More than 300 homologs were found in PanDaTox collection
for query gene PputGB1_5375 on replicon NC_010322
Organism: Pseudomonas putida GB-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013889  TK90_0956  binding-protein-dependent transport systems inner membrane component  48.42 
 
 
756 aa  674    Thioalkalivibrio sp. K90mix  Bacteria  normal  0.137711  normal  0.159136 
 
 
-
 
NC_002947  PP_5328  binding-protein-dependent transport systems inner membrane component  97.61 
 
 
669 aa  1271    Pseudomonas putida KT2440  Bacteria  normal  0.662544  hitchhiker  0.00483454 
 
 
-
 
NC_009438  Sputcn32_1434  binding-protein-dependent transport systems inner membrane component  48.88 
 
 
752 aa  661    Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2818  binding-protein-dependent transport systems inner membrane component  49.6 
 
 
752 aa  638    Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_48590  Phosphate ABC-transporter, permease protein PstC  70.29 
 
 
762 aa  1035    Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1723  phosphate ABC transporter, permease protein, putative  48.99 
 
 
738 aa  657    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_5486  phosphate ABC transporter, permease protein, putative  79.88 
 
 
677 aa  1090    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_5040  binding-protein dependent transport system inner membrane protein  78.78 
 
 
753 aa  1192    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.921779 
 
 
-
 
NC_007484  Noc_2398  ABC transporter, inner membrane subunit  52.58 
 
 
761 aa  767    Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.220176  n/a   
 
 
-
 
NC_007492  Pfl01_5614  binding-protein dependent transport system inner membrane protein  82.28 
 
 
760 aa  1248    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.536938  normal  0.133836 
 
 
-
 
NC_007520  Tcr_0537  binding-protein dependent transport system inner membrane protein  45.04 
 
 
755 aa  665    Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_1533  binding-protein-dependent transport systems inner membrane component  49.74 
 
 
752 aa  639    Shewanella baltica OS185  Bacteria  normal  0.0241057  n/a   
 
 
-
 
NC_009654  Mmwyl1_4416  binding-protein-dependent transport systems inner membrane component  50.46 
 
 
755 aa  753    Marinomonas sp. MWYL1  Bacteria  normal  0.383824  normal 
 
 
-
 
NC_010501  PputW619_0146  binding-protein-dependent transport systems inner membrane component  96.59 
 
 
762 aa  1448    Pseudomonas putida W619  Bacteria  normal  0.212947  normal 
 
 
-
 
NC_010322  PputGB1_5375  binding-protein-dependent transport systems inner membrane component  100 
 
 
762 aa  1551    Pseudomonas putida GB-1  Bacteria  normal  normal  0.690335 
 
 
-
 
NC_009512  Pput_5236  binding-protein-dependent transport systems inner membrane component  97.38 
 
 
762 aa  1456    Pseudomonas putida F1  Bacteria  normal  0.644471  normal  0.245739 
 
 
-
 
NC_010506  Swoo_3168  binding-protein-dependent transport systems inner membrane component  50.41 
 
 
752 aa  638    Shewanella woodyi ATCC 51908  Bacteria  normal  0.618473  normal 
 
 
-
 
NC_009901  Spea_2745  binding-protein-dependent transport systems inner membrane component  49.59 
 
 
751 aa  660    Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_6147  membrane protein component of ABC phosphate transporter  75.2 
 
 
761 aa  1149    Pseudomonas aeruginosa PA7  Bacteria  normal  0.297705  n/a   
 
 
-
 
NC_008321  Shewmr4_2560  binding-protein-dependent transport systems inner membrane component  50 
 
 
752 aa  645    Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2627  binding-protein-dependent transport systems inner membrane component  49.86 
 
 
752 aa  643    Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1357  binding-protein-dependent transport systems inner membrane component  47.99 
 
 
751 aa  641    Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_70850  membrane protein component of ABC phosphate transporter  75.15 
 
 
677 aa  1019    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.721295 
 
 
-
 
NC_009052  Sbal_1538  binding-protein-dependent transport systems inner membrane component  49.74 
 
 
752 aa  639    Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2734  binding-protein-dependent transport systems inner membrane component  49.73 
 
 
752 aa  669    Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_1698  binding-protein-dependent transport systems inner membrane component  50.14 
 
 
752 aa  675    Shewanella loihica PV-4  Bacteria  normal  normal  0.719566 
 
 
-
 
NC_009439  Pmen_0180  binding-protein-dependent transport systems inner membrane component  70.47 
 
 
761 aa  1082    Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0095  binding-protein-dependent transport systems inner membrane component  47.59 
 
 
775 aa  656    Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1566  binding-protein-dependent transport systems inner membrane component  49.74 
 
 
752 aa  635  1e-180  Shewanella baltica OS195  Bacteria  normal  0.637323  normal  0.18855 
 
 
-
 
NC_009831  Ssed_1501  binding-protein-dependent transport systems inner membrane component  49.13 
 
 
752 aa  622  1e-177  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000210465  normal 
 
 
-
 
NC_008700  Sama_1408  phosphate ABC transporter, permease protein, putative  48.1 
 
 
751 aa  623  1e-177  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0601702 
 
 
-
 
NC_007954  Sden_2584  binding-protein-dependent transport systems inner membrane component  48.45 
 
 
751 aa  622  1e-176  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1135  binding-protein-dependent transport systems inner membrane component  46.84 
 
 
771 aa  617  1e-175  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.975413 
 
 
-
 
NC_011901  Tgr7_2652  binding-protein-dependent transport systems inner membrane component  46.02 
 
 
765 aa  596  1e-169  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_3642  phosphate ABC transporter, permease protein  42.49 
 
 
778 aa  595  1e-168  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I2454  phosphate import protein, transmembrane component PstC  42.16 
 
 
735 aa  540  9.999999999999999e-153  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.530002  n/a   
 
 
-
 
NC_009783  VIBHAR_01031  hypothetical protein  42.67 
 
 
734 aa  538  1e-151  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A0258  phosphate ABC transporter, permease protein  42.74 
 
 
731 aa  519  1e-146  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_004380  phosphate transport system permease protein PstC  41.4 
 
 
734 aa  511  1e-143  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1228  phosphate ABC transporter, permease protein PstC  40.31 
 
 
743 aa  491  1e-137  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1345  binding-protein-dependent transport systems inner membrane component  40.38 
 
 
719 aa  481  1e-134  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3158  binding-protein-dependent transport systems inner membrane component  37.43 
 
 
742 aa  470  1.0000000000000001e-131  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2944  binding-protein-dependent transport systems inner membrane component  38.66 
 
 
722 aa  466  9.999999999999999e-131  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3540  binding-protein-dependent transport systems inner membrane component  40.19 
 
 
724 aa  464  1e-129  Serratia proteamaculans 568  Bacteria  normal  0.875094  normal 
 
 
-
 
NC_013421  Pecwa_1334  binding-protein-dependent transport systems inner membrane component  39.3 
 
 
722 aa  464  1e-129  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0619  binding-protein-dependent transport systems inner membrane component  44.07 
 
 
641 aa  442  9.999999999999999e-123  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0656  ABC-type phosphate transport system, permease component  37.53 
 
 
742 aa  436  1e-121  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.770286  n/a   
 
 
-
 
NC_012880  Dd703_2671  binding-protein-dependent transport systems inner membrane component  40.19 
 
 
718 aa  438  1e-121  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_3267  binding-protein-dependent transport systems inner membrane component  38.93 
 
 
706 aa  425  1e-117  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1237  binding-protein-dependent transport systems inner membrane component  39.79 
 
 
743 aa  421  1e-116  Dickeya zeae Ech1591  Bacteria  normal  0.0916528  n/a   
 
 
-
 
NC_010655  Amuc_1305  binding-protein-dependent transport systems inner membrane component  35.2 
 
 
784 aa  404  1e-111  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal  0.462831 
 
 
-
 
NC_011138  MADE_03151  putative phosphate ABC transporter, permease protein  42.06 
 
 
727 aa  266  8.999999999999999e-70  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_4121  phosphate ABC transporter, inner membrane subunit PstC  32.85 
 
 
336 aa  152  2e-35  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4147  phosphate ABC transporter, inner membrane subunit PstC  32.85 
 
 
336 aa  152  2e-35  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_4005  phosphate ABC transporter inner membrane protein  32.85 
 
 
336 aa  150  7e-35  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.475796  n/a   
 
 
-
 
NC_009675  Anae109_0419  phosphate ABC transporter, inner membrane subunit PstC  38.6 
 
 
325 aa  146  1e-33  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.730812 
 
 
-
 
NC_010831  Cphamn1_1234  phosphate ABC transporter, inner membrane subunit PstC  35.56 
 
 
387 aa  142  1.9999999999999998e-32  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal  0.352319 
 
 
-
 
NC_007512  Plut_1244  phosphate ABC transporter permease  36.19 
 
 
387 aa  137  8e-31  Chlorobium luteolum DSM 273  Bacteria  normal  0.81986  normal  0.80225 
 
 
-
 
NC_011899  Hore_21615  phosphate ABC transporter, permease protein PstA  43.71 
 
 
318 aa  135  3.9999999999999996e-30  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_4079  phosphate ABC transporter, inner membrane subunit PstC  29.41 
 
 
357 aa  133  1.0000000000000001e-29  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_1681  phosphate ABC transporter, inner membrane subunit PstC  33.44 
 
 
387 aa  132  2.0000000000000002e-29  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.091837  n/a   
 
 
-
 
NC_011059  Paes_0944  phosphate ABC transporter, inner membrane subunit PstC  34.29 
 
 
387 aa  132  3e-29  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal  0.502812 
 
 
-
 
NC_010803  Clim_1619  phosphate ABC transporter, inner membrane subunit PstC  34.18 
 
 
388 aa  131  4.0000000000000003e-29  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_0356  phosphate ABC transporter, inner membrane subunit PstC  31.69 
 
 
350 aa  130  7.000000000000001e-29  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.0241985  normal  0.511021 
 
 
-
 
NC_007955  Mbur_0751  phosphate ABC transporter inner membrane protein  42.29 
 
 
297 aa  130  1.0000000000000001e-28  Methanococcoides burtonii DSM 6242  Archaea  normal  0.0108561  n/a   
 
 
-
 
NC_011899  Hore_21570  phosphate ABC transporter, inner membrane subunit PstC  44.52 
 
 
291 aa  130  1.0000000000000001e-28  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009051  Memar_2277  phosphate ABC transporter, inner membrane subunit PstC  43.82 
 
 
646 aa  126  1e-27  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_011832  Mpal_0481  phosphate ABC transporter, inner membrane subunit PstC  35.77 
 
 
645 aa  125  2e-27  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_007519  Dde_1061  phosphate ABC transporter permease  43.26 
 
 
298 aa  123  9.999999999999999e-27  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0764  phosphate ABC transporter, inner membrane subunit PstC  42.04 
 
 
297 aa  123  9.999999999999999e-27  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.316 
 
 
-
 
NC_011883  Ddes_0565  phosphate ABC transporter, inner membrane subunit PstC  34.35 
 
 
296 aa  122  1.9999999999999998e-26  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.0134721  n/a   
 
 
-
 
NC_014148  Plim_1489  phosphate ABC transporter, inner membrane subunit PstC  30.74 
 
 
343 aa  122  3e-26  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.111462  n/a   
 
 
-
 
NC_007355  Mbar_A1779  phosphate ABC transporter, permease protein  43.05 
 
 
296 aa  121  3.9999999999999996e-26  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_009943  Dole_1926  phosphate ABC transporter, inner membrane subunit PstC  43.17 
 
 
309 aa  118  3e-25  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0478834  n/a   
 
 
-
 
NC_013922  Nmag_2359  phosphate ABC transporter, inner membrane subunit PstC  29.35 
 
 
358 aa  117  1.0000000000000001e-24  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_012034  Athe_1162  phosphate ABC transporter, inner membrane subunit PstC  33.94 
 
 
284 aa  116  2.0000000000000002e-24  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1828  phosphate ABC transporter, inner membrane subunit PstC  34.02 
 
 
314 aa  115  3e-24  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_1478  phosphate ABC transporter, inner membrane subunit PstC  28.4 
 
 
308 aa  115  4.0000000000000004e-24  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.0682584  n/a   
 
 
-
 
NC_009487  SaurJH9_1449  phosphate ABC transporter, inner membrane subunit PstC  28.4 
 
 
308 aa  115  4.0000000000000004e-24  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2887  phosphate ABC transporter, inner membrane subunit PstC  31.72 
 
 
297 aa  115  4.0000000000000004e-24  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.110489 
 
 
-
 
NC_008639  Cpha266_1039  phosphate ABC transporter, inner membrane subunit PstC  31.23 
 
 
387 aa  114  6e-24  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.0327987  n/a   
 
 
-
 
NC_009634  Mevan_0421  phosphate ABC transporter, inner membrane subunit PstC  34.64 
 
 
290 aa  114  1.0000000000000001e-23  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0348  phosphate ABC transporter, inner membrane subunit PstC  37.43 
 
 
291 aa  113  1.0000000000000001e-23  Methanococcus maripaludis C7  Archaea  normal  hitchhiker  0.0000428257 
 
 
-
 
NC_009635  Maeo_0570  phosphate ABC transporter, inner membrane subunit PstC  39.73 
 
 
292 aa  114  1.0000000000000001e-23  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0379  phosphate ABC transporter, inner membrane subunit PstC  30.1 
 
 
308 aa  113  1.0000000000000001e-23  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0704  phosphate ABC transporter, inner membrane subunit PstC  43.66 
 
 
303 aa  113  1.0000000000000001e-23  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_3120  phosphate ABC transporter, inner membrane subunit PstC  33.19 
 
 
456 aa  112  2.0000000000000002e-23  Chelativorans sp. BNC1  Bacteria  normal  0.43315  n/a   
 
 
-
 
NC_009135  MmarC5_0488  phosphate ABC transporter, inner membrane subunit PstC  37.43 
 
 
291 aa  112  2.0000000000000002e-23  Methanococcus maripaludis C5  Archaea  normal  0.456942  n/a   
 
 
-
 
NC_009975  MmarC6_1571  phosphate ABC transporter, inner membrane subunit PstC  37.43 
 
 
291 aa  112  3e-23  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_007796  Mhun_2982  phosphate ABC transporter permease  40.68 
 
 
649 aa  111  4.0000000000000004e-23  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_009253  Dred_2105  phosphate ABC transporter, inner membrane subunit PstC  36.67 
 
 
283 aa  110  7.000000000000001e-23  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_2546  phosphate ABC transporter, inner membrane subunit PstC  33.6 
 
 
535 aa  110  1e-22  Opitutus terrae PB90-1  Bacteria  normal  normal  0.153415 
 
 
-
 
NC_003909  BCE_4351  phosphate ABC transporter, permease protein  33.04 
 
 
316 aa  109  2e-22  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_0980  phosphate ABC transporter, inner membrane subunit PstC  32.79 
 
 
303 aa  108  4e-22  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.120988 
 
 
-
 
NC_011772  BCG9842_B0849  phosphate ABC transporter, permease protein  32.37 
 
 
316 aa  108  4e-22  Bacillus cereus G9842  Bacteria  normal  0.68749  normal 
 
 
-
 
NC_005945  BAS4173  phosphate ABC transporter permease  33.48 
 
 
316 aa  107  6e-22  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4495  phosphate ABC transporter permease  33.48 
 
 
316 aa  107  6e-22  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_1920  phosphate ABC transporter, inner membrane subunit PstC  31.3 
 
 
480 aa  107  7e-22  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.71778  normal  0.886394 
 
 
-
 
NC_005957  BT9727_4011  phosphate ABC transporter, permease  33.04 
 
 
316 aa  106  1e-21  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4291  phosphate ABC transporter, permease protein  33.04 
 
 
316 aa  107  1e-21  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00236226 
 
 
-
 
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