| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_1920 |
|---|
| Symbol | |
|---|
| ID | 5084045 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 1963579 |
|---|
| End bp | 1965021 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640483482 |
|---|
| Product | phosphate ABC transporter, inner membrane subunit PstC |
|---|
| Protein accession | YP_001168116 |
|---|
| Protein GI | 146277957 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0573] ABC-type phosphate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR02138] phosphate ABC transporter, permease protein PstC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.71778 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.886394 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTCG GCATCCTCGT TCTGGCCGTT CTGATCCTCG CCGCCGCAGG CTTTCTCGCC
GGGCGGCGTC GCGCCATTTC CTCGGCGGGC GGCGATCCCC GTCGGCTGCA TTCCCTGCCC
GGCCACTACG GCCAGTTCGC CGCGCTGCTG ACCGCGGTGC CCGCTCTCGC GCTGCTGGCG
GTCTGGCTCA TGGCACAGCC CATGGTCATC GAGCAGCGCG TCGCGTCGCT GCTGCCGGCC
GGCGACGCCA GCACCAGCAG CCTCGTGATG GCGGACGTGC GTCGCATCTC GACGGGGCTT
CAGCGGCTGG CCGTCACCGA CGGCCTTTCG CCGCGCGACG TGGCGGGCCT CAGCCCCGAG
GGTCTCGCCC CGCGCCTGCG GGCCGTGGGT GTGGCCGTGA CCAGCATGGG CCCCGAGACG
CTGGCCGCGG CCCGCGCCCA CCGCGATCTG CAGGACAGGC TCGGCTTCTG GATGGTCGTG
TCGGTCCTTG CGACCAGCGC CGCGGGCCTC GGTCTCGCAC TCGCGCGCAT CCGCCCCGAC
TTCCGCGCCC GCAACACCAC GGAACGGTTC GTCATGGTGA TCCTGATCGC CGCCTCGCTC
GTGGCGGTGG CGACGACGGT CGGGATCGTG ATGTCGCTGC TGTTCGAGAC GATGAACTTC
TTCCGCCTCT ATCCGGCGCA GGACTTCTTC CTCAGCCTGA CCTGGAACCC GCAATTCCGC
GGCGGGTCGG ACCTCGGGAT CTGGCCGCTG CTCTGGGGCA CCATGTACAT CTCGTTCATC
GCGCTGCTGG TGGCCGTGCC GATCGGCCTT CTCACCGCGA TCTATCTTGC GGAGTATGCC
GGTGCGCGCG CCCGCAGCTG GGCCAAGCCC GCGATCGAGA TCCTCGCGGG GATCCCGACC
ATCGTCTACG GCCTCTTCGC CCTCGTCACC GTGGGCCCGG CGCTGCGCGA CTGGTTCGCC
CAGCCGCTCG GGCTCGGGGC CAGCTCGTCC TCGGTCATGA CCGCGGGTCT CGTCATGGGG
ATCATGCTGA TCCCCTTCAT CTCGTCGCTG TCCGATGACA TCATCAACGC CGTGCCGCAA
TCGCTGCGCG ACGGCTCGTA CGGGCTCGGC GCCACCCATT CCGAGACGGT CAAGCAGGTG
ATCCTGCCCG CGGCCCTGCC CGGCATCGTG GGCGCGATCC TGCTGGGCGC GAGCCGTGCC
ATCGGCGAGA CCATGATCGT CGTGCTCGGC GCGGGCGCGG CCGCCAAGCT CTCGCTGAAC
CCGTTCGAGG CCATGACCAC CGTCACGGTG AAGATCGTGA GCCAGCTCAC CGGCGACACC
GAGTTCGCCT CGCCCGAGAC GCTGGTGGCC TTCGCGCTCG GCCTCACGCT CTTCGCGATC
ACCCTCGTTC TCAACGTGAT CGCCCTCTTC ATCGTGCGCA AATACCGGGA GCAGTACGAA
TGA
|
|---|
| Protein sequence | MSLGILVLAV LILAAAGFLA GRRRAISSAG GDPRRLHSLP GHYGQFAALL TAVPALALLA
VWLMAQPMVI EQRVASLLPA GDASTSSLVM ADVRRISTGL QRLAVTDGLS PRDVAGLSPE
GLAPRLRAVG VAVTSMGPET LAAARAHRDL QDRLGFWMVV SVLATSAAGL GLALARIRPD
FRARNTTERF VMVILIAASL VAVATTVGIV MSLLFETMNF FRLYPAQDFF LSLTWNPQFR
GGSDLGIWPL LWGTMYISFI ALLVAVPIGL LTAIYLAEYA GARARSWAKP AIEILAGIPT
IVYGLFALVT VGPALRDWFA QPLGLGASSS SVMTAGLVMG IMLIPFISSL SDDIINAVPQ
SLRDGSYGLG ATHSETVKQV ILPAALPGIV GAILLGASRA IGETMIVVLG AGAAAKLSLN
PFEAMTTVTV KIVSQLTGDT EFASPETLVA FALGLTLFAI TLVLNVIALF IVRKYREQYE
|
|---|
| |