| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2398 |
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| Symbol | |
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| ID | 3704651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2746078 |
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| End bp | 2748363 |
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| Gene Length | 2286 bp |
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| Protein Length | 761 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637738881 |
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| Product | ABC transporter, inner membrane subunit |
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| Protein accession | YP_344386 |
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| Protein GI | 77165861 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4590] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.220176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGCCA GAGATTCAGA AACCGAAGAA CAGGTGGTGC CTCCCCCCCA TTCGCCGGTG
GCCATACGCC GCCGTCGTTG GCGTAAAATC AAGGATCACT TGGCGCGCTA TTGCATTGCT
GCCGGTGGTG TTAGCGTTAT TATCGCCATC GTACTGATTT TCTTTTACCT CTTGTACGTG
GTGATCCCCC TGTTTCGTCC TGCTCAGCTA GAGCCCGTTG CCCAATATTT AGCCCCTGGG
GGCAACGTGG GGAGCACCCT TCATTTAGCC TTGAATGAAT ATAACGATAT GGGCTTACGC
TTGACTGAGC AAGGGCAGGC GGTCTTCTTC TCTACTGCAG AGGGCAAGGT GGTTTTGGAA
ACCCCACTGC CCCTTCCCAA GGAGGTGGCC GTGACTAGCT TTGCAGCCGG CGATTCCGCC
GGCAAGGTAA TCGTCTATGG TCTATCTGAT GGCCGCGCCC TGCTGGCGCG CCATGCCTAT
CGCGTCTCCT ATCCTGACAA TGTGCGTACT ATTACGCCTC GATTAGAATA CCCGCTTGAT
AAAGCCCTAT TGGCGGTGGA TTCCCAGGGG CAGCCCTTGC GCCTTATTAG CGCTCAATCC
GATGAGGATC AGACTACCAT CGCTGCAGTT ACCACAGACG GACGCTTGAT TTTAGTTAAT
TTTACCGTGC AACAGTCATT TCTCGATGAT GAAATTACTG TTGAACAGGC GACTGTCTCG
CTGGATTTGC CTCCGCCGCA AGCGACACAT TTAGTGCTGG ATGAGCAGCA AGAGGAATTA
TATGTGGCGG ACTCGGAGGG CTATATTAGT TACTATCAGC TCCGTGATAA GGAAACGCCG
CACCTAGTGC AACGGGTAAA GGCGGTTTCG GAAGATGTCC GGATAACCGC TTTGTCTTTT
CTCACGGGAG GTATTTCTCT CCTGGTAGGA GATTCCTCTG GCCGGATCGC GCAATGGTTC
CCGGTGCGCA GCGACGGCAA TCATTATACT TTAGAACAAA TTCGGATTTT CAAATCCCAG
CGGGCGCCTA TTACAGCCAT TGTCTCAGAA CATGCCAGGA AAGGCTTCTT AGCGGTAGAT
ATTTCTGGCC GGGCGGGAAT TTATCATACT ACGGCTCACC AAACGTTGCA GGTTGCAGGC
ATCAGTGAGG CTCCGCTGGT AACGGTGGCT GTTGCGCCCC GGGCCGATGG GATGTTGGCC
GGCGACTCTC AGGGTAAGAT TCATTTCTTG AAGATAGAGA ATCCGCATCC TGAGGTCTCT
TGGCAAGCGC TATGGGGGAA AGTCTGGTAT GAAAGCCGGG ATAAGCCTGA GTTTCTCTGG
CAGTCCTCAT CTGCGAGCGA TGATTTCGAG CCAAAGTTTA GCCTGACGCC ACTCACGTTT
GGTACCTTCA AGGCTGCTTT TTATGCCATG TTATTCGCTG TTCCACTGGC CATTTTAGGG
GCGCTTTATA CCGCTTATTT TATGAGCGCC AAGATGCGCG GGCTGGTCAA GCCCACCATC
GAAATCATGG AGGCCCTTCC CACGGTTATT CTCGGTTTTT TAGCGGGTCT TTGGCTGGCG
CCTTTGGTAG AGGATCATCT TCCGGGGGTC TTTGCCTTCT TGTTGTTATT GCCCGCGGGA
ATCTTTATGG CTGCTTATTT ATGGCGCCGC TTGCCTAGCT GGGTGCGCCA ATGGGTTCCT
GAGGGTTGGG AAGCCGCCTT GCTTCTTCCC GTGGTGGTGG GTCTAGGGAT TCTTGCCGCA
GTGCTAAGCC AGCCGCTGGA AGTAGCCTTG TTTAATGGCA ATATGCCCCA GTGGCTTAAC
AGCCAACTGG GGATTGCTTA TGATCAGCGT AACTCCCTCG TTGTTGGGTT TGCCATGGGA
TTTGCCGTCA TTCCGACGAT TTTCTCCATC TCCGAAGACG CTATTTTCAG TGTTCCCAAG
CAGCTCACTT TTGGTTCCTT GGCGCTGGGC GCCACGCCTT GGCAGACTCT GGTGAGGGTA
GTGCTTTTGA CCGCAAGTCC CGGTATTTTC TCTGCCGTAA TGATTGGTCT TGGCAGGGCC
GTTGGTGAGA CCATGATTGT ATTAATGGCG ACGGGCAATA CGCCCATTAT GGATTTTAAT
CTTTTCCAAG GTTTCCGCGC CTTGTCTGCA AATATTGCTG TGGAGATGCC CGAGTCCGAG
GTTGATAGTA CTCACTATCG TATTTTGTTT CTTGCCGCGT TAGTGTTATT TATGGTGACT
TTCTTTTTTA ATACTCTCGC CGAGATCGTA CGTCAGCGGC TACGAAAAAA ATACAGCAGT
TTGTAG
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| Protein sequence | MVARDSETEE QVVPPPHSPV AIRRRRWRKI KDHLARYCIA AGGVSVIIAI VLIFFYLLYV
VIPLFRPAQL EPVAQYLAPG GNVGSTLHLA LNEYNDMGLR LTEQGQAVFF STAEGKVVLE
TPLPLPKEVA VTSFAAGDSA GKVIVYGLSD GRALLARHAY RVSYPDNVRT ITPRLEYPLD
KALLAVDSQG QPLRLISAQS DEDQTTIAAV TTDGRLILVN FTVQQSFLDD EITVEQATVS
LDLPPPQATH LVLDEQQEEL YVADSEGYIS YYQLRDKETP HLVQRVKAVS EDVRITALSF
LTGGISLLVG DSSGRIAQWF PVRSDGNHYT LEQIRIFKSQ RAPITAIVSE HARKGFLAVD
ISGRAGIYHT TAHQTLQVAG ISEAPLVTVA VAPRADGMLA GDSQGKIHFL KIENPHPEVS
WQALWGKVWY ESRDKPEFLW QSSSASDDFE PKFSLTPLTF GTFKAAFYAM LFAVPLAILG
ALYTAYFMSA KMRGLVKPTI EIMEALPTVI LGFLAGLWLA PLVEDHLPGV FAFLLLLPAG
IFMAAYLWRR LPSWVRQWVP EGWEAALLLP VVVGLGILAA VLSQPLEVAL FNGNMPQWLN
SQLGIAYDQR NSLVVGFAMG FAVIPTIFSI SEDAIFSVPK QLTFGSLALG ATPWQTLVRV
VLLTASPGIF SAVMIGLGRA VGETMIVLMA TGNTPIMDFN LFQGFRALSA NIAVEMPESE
VDSTHYRILF LAALVLFMVT FFFNTLAEIV RQRLRKKYSS L
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