Gene Clim_1619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1619 
Symbol 
ID6355805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand- 
Start bp1752814 
End bp1753980 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content53% 
IMG OID642669220 
Productphosphate ABC transporter, inner membrane subunit PstC 
Protein accessionYP_001943642 
Protein GI189347113 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0573] ABC-type phosphate transport system, permease component 
TIGRFAM ID[TIGR02138] phosphate ABC transporter, permease protein PstC 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGATTG AAGATATTGT AAAGGAGAGC GGGCGTTCAG GTGCATTTAT CGTCAGCGCC 
AAAAAAAGAA AGCTCCAGAA ACTTTCCAAA ACAGCAGGGG AGTCGATTCT TCTGCTGATT 
GCGTCGTTCG TTGCGATTGT CGTACTCTTT ATTTTCTATT TCGTTGCCGT TGATGCGGTG 
CCCTACTTTC AGCTTCGGGG ATTCAGGGAG TTTTTTACCA GCAGCAACTG GTATCCTGCC 
GATGAGCCGG GCGAATTCGG TGCGCTGGCC ATTATCTACG GCAGCGGTAT GGTCACGCTG 
GGATCTACGC TGCTTTCGGT GCCCATGGGT ATTGCAGCGG CAATCTGCCT CAGCGATATT 
CTTCCATTTT CAGTCAGGCA GTACGCCAAA CCGGTTATCG AGATGCTTGC CGCCATTCCT 
TCGGTAGCAT TCGGCTTTTT TGCGCTTGTC ATTTTCGCCC CGCTACTCCA GACACATGGA 
GGGCCGATTC TCATGTGGGC GTGGTGGGTT CTTGCCGCAC CGTTCCTTCT TCTTGCCGTC 
ATCGTCATAT CCGATCTCCT TACCGCAAAA ATCGAAGACC AGAATCGTCG TCAGCAGATA 
TCTCTGGTAT TGCTTGCGGT TTTCGCCATC GGAGCGCTTG CCTTTCTCTA CTGGGTTGGA 
TCGGTGCTGC AGAAGATGGA AATCATTACC GGAACCAATG CACTCAACGT CTCGATCATT 
CTGAGCTTTA TGTCGCTTCC TACAATCGTG AGCGTTTCGG AAGACGCGCT GCAGGCGGTG 
GGACGGGATA TGCGCGAAGG CAGCTATGCG CTTGGGGCAA CCCGTGCCGA AACCATCGTT 
AAAACCGTGC TTCCGGCAGC CAGCAGCGGC ATTCTCGCAG CCGTCATTCT CGGTGTCATG 
AGGGCTCTCG GCGAAACCAT GGTGGTCTGG ATGGCTTCCG GCAACTCTTC TCATATTCCC 
GAACCCTGGT TCAACTATCT CGAGGCGATC AGGACCCTGA CCGCGACCAT CGCAGGCGAT 
ATGGGCGAAG CCGATCAGGT TACCGGTTCA GCCCGTTATC ATGTGCTTTT TGCCATGGGC 
CTGCTTCTTC TCGTCATCAG TTTTTTCAGC AATCTGGTAA GCGAGCGGAT CGTTGTGCGC 
CAGAGAAAGG TTTTATCTGG ACAGTAA
 
Protein sequence
MMIEDIVKES GRSGAFIVSA KKRKLQKLSK TAGESILLLI ASFVAIVVLF IFYFVAVDAV 
PYFQLRGFRE FFTSSNWYPA DEPGEFGALA IIYGSGMVTL GSTLLSVPMG IAAAICLSDI 
LPFSVRQYAK PVIEMLAAIP SVAFGFFALV IFAPLLQTHG GPILMWAWWV LAAPFLLLAV 
IVISDLLTAK IEDQNRRQQI SLVLLAVFAI GALAFLYWVG SVLQKMEIIT GTNALNVSII 
LSFMSLPTIV SVSEDALQAV GRDMREGSYA LGATRAETIV KTVLPAASSG ILAAVILGVM 
RALGETMVVW MASGNSSHIP EPWFNYLEAI RTLTATIAGD MGEADQVTGS ARYHVLFAMG 
LLLLVISFFS NLVSERIVVR QRKVLSGQ