| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2105 |
|---|
| Symbol | |
|---|
| ID | 4956022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 2303658 |
|---|
| End bp | 2304509 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640181275 |
|---|
| Product | phosphate ABC transporter, inner membrane subunit PstC |
|---|
| Protein accession | YP_001113447 |
|---|
| Protein GI | 134299951 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0573] ABC-type phosphate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00974] phosphate ABC transporter, permease protein PstA
[TIGR02138] phosphate ABC transporter, permease protein PstC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA TACATGAGAC CATTATTGAA AAATCACTAT TCCTAAGCGC TGCGGTAGCG
GTCCTTGTGG TTGCACTAAT CACTTATTTT ATATTTGCAG ATGGATTTCC CGTTATGAGT
AAGTATGGAA TTGCACATTT TATCACGGGG ACAGACTGGC ATCCTCTGGA TAGTAAGTTT
GGTTTGTTTC CAATGATTGT AGGTTCCTTT ATGGTTACCA TTGGTGCATT AATCATAGGA
GTTCCTCTAA GCGTGGGATG CGCAATTTTT TTAGCTGAAA TTGCTCCTAA GCAAATGACT
CGAATTGTTC GGCCCGCCAT TGAGTTGCTG GCAGGTATTC CATCGGTAGT TTATGGTTTT
TATGGACTAG TAATTTTAGT TCCCTTCATT AGAGAAATCT TTGGTGGTAG AGGGTTCAGT
ATTATTGGCG GCTCCGTTGT GCTTGCCATC ATGATTCTCC CCACCATTGT AAATATATCT
GAGGATGCCA TACGGTCAGT CCCCAAGGAA TACAAGGAAG GTTCCTTAGC TTTGGGGGCT
ACCCATTGGC AGACGATTAA AAAGGTAATT GTACCCAGTG CCAGTTCAGG TATTCTAACT
GGCGTGGTTC TAGGGATGGG TAGGGCCATT GGTGAAACAA TGGCGGTTAT TATGGTGGTT
GGTAATGTTG CTACTATACC CGAAAGCATT CTCGATCCTA TTCGTACCCT AACTGGTAAT
ATTGCTATTG AAATGGGCTA TGCTGCCGGT GAACATTCCC AGGCATTGTT TGCAACAGGT
ATTGTTCTTT TTGTTATTAT CATGTTTTTA AACTTTATGG TAACAATGGT GCCTAAAAGG
GTGGGTGAAT AA
|
|---|
| Protein sequence | MKKIHETIIE KSLFLSAAVA VLVVALITYF IFADGFPVMS KYGIAHFITG TDWHPLDSKF
GLFPMIVGSF MVTIGALIIG VPLSVGCAIF LAEIAPKQMT RIVRPAIELL AGIPSVVYGF
YGLVILVPFI REIFGGRGFS IIGGSVVLAI MILPTIVNIS EDAIRSVPKE YKEGSLALGA
THWQTIKKVI VPSASSGILT GVVLGMGRAI GETMAVIMVV GNVATIPESI LDPIRTLTGN
IAIEMGYAAG EHSQALFATG IVLFVIIMFL NFMVTMVPKR VGE
|
|---|
| |