| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1305 |
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| Symbol | |
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| ID | 6275435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1582292 |
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| End bp | 1584646 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642613361 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001877910 |
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| Protein GI | 187735798 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4590] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.462831 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCCA ATGCTCCCTC CCCCGCACCT TCCAGAAAGC CCAAACCCGT TCCGGAACGC
TTTCAGGTGG CAAAAACCAC GCTGTGGTTT GACCGCATCA TGACCAAAAC CATCATCGGC
GGAGGATTCA CCGTCATTGT AGCCGTTTTC GGCATTCTTT TCTTCCTGCT GGCCGTTACG
ATTCCTCTCT TCCAGAGCGC GGACGTGGAA GAACGGCAGC ACCCCGCGCC CTCCTCTCCG
GTTCCGGGAA CCTGGGGCCT GGACCCTTCC GGCACGCTTC CCTTTGTCTA CGGCAACGGG
AAAAACATCT TCTTCCTGGA CAAAACTACC GGGAACCTGT CCTCCGTTCC CGTTTCCCTG
CCGGACGGCG AAACCGTCTG CGCCCATTCC TATGATGCAT CCCTCACCGC CTACCCCATC
GCCACGGAAT CCGGCAAGGT GGGCCTCATC CATGTTCATT CCGGACTCAA CGTCCACGGC
CGGACGAATG CCCACGGCCC GGACAAAGCC GGAGCGGAGG CCGGCCCTCT CTACCCCCTG
ACGGAAAGCG GCTCCGTCCC CGGCAAAATA TCCGGCATAG CCTATGCGGA CGCGGGAGAA
CGGAAAATAT TTACCGCAAC CGTGGAGACA GAACAGGGCA CGCGCCTCCT GCTGATGACG
CTGGAAGAAT CCCGCTCCCT GCTTCATGAG GGAGAACTGG CGCCTTCCGG ATTCCATGAC
CTGACGGACC AGCTGGAAGG CCGCCCCACG GCCATGCTAC CCGGAGCCTC CGGAGACAGC
CTCGTCATCG CTACGGATGC GGACAAACTT CTTTACTTCT CCTATGATGA AGACGGGGAA
ACATGGGTCA GACGCCAGAT GATTCCGACC CCGCTGGGGA AAGGGGAAAA AATGACTTCC
GTCAACTGGC TTTTCGGAGA CATGTCCCTG GTCATAGGAG GCGACAGGGG AAGCCTTAAG
ATTTTCAGCC TTTATCCCCA TTCCCGCCCG GACGGCACTT CCCTGCGCCT CTTCGGCCAG
ACCAGGCAAT TCTCTCCCAT GGACGGTCCG GTGCAGCATT ACGCGGCATC CGGCATCAAC
CGTTCCTTCC TGGTCTCCAC TCCGCGGGAA CTCAGGCTCT GCTACGGAAC CACGGCCGAC
ATCCGCTGGA ACAGCGGACC TCTGGAATTC GTTCCGGTCC AACTGGCCGC CAATGCGGAA
TTCAACGCCG CCATTGCCGT GGACCCATCA GGAAACATCC ATTTCTTCTC TCTGGAAGAC
AAGCACCCGG AAGCCGGCGC CAAAGCCCTG GTCGGGAAAA TATGGTATGA GGGGTACGAT
TCTCCCAAAT GGCTCTGGCA ATCCGTGGGC GGCACGGATG ATTATGAATC CAAGCTGTCC
CTGATGCCCC TGGTCTTCGG CACGCTGAAA GGCACCCTGT ACGCCCTTGT CTTCGCCGTC
CCGGTAGCGG TCACAGCCGC CATTTACACG GCCCACTTCA TGGCCCCTGC CGTCAAACGG
GTGGTAAAAC CCGTCATGGA AATCATGGCC TCCCTTCCTT CCGTAGTGCT GGGCTTCTTC
GGCGCCCTTT ACCTGGCCCC CAGAATGGAA GACAAAGTCC CCGCACTGCT CTGCATGGCC
GTCCTCATTC CCGGCCTGGC GGCCCTCATC GCATGGTTCT GGACCACCCG GCCCGCAGCC
TGGCGCAACA AATTCAGCCG CGGTGTGGAA TACATCGTCA TGACCCCCGT CATCCTGCTC
TGCGCCTGGT TCTGCTGGGA ATACCTGGGC TACTGGCTGG AACAGCCCCT CATCAGCCTC
TGCCGCAGCG TCATGGGCCT GTGGGGAGAC GGGGACTTCC AGGCCGCCAG TTTCGCAGAC
CTGTGGCGCA ACGGCTCCGG CATGCCCTAT GAACAGCGCA ACTCCCTAGT GGTTGGATTC
ATCATGGGCT TTGCCGTCAT CCCTGTCATC TTCACCATTT CCGAGGACGC CCTGAGCAAC
GTCCCCCCTT CCCTCATCGC CGCCTCGGAG GCTCTGGGGG CCAGCCGCTG GCAGATGGTC
CGCACCGTTG TTCTTCCGGT GGCTTCCGCA GGCATTTTCT CCGCCCTGAT GATAGGTCTG
GGCCGAGCCG TGGGGGAAAC CATGATCGTA CTGATGGCCA CGGGAAACAC CCCCATCATG
GACTGGAATA TCTTCAACGG CATGCGCACC CTCTCCGCCA ACATCGCCAC GGAACTGCCG
GAGGCGGCGC AGGACTCCAC CCACTACCGG GTCCTCTTCC TGGGCGGCCT TATCCTCTTC
TCCATGACAT TCATTCTGAA CACTCTGGCG GAAATAGTGC GCCAGCGTCT CCGCAAACGC
TTCAACGTCG TGTGA
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| Protein sequence | MSSNAPSPAP SRKPKPVPER FQVAKTTLWF DRIMTKTIIG GGFTVIVAVF GILFFLLAVT
IPLFQSADVE ERQHPAPSSP VPGTWGLDPS GTLPFVYGNG KNIFFLDKTT GNLSSVPVSL
PDGETVCAHS YDASLTAYPI ATESGKVGLI HVHSGLNVHG RTNAHGPDKA GAEAGPLYPL
TESGSVPGKI SGIAYADAGE RKIFTATVET EQGTRLLLMT LEESRSLLHE GELAPSGFHD
LTDQLEGRPT AMLPGASGDS LVIATDADKL LYFSYDEDGE TWVRRQMIPT PLGKGEKMTS
VNWLFGDMSL VIGGDRGSLK IFSLYPHSRP DGTSLRLFGQ TRQFSPMDGP VQHYAASGIN
RSFLVSTPRE LRLCYGTTAD IRWNSGPLEF VPVQLAANAE FNAAIAVDPS GNIHFFSLED
KHPEAGAKAL VGKIWYEGYD SPKWLWQSVG GTDDYESKLS LMPLVFGTLK GTLYALVFAV
PVAVTAAIYT AHFMAPAVKR VVKPVMEIMA SLPSVVLGFF GALYLAPRME DKVPALLCMA
VLIPGLAALI AWFWTTRPAA WRNKFSRGVE YIVMTPVILL CAWFCWEYLG YWLEQPLISL
CRSVMGLWGD GDFQAASFAD LWRNGSGMPY EQRNSLVVGF IMGFAVIPVI FTISEDALSN
VPPSLIAASE ALGASRWQMV RTVVLPVASA GIFSALMIGL GRAVGETMIV LMATGNTPIM
DWNIFNGMRT LSANIATELP EAAQDSTHYR VLFLGGLILF SMTFILNTLA EIVRQRLRKR
FNVV
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