 
NC_012560  Avin_48590  Phosphate ABC-transporter, permease protein PstC  48.57 
 
 
762 aa  629  1e-179  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_5328  binding-protein-dependent transport systems inner membrane component  51.04 
 
 
669 aa  622  1e-177  Pseudomonas putida KT2440  Bacteria  normal  0.662544  hitchhiker  0.00483454 
 
 
-
 
NC_007520  Tcr_0537  binding-protein dependent transport system inner membrane protein  44.83 
 
 
755 aa  608  1e-173  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_70850  membrane protein component of ABC phosphate transporter  49.41 
 
 
677 aa  609  1e-173  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.721295 
 
 
-
 
NC_004578  PSPTO_5486  phosphate ABC transporter, permease protein, putative  49.63 
 
 
677 aa  608  9.999999999999999e-173  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0956  binding-protein-dependent transport systems inner membrane component  44.53 
 
 
756 aa  607  9.999999999999999e-173  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.137711  normal  0.159136 
 
 
-
 
NC_011312  VSAL_I2454  phosphate import protein, transmembrane component PstC  44.76 
 
 
735 aa  590  1e-167  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.530002  n/a   
 
 
-
 
NC_008789  Hhal_0095  binding-protein-dependent transport systems inner membrane component  44.65 
 
 
775 aa  588  1e-166  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_004380  phosphate transport system permease protein PstC  44.34 
 
 
734 aa  578  1e-164  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1135  binding-protein-dependent transport systems inner membrane component  43.33 
 
 
771 aa  571  1e-161  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.975413 
 
 
-
 
NC_009783  VIBHAR_01031  hypothetical protein  44.22 
 
 
734 aa  566  1e-160  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A0258  phosphate ABC transporter, permease protein  44.81 
 
 
731 aa  553  1e-156  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2652  binding-protein-dependent transport systems inner membrane component  43.32 
 
 
765 aa  535  1e-150  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3540  binding-protein-dependent transport systems inner membrane component  42.32 
 
 
724 aa  511  1e-143  Serratia proteamaculans 568  Bacteria  normal  0.875094  normal 
 
 
-
 
NC_009708  YpsIP31758_1228  phosphate ABC transporter, permease protein PstC  42.44 
 
 
743 aa  509  1e-143  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1334  binding-protein-dependent transport systems inner membrane component  42.16 
 
 
722 aa  508  9.999999999999999e-143  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2944  binding-protein-dependent transport systems inner membrane component  41.76 
 
 
722 aa  496  1e-139  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1345  binding-protein-dependent transport systems inner membrane component  42.46 
 
 
719 aa  498  1e-139  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2671  binding-protein-dependent transport systems inner membrane component  41.05 
 
 
718 aa  467  9.999999999999999e-131  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1237  binding-protein-dependent transport systems inner membrane component  39.97 
 
 
743 aa  447  1.0000000000000001e-124  Dickeya zeae Ech1591  Bacteria  normal  0.0916528  n/a   
 
 
-
 
NC_008609  Ppro_3158  binding-protein-dependent transport systems inner membrane component  36.59 
 
 
742 aa  441  9.999999999999999e-123  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010655  Amuc_1305  binding-protein-dependent transport systems inner membrane component  36.03 
 
 
784 aa  427  1e-118  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal  0.462831 
 
 
-
 
NC_007498  Pcar_0656  ABC-type phosphate transport system, permease component  36.83 
 
 
742 aa  427  1e-118  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.770286  n/a   
 
 
-
 
NC_010814  Glov_0619  binding-protein-dependent transport systems inner membrane component  49.01 
 
 
641 aa  401  9.999999999999999e-111  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_3267  binding-protein-dependent transport systems inner membrane component  34.68 
 
 
706 aa  363  5.0000000000000005e-99  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03151  putative phosphate ABC transporter, permease protein  34.44 
 
 
727 aa  298  3e-79  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_0419  phosphate ABC transporter, inner membrane subunit PstC  39.65 
 
 
325 aa  162  2e-38  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.730812 
 
 
-
 
NC_011891  A2cp1_4147  phosphate ABC transporter, inner membrane subunit PstC  39.65 
 
 
336 aa  160  8e-38  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_4121  phosphate ABC transporter, inner membrane subunit PstC  39.65 
 
 
336 aa  160  8e-38  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_4005  phosphate ABC transporter inner membrane protein  40.09 
 
 
336 aa  160  1e-37  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.475796  n/a   
 
 
-
 
NC_011899  Hore_21615  phosphate ABC transporter, permease protein PstA  38.86 
 
 
318 aa  158  4e-37  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_1681  phosphate ABC transporter, inner membrane subunit PstC  34.26 
 
 
387 aa  142  1.9999999999999998e-32  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.091837  n/a   
 
 
-
 
NC_007955  Mbur_0751  phosphate ABC transporter inner membrane protein  50.34 
 
 
297 aa  142  1.9999999999999998e-32  Methanococcoides burtonii DSM 6242  Archaea  normal  0.0108561  n/a   
 
 
-
 
NC_013517  Sterm_4079  phosphate ABC transporter, inner membrane subunit PstC  29.81 
 
 
357 aa  141  4.999999999999999e-32  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_1234  phosphate ABC transporter, inner membrane subunit PstC  33.44 
 
 
387 aa  140  7.999999999999999e-32  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal  0.352319 
 
 
-
 
NC_007519  Dde_1061  phosphate ABC transporter permease  47.52 
 
 
298 aa  138  3.0000000000000003e-31  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009051  Memar_2277  phosphate ABC transporter, inner membrane subunit PstC  44.09 
 
 
646 aa  138  4e-31  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_011059  Paes_0944  phosphate ABC transporter, inner membrane subunit PstC  33.23 
 
 
387 aa  137  5e-31  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal  0.502812 
 
 
-
 
NC_007512  Plut_1244  phosphate ABC transporter permease  34.64 
 
 
387 aa  137  8e-31  Chlorobium luteolum DSM 273  Bacteria  normal  0.81986  normal  0.80225 
 
 
-
 
NC_010803  Clim_1619  phosphate ABC transporter, inner membrane subunit PstC  32.09 
 
 
388 aa  137  9.999999999999999e-31  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0764  phosphate ABC transporter, inner membrane subunit PstC  45.45 
 
 
297 aa  136  9.999999999999999e-31  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.316 
 
 
-
 
NC_011899  Hore_21570  phosphate ABC transporter, inner membrane subunit PstC  44.52 
 
 
291 aa  134  3.9999999999999996e-30  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A1779  phosphate ABC transporter, permease protein  47.68 
 
 
296 aa  134  5e-30  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_011883  Ddes_0565  phosphate ABC transporter, inner membrane subunit PstC  45.33 
 
 
296 aa  132  2.0000000000000002e-29  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.0134721  n/a   
 
 
-
 
NC_011832  Mpal_0481  phosphate ABC transporter, inner membrane subunit PstC  41.49 
 
 
645 aa  132  2.0000000000000002e-29  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_008554  Sfum_2887  phosphate ABC transporter, inner membrane subunit PstC  44.16 
 
 
297 aa  132  2.0000000000000002e-29  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.110489 
 
 
-
 
NC_013202  Hmuk_0356  phosphate ABC transporter, inner membrane subunit PstC  29.03 
 
 
350 aa  129  3e-28  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.0241985  normal  0.511021 
 
 
-
 
NC_009634  Mevan_0421  phosphate ABC transporter, inner membrane subunit PstC  43.66 
 
 
290 aa  128  5e-28  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_008639  Cpha266_1039  phosphate ABC transporter, inner membrane subunit PstC  31.94 
 
 
387 aa  128  5e-28  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.0327987  n/a   
 
 
-
 
NC_009253  Dred_2105  phosphate ABC transporter, inner membrane subunit PstC  42.11 
 
 
283 aa  126  2e-27  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_2982  phosphate ABC transporter permease  48.25 
 
 
649 aa  125  2e-27  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_009943  Dole_1926  phosphate ABC transporter, inner membrane subunit PstC  45.32 
 
 
309 aa  125  3e-27  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0478834  n/a   
 
 
-
 
NC_008554  Sfum_0704  phosphate ABC transporter, inner membrane subunit PstC  45.77 
 
 
303 aa  123  9.999999999999999e-27  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009712  Mboo_1918  phosphate ABC transporter, inner membrane subunit PstA  44.14 
 
 
604 aa  121  3.9999999999999996e-26  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.396887  normal 
 
 
-
 
NC_012034  Athe_1162  phosphate ABC transporter, inner membrane subunit PstC  42.86 
 
 
284 aa  121  6e-26  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0348  phosphate ABC transporter, inner membrane subunit PstC  40.41 
 
 
291 aa  120  7e-26  Methanococcus maripaludis C7  Archaea  normal  hitchhiker  0.0000428257 
 
 
-
 
NC_009635  Maeo_0570  phosphate ABC transporter, inner membrane subunit PstC  41.78 
 
 
292 aa  120  7e-26  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_009135  MmarC5_0488  phosphate ABC transporter, inner membrane subunit PstC  40.41 
 
 
291 aa  120  9.999999999999999e-26  Methanococcus maripaludis C5  Archaea  normal  0.456942  n/a   
 
 
-
 
NC_010571  Oter_2546  phosphate ABC transporter, inner membrane subunit PstC  42.21 
 
 
535 aa  119  1.9999999999999998e-25  Opitutus terrae PB90-1  Bacteria  normal  normal  0.153415 
 
 
-
 
NC_009975  MmarC6_1571  phosphate ABC transporter, inner membrane subunit PstC  39.73 
 
 
291 aa  119  3e-25  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_008942  Mlab_1117  hypothetical protein  36.04 
 
 
627 aa  117  8.999999999999998e-25  Methanocorpusculum labreanum Z  Archaea  normal  normal 
 
 
-
 
NC_013922  Nmag_2359  phosphate ABC transporter, inner membrane subunit PstC  27.21 
 
 
358 aa  117  1.0000000000000001e-24  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_011729  PCC7424_2810  phosphate ABC transporter, inner membrane subunit PstC  30.1 
 
 
327 aa  115  4.0000000000000004e-24  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.107493 
 
 
-
 
NC_010001  Cphy_1668  phosphate ABC transporter, inner membrane subunit PstC  32.58 
 
 
281 aa  114  5e-24  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.000000035104  n/a   
 
 
-
 
NC_008553  Mthe_0705  phosphate ABC transporter, inner membrane subunit PstC  37.89 
 
 
301 aa  114  5e-24  Methanosaeta thermophila PT  Archaea  normal  0.0779351  n/a   
 
 
-
 
NC_010718  Nther_0980  phosphate ABC transporter, inner membrane subunit PstC  45.45 
 
 
303 aa  114  7.000000000000001e-24  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.120988 
 
 
-
 
NC_013501  Rmar_1828  phosphate ABC transporter, inner membrane subunit PstC  30.65 
 
 
314 aa  112  3e-23  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1094  phosphate ABC transporter, inner membrane subunit PstC  38.5 
 
 
284 aa  112  3e-23  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1098  phosphate ABC transporter, permease protein  30.04 
 
 
325 aa  111  4.0000000000000004e-23  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1959  phosphate ABC transporter, inner membrane subunit PstC  40.12 
 
 
290 aa  111  6e-23  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_4409  phosphate ABC transporter, inner membrane subunit PstC  43.84 
 
 
296 aa  109  2e-22  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0464334  normal 
 
 
-
 
NC_007514  Cag_0500  phosphate ABC transporter permease  34.76 
 
 
414 aa  109  2e-22  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A1086  phosphate ABC transporter permease  42.18 
 
 
310 aa  109  2e-22  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_0794  phosphate ABC transporter permease  39.04 
 
 
320 aa  108  3e-22  Methylobacillus flagellatus KT  Bacteria  normal  hitchhiker  0.00214055 
 
 
-
 
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