| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2584 |
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| Symbol | |
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| ID | 4019101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3092816 |
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| End bp | 3095071 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637956628 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_563586 |
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| Protein GI | 91793935 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4590] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAGTC AGGTAAGTCA GCCGGCTTCT GCTGCCAGCA AGATTTTAGG TGGCAGCAAG
GCAAAAAGCA GGGCATTTAA AGATAAGGCT GCACAAGTGG GTGTCACCAT AGGTGGCACC
TTAGTCTTCG TCGCCTTATT GTTGATTTTC TTTTATTTAC TTTATGTTAT CAAACCTATT
TTTGATGGGG CAGATATTCG CCCTCTAAGT AAGATTAGTT TAATAGACAC TCAGACACCT
AGCCTGATGA TAGGCACAGA TGAACAAAAC GAAATTGCCT TCAGGGTGCT AATGGATGGC
CAAGTTGAAT TCTATTCTGT GGCCAGTGGT CAACTGCTAA GCTCACAAAT ACCTCTACTC
AGTGAAGGCG AAACTGTCAC CAGTAGTGCC AAATCTTCAC CTAATGAGCA AAGGTTTGCC
TTAGGGCTTA GCTCGGGCAA GGTGTTGGTC GTCGATGTCG ATTTCGCTGT GACCTACCCA
GACAATCAAA GGCTTATCAC CCCAAGATTG CGCTATCCCA ATGGTGAAAC GCCGCTTAAT
CTATCCACGA ATTCTGCCGT GTATAACCTA GCATTTGATT ACAGCGATAG CCGCATGAGT
TTTGCTTATC AAGACAAGGA TGGCCAGTGG CGTTTTAACC GTCAAGAAGG CGAAGAGAAC
ATGATGACAG AGGAAGTTGA GTGGAGCTCA ACAGAATCTA TTATTGCTGA TGCCCCCGCC
AATAAAACCC ATGCCTTAGT CACCCCAGAT CATAGCCAAT TAATTTTGCC TGGCACAGAT
AAAATTTTCG TCTACAACAC CCGCGATGCC GATGCCATTG ACTTGCTTCA AGTCATAGAC
GTGAGAAACG GACAAGATAC CGTGAGCCAA GTGTCGTTAC TGGCGGGGGC GAGCTCCATT
CTAGTGAGCT ATCACTCTGG CCTCGTGGCG CAATACTTTC AGGTCAATAG TGACAGTGGC
CGCTTATATC AACGCATTCG TCAATTCGAT GAGCTTGCGC CCATGTCAGC TATCGCCACC
GAGTTTTACC GCAAAAGCTT TGCTGTGGTG AGCAAAGAGG GTGAGTTATC TCTACTCTAT
ACCACCAGTG AACGTAAATT ATTTGAACAG AAAATGGCGC TTCAATCACC AAGCAATATG
GCGTTTAGTC CCCGTTCCAA TGCCTTGATC ATCGAAACTA ACCAAGTACT TAGCCTGTTT
GCGGTTGATA ATAGTCACCC AGAAGTCAGC TGGAGTGCCA TGTGGGAAAA GGTGTGGTAC
GAAGGTTACC CTGAGCCTAA ATACGTGTGG CAGTCGACGT CTGGCTCTGA TGATTTTGAA
GCCAAATTGA GCTTGATGCC GCTGGCGTTT GGCACCATGA AGGCGGCGTT CTACGCCATG
CTATTTGCTG TGCCGCTTGC GGTAGCAGGC GCTATTTATA CCGCTTACTT TATGTCTCCT
AAGGTGCGCA GCATAGTGAA GCCCACCATC GAAATTATGG AAGCGCTGCC GACTGTGATT
TTAGGTTTCT TGGCTGGATT ATGGCTCGCG CCGTTAATTG AGGATCACCT CCCTGGGATT
TTCATGCTGC TTGTGCTGCT GCCCAGCGCT ATTTTAGCCA GTGCGTTTTC TTGGAGCTTA
TTACCGGGGC GTTGGAAGCA GCGTTTGCCC GAAGTTTATC AAGAGTTGAT GCTTATTCCT
GTGATTATCT TTGTGGGTTG GTTCTGCTTT GCTATCAGCC CCACGGTCGA GCTTGCCTTG
TTTGGCGGCG ATACCCGTCA ATTTATTACC AATGAGCTCG GGATCACCTT CGATCAACGT
AACGCCTTAG TGGTGGGAAT TGCCATGGGT TTTGCGGTGA TTCCAACCAT ATTCTCCATT
GCCGAAGATG CCATTTTCTC TGTGCCGCGT CACTTATCCA ACGGCAGTTT AGCCTTAGGT
GCGACTAACT GGCAGACGCT GACTCGGGTG GTGCTACTTA CAGCAAGTCC AGGTATTTTC
TCTGCCATCA TGATGGGCCT TGGCCGCGCA GTGGGGGAGA CCATGATAGT ACTGATGGCA
ACCGGTAACA CGGCCATCTT AGAGTGGAGT GTGTTCGAGG GCATGCGTAC CTTAGCGGCT
AATATCGCGG TAGAAATGCC TGAGTCGGCC ATTGGCAGCT CCCATTATCG GGTCTTGTTC
CTCGCGGCCT TTGTTTTGTT TATTTTCACC TTCTTCTTTA ACACCATAGC CGAAGTTGTC
CGTCAACGAT TGAGAGAGCG TTATAGCTCG CTGTAA
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| Protein sequence | MESQVSQPAS AASKILGGSK AKSRAFKDKA AQVGVTIGGT LVFVALLLIF FYLLYVIKPI
FDGADIRPLS KISLIDTQTP SLMIGTDEQN EIAFRVLMDG QVEFYSVASG QLLSSQIPLL
SEGETVTSSA KSSPNEQRFA LGLSSGKVLV VDVDFAVTYP DNQRLITPRL RYPNGETPLN
LSTNSAVYNL AFDYSDSRMS FAYQDKDGQW RFNRQEGEEN MMTEEVEWSS TESIIADAPA
NKTHALVTPD HSQLILPGTD KIFVYNTRDA DAIDLLQVID VRNGQDTVSQ VSLLAGASSI
LVSYHSGLVA QYFQVNSDSG RLYQRIRQFD ELAPMSAIAT EFYRKSFAVV SKEGELSLLY
TTSERKLFEQ KMALQSPSNM AFSPRSNALI IETNQVLSLF AVDNSHPEVS WSAMWEKVWY
EGYPEPKYVW QSTSGSDDFE AKLSLMPLAF GTMKAAFYAM LFAVPLAVAG AIYTAYFMSP
KVRSIVKPTI EIMEALPTVI LGFLAGLWLA PLIEDHLPGI FMLLVLLPSA ILASAFSWSL
LPGRWKQRLP EVYQELMLIP VIIFVGWFCF AISPTVELAL FGGDTRQFIT NELGITFDQR
NALVVGIAMG FAVIPTIFSI AEDAIFSVPR HLSNGSLALG ATNWQTLTRV VLLTASPGIF
SAIMMGLGRA VGETMIVLMA TGNTAILEWS VFEGMRTLAA NIAVEMPESA IGSSHYRVLF
LAAFVLFIFT FFFNTIAEVV RQRLRERYSS L
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