More than 300 homologs were found in PanDaTox collection
for query gene PC1_2944 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012917  PC1_2944  binding-protein-dependent transport systems inner membrane component  100 
 
 
722 aa  1454    Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1237  binding-protein-dependent transport systems inner membrane component  61.45 
 
 
743 aa  793    Dickeya zeae Ech1591  Bacteria  normal  0.0916528  n/a   
 
 
-
 
NC_012880  Dd703_2671  binding-protein-dependent transport systems inner membrane component  62.6 
 
 
718 aa  810    Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1345  binding-protein-dependent transport systems inner membrane component  53.52 
 
 
719 aa  654    Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1228  phosphate ABC transporter, permease protein PstC  53.72 
 
 
743 aa  672    Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3540  binding-protein-dependent transport systems inner membrane component  52.14 
 
 
724 aa  692    Serratia proteamaculans 568  Bacteria  normal  0.875094  normal 
 
 
-
 
NC_013421  Pecwa_1334  binding-protein-dependent transport systems inner membrane component  91.96 
 
 
722 aa  1312    Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1698  binding-protein-dependent transport systems inner membrane component  42.35 
 
 
752 aa  513  1e-144  Shewanella loihica PV-4  Bacteria  normal  normal  0.719566 
 
 
-
 
NC_011312  VSAL_I2454  phosphate import protein, transmembrane component PstC  39.95 
 
 
735 aa  502  1e-140  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.530002  n/a   
 
 
-
 
NC_009656  PSPA7_6147  membrane protein component of ABC phosphate transporter  40.98 
 
 
761 aa  495  9.999999999999999e-139  Pseudomonas aeruginosa PA7  Bacteria  normal  0.297705  n/a   
 
 
-
 
NC_013456  VEA_004380  phosphate transport system permease protein PstC  40.41 
 
 
734 aa  479  1e-134  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01031  hypothetical protein  41.42 
 
 
734 aa  482  1e-134  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_4416  binding-protein-dependent transport systems inner membrane component  38.08 
 
 
755 aa  477  1e-133  Marinomonas sp. MWYL1  Bacteria  normal  0.383824  normal 
 
 
-
 
NC_004347  SO_1723  phosphate ABC transporter, permease protein, putative  40.68 
 
 
738 aa  474  1e-132  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008345  Sfri_1357  binding-protein-dependent transport systems inner membrane component  40.77 
 
 
751 aa  474  1e-132  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2734  binding-protein-dependent transport systems inner membrane component  41.2 
 
 
752 aa  473  1e-132  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_3642  phosphate ABC transporter, permease protein  36.26 
 
 
778 aa  470  1.0000000000000001e-131  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_5040  binding-protein dependent transport system inner membrane protein  40.82 
 
 
753 aa  469  1.0000000000000001e-131  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.921779 
 
 
-
 
NC_007484  Noc_2398  ABC transporter, inner membrane subunit  39.56 
 
 
761 aa  466  9.999999999999999e-131  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.220176  n/a   
 
 
-
 
NC_009438  Sputcn32_1434  binding-protein-dependent transport systems inner membrane component  39.68 
 
 
752 aa  467  9.999999999999999e-131  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_0180  binding-protein-dependent transport systems inner membrane component  41.14 
 
 
761 aa  467  9.999999999999999e-131  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_1408  phosphate ABC transporter, permease protein, putative  39.57 
 
 
751 aa  462  1e-129  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0601702 
 
 
-
 
NC_012560  Avin_48590  Phosphate ABC-transporter, permease protein PstC  40.29 
 
 
762 aa  465  1e-129  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3168  binding-protein-dependent transport systems inner membrane component  41.6 
 
 
752 aa  462  9.999999999999999e-129  Shewanella woodyi ATCC 51908  Bacteria  normal  0.618473  normal 
 
 
-
 
NC_011663  Sbal223_2818  binding-protein-dependent transport systems inner membrane component  41.36 
 
 
752 aa  459  9.999999999999999e-129  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_5614  binding-protein dependent transport system inner membrane protein  39.15 
 
 
760 aa  461  9.999999999999999e-129  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.536938  normal  0.133836 
 
 
-
 
NC_009665  Shew185_1533  binding-protein-dependent transport systems inner membrane component  41.22 
 
 
752 aa  459  9.999999999999999e-129  Shewanella baltica OS185  Bacteria  normal  0.0241057  n/a   
 
 
-
 
NC_007954  Sden_2584  binding-protein-dependent transport systems inner membrane component  41.09 
 
 
751 aa  459  9.999999999999999e-129  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_2560  binding-protein-dependent transport systems inner membrane component  41.2 
 
 
752 aa  459  9.999999999999999e-129  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_1538  binding-protein-dependent transport systems inner membrane component  41.22 
 
 
752 aa  459  9.999999999999999e-129  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_2745  binding-protein-dependent transport systems inner membrane component  39.67 
 
 
751 aa  458  1e-127  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_5236  binding-protein-dependent transport systems inner membrane component  38.79 
 
 
762 aa  458  1e-127  Pseudomonas putida F1  Bacteria  normal  0.644471  normal  0.245739 
 
 
-
 
NC_008322  Shewmr7_2627  binding-protein-dependent transport systems inner membrane component  41.17 
 
 
752 aa  458  1e-127  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_1566  binding-protein-dependent transport systems inner membrane component  41.22 
 
 
752 aa  455  1.0000000000000001e-126  Shewanella baltica OS195  Bacteria  normal  0.637323  normal  0.18855 
 
 
-
 
NC_008463  PA14_70850  membrane protein component of ABC phosphate transporter  40.42 
 
 
677 aa  455  1.0000000000000001e-126  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.721295 
 
 
-
 
NC_010322  PputGB1_5375  binding-protein-dependent transport systems inner membrane component  38.66 
 
 
762 aa  452  1.0000000000000001e-126  Pseudomonas putida GB-1  Bacteria  normal  normal  0.690335 
 
 
-
 
NC_010501  PputW619_0146  binding-protein-dependent transport systems inner membrane component  38.66 
 
 
762 aa  452  1e-125  Pseudomonas putida W619  Bacteria  normal  0.212947  normal 
 
 
-
 
NC_009831  Ssed_1501  binding-protein-dependent transport systems inner membrane component  40.6 
 
 
752 aa  444  1e-123  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000210465  normal 
 
 
-
 
NC_007520  Tcr_0537  binding-protein dependent transport system inner membrane protein  37.01 
 
 
755 aa  443  1e-123  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0258  phosphate ABC transporter, permease protein  39.81 
 
 
731 aa  436  1e-121  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0956  binding-protein-dependent transport systems inner membrane component  36.42 
 
 
756 aa  428  1e-118  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.137711  normal  0.159136 
 
 
-
 
NC_008789  Hhal_0095  binding-protein-dependent transport systems inner membrane component  37.45 
 
 
775 aa  426  1e-118  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_5328  binding-protein-dependent transport systems inner membrane component  38.61 
 
 
669 aa  419  1e-116  Pseudomonas putida KT2440  Bacteria  normal  0.662544  hitchhiker  0.00483454 
 
 
-
 
NC_004578  PSPTO_5486  phosphate ABC transporter, permease protein, putative  39.2 
 
 
677 aa  420  1e-116  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1135  binding-protein-dependent transport systems inner membrane component  38.45 
 
 
771 aa  417  9.999999999999999e-116  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.975413 
 
 
-
 
NC_011901  Tgr7_2652  binding-protein-dependent transport systems inner membrane component  38.35 
 
 
765 aa  403  1e-111  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0619  binding-protein-dependent transport systems inner membrane component  41.64 
 
 
641 aa  372  1e-101  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3158  binding-protein-dependent transport systems inner membrane component  42.67 
 
 
742 aa  363  5.0000000000000005e-99  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010655  Amuc_1305  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
784 aa  339  9.999999999999999e-92  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal  0.462831 
 
 
-
 
NC_007963  Csal_3267  binding-protein-dependent transport systems inner membrane component  37.26 
 
 
706 aa  337  3.9999999999999995e-91  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0656  ABC-type phosphate transport system, permease component  41.59 
 
 
742 aa  336  7e-91  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.770286  n/a   
 
 
-
 
NC_011138  MADE_03151  putative phosphate ABC transporter, permease protein  35.56 
 
 
727 aa  288  2e-76  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_4079  phosphate ABC transporter, inner membrane subunit PstC  30.38 
 
 
357 aa  150  8e-35  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4147  phosphate ABC transporter, inner membrane subunit PstC  33.96 
 
 
336 aa  149  2.0000000000000003e-34  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_4121  phosphate ABC transporter, inner membrane subunit PstC  34.16 
 
 
336 aa  149  2.0000000000000003e-34  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_2546  phosphate ABC transporter, inner membrane subunit PstC  34.3 
 
 
535 aa  149  2.0000000000000003e-34  Opitutus terrae PB90-1  Bacteria  normal  normal  0.153415 
 
 
-
 
NC_007760  Adeh_4005  phosphate ABC transporter inner membrane protein  34.16 
 
 
336 aa  147  5e-34  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.475796  n/a   
 
 
-
 
NC_009675  Anae109_0419  phosphate ABC transporter, inner membrane subunit PstC  42.23 
 
 
325 aa  146  2e-33  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.730812 
 
 
-
 
NC_007512  Plut_1244  phosphate ABC transporter permease  34.6 
 
 
387 aa  144  4e-33  Chlorobium luteolum DSM 273  Bacteria  normal  0.81986  normal  0.80225 
 
 
-
 
NC_007955  Mbur_0751  phosphate ABC transporter inner membrane protein  47.65 
 
 
297 aa  142  1.9999999999999998e-32  Methanococcoides burtonii DSM 6242  Archaea  normal  0.0108561  n/a   
 
 
-
 
NC_011899  Hore_21570  phosphate ABC transporter, inner membrane subunit PstC  38.32 
 
 
291 aa  139  2e-31  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A1779  phosphate ABC transporter, permease protein  44.37 
 
 
296 aa  135  3e-30  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_011883  Ddes_0565  phosphate ABC transporter, inner membrane subunit PstC  39.47 
 
 
296 aa  134  7.999999999999999e-30  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.0134721  n/a   
 
 
-
 
NC_013202  Hmuk_0356  phosphate ABC transporter, inner membrane subunit PstC  27.74 
 
 
350 aa  133  1.0000000000000001e-29  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.0241985  normal  0.511021 
 
 
-
 
NC_011899  Hore_21615  phosphate ABC transporter, permease protein PstA  46.26 
 
 
318 aa  132  2.0000000000000002e-29  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_1681  phosphate ABC transporter, inner membrane subunit PstC  33.54 
 
 
387 aa  132  2.0000000000000002e-29  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.091837  n/a   
 
 
-
 
NC_010831  Cphamn1_1234  phosphate ABC transporter, inner membrane subunit PstC  33.75 
 
 
387 aa  132  3e-29  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal  0.352319 
 
 
-
 
NC_011059  Paes_0944  phosphate ABC transporter, inner membrane subunit PstC  33.75 
 
 
387 aa  132  3e-29  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal  0.502812 
 
 
-
 
NC_008639  Cpha266_1039  phosphate ABC transporter, inner membrane subunit PstC  33.23 
 
 
387 aa  129  2.0000000000000002e-28  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.0327987  n/a   
 
 
-
 
NC_008554  Sfum_0704  phosphate ABC transporter, inner membrane subunit PstC  34.98 
 
 
303 aa  129  3e-28  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009637  MmarC7_0348  phosphate ABC transporter, inner membrane subunit PstC  33.18 
 
 
291 aa  128  4.0000000000000003e-28  Methanococcus maripaludis C7  Archaea  normal  hitchhiker  0.0000428257 
 
 
-
 
NC_009135  MmarC5_0488  phosphate ABC transporter, inner membrane subunit PstC  33.18 
 
 
291 aa  128  5e-28  Methanococcus maripaludis C5  Archaea  normal  0.456942  n/a   
 
 
-
 
NC_008554  Sfum_2887  phosphate ABC transporter, inner membrane subunit PstC  35.5 
 
 
297 aa  127  6e-28  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.110489 
 
 
-
 
NC_009975  MmarC6_1571  phosphate ABC transporter, inner membrane subunit PstC  33.18 
 
 
291 aa  127  8.000000000000001e-28  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_007519  Dde_1061  phosphate ABC transporter permease  36.84 
 
 
298 aa  127  9e-28  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_1619  phosphate ABC transporter, inner membrane subunit PstC  32.38 
 
 
388 aa  127  9e-28  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0764  phosphate ABC transporter, inner membrane subunit PstC  35.32 
 
 
297 aa  126  1e-27  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.316 
 
 
-
 
NC_009634  Mevan_0421  phosphate ABC transporter, inner membrane subunit PstC  32.24 
 
 
290 aa  121  3.9999999999999996e-26  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_012034  Athe_1162  phosphate ABC transporter, inner membrane subunit PstC  42.18 
 
 
284 aa  121  6e-26  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1926  phosphate ABC transporter, inner membrane subunit PstC  34.11 
 
 
309 aa  120  7e-26  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0478834  n/a   
 
 
-
 
NC_013922  Nmag_2359  phosphate ABC transporter, inner membrane subunit PstC  26.84 
 
 
358 aa  120  9e-26  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_009635  Maeo_0570  phosphate ABC transporter, inner membrane subunit PstC  34.25 
 
 
292 aa  120  9.999999999999999e-26  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_008255  CHU_3819  phosphate ABC transporter, permease component  30.6 
 
 
295 aa  119  1.9999999999999998e-25  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.37684 
 
 
-
 
NC_009487  SaurJH9_1449  phosphate ABC transporter, inner membrane subunit PstC  27.52 
 
 
308 aa  118  3.9999999999999997e-25  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2519  phosphate ABC transporter inner membrane subunit PstC  30.55 
 
 
328 aa  118  3.9999999999999997e-25  Meiothermus ruber DSM 1279  Bacteria  normal  0.947329  normal  0.39229 
 
 
-
 
NC_009632  SaurJH1_1478  phosphate ABC transporter, inner membrane subunit PstC  27.52 
 
 
308 aa  118  3.9999999999999997e-25  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.0682584  n/a   
 
 
-
 
NC_014148  Plim_1489  phosphate ABC transporter, inner membrane subunit PstC  29.93 
 
 
343 aa  117  5e-25  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.111462  n/a   
 
 
-
 
NC_010718  Nther_0980  phosphate ABC transporter, inner membrane subunit PstC  37.19 
 
 
303 aa  117  5e-25  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.120988 
 
 
-
 
NC_009253  Dred_2105  phosphate ABC transporter, inner membrane subunit PstC  42.86 
 
 
283 aa  117  6e-25  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_0481  phosphate ABC transporter, inner membrane subunit PstC  37.44 
 
 
645 aa  117  6.9999999999999995e-25  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_011830  Dhaf_1250  phosphate ABC transporter, inner membrane subunit PstC  31.91 
 
 
306 aa  114  5e-24  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.125763  n/a   
 
 
-
 
NC_011729  PCC7424_2810  phosphate ABC transporter, inner membrane subunit PstC  32.79 
 
 
327 aa  114  6e-24  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.107493 
 
 
-
 
NC_007604  Synpcc7942_2443  phosphate ABC transporter permease  31.47 
 
 
310 aa  114  7.000000000000001e-24  Synechococcus elongatus PCC 7942  Bacteria  normal  hitchhiker  0.00687312 
 
 
-
 
NC_009051  Memar_2277  phosphate ABC transporter, inner membrane subunit PstC  43.64 
 
 
646 aa  114  8.000000000000001e-24  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_013743  Htur_2479  phosphate ABC transporter, inner membrane subunit PstC  31.91 
 
 
307 aa  113  1.0000000000000001e-23  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013501  Rmar_1828  phosphate ABC transporter, inner membrane subunit PstC  31.6 
 
 
314 aa  113  1.0000000000000001e-23  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_0479  phosphate ABC transporter, inner membrane subunit PstC  31.87 
 
 
566 aa  113  1.0000000000000001e-23  Maricaulis maris MCS10  Bacteria  normal  0.414974  normal 
 
 
-
 
NC_008553  Mthe_0705  phosphate ABC transporter, inner membrane subunit PstC  35.29 
 
 
301 aa  113  1.0000000000000001e-23  Methanosaeta thermophila PT  Archaea  normal  0.0779351  n/a   
 
 
-
 
NC_008942  Mlab_1117  hypothetical protein  28.33 
 
 
627 aa  111  4.0000000000000004e-23  Methanocorpusculum labreanum Z  Archaea  normal  normal 
 
 
-
 
NC_007796  Mhun_2982  phosphate ABC transporter permease  44.67 
 
 
649 aa  110  1e-22  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
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