Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_3267 |
Symbol | |
ID | 4029016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 3641917 |
End bp | 3644037 |
Gene Length | 2121 bp |
Protein Length | 706 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637968482 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_575310 |
Protein GI | 92115382 |
COG category | [R] General function prediction only |
COG ID | [COG4590] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGACC CTTTCGTTTC TCCCCAGCGT GCCAATCGTC GCGCACGCCA GCGTCTCGAT CGCCTGGCGT CGGGCGCGAT CGCGGCCAGC GGCATCGGCG TGGTCGCGGC GGTGCTGGCC ATCGGTGTCT ATCTGACGCT GGCCGTGTTG CCGTTGTTCG AGGATGCCTC GGTCGAGGTC GATGCCGAGC CCTCGCCGGC CACGTCGGGA GCCTCCATCG TCTGGCTGGC GGAGGATGGC GAATACTGGC TGAGCGCGAA TGGACGCGTG TTCGATGCCC AGGGCGAGGT GACGACGCTG ACCGACGAGC CCCGCGTGAC GACGGCCACC GAGGCGAGCG AGACCCTGCC GCTGGCCGTG GGCCTGGACA ATGGCGAGGT GAGCGTGGTG CCGCGCGATG CCCGGGGCCA GCCACGCTGG TCGCAGGCCA CGCGCTGGCG GCTGTTTGCC TCGGCGCCGG TCGCCGCGCT GCACTTGCAG TCCACGACGC ATGGCTGGGC GCTGGCCGGA CGCGATGCGG ACGGCCAGGT GGCGGCCTTG TGGCATGACG GCGAGACGGC ACGGCGTATC GCCCTGCCGG ATCGGGCCGA ACATCTTGCC CTGGGCCGCG AGGGGCATCT GGTCATGGCC CAGGGGACAC GCTTGACCTC GTGGAAGCTG TCCCCGGACG GCAGCGTTGC GCCATCGGCA CGTGCCGAAA CGGCCGCGCC GATAACGGCC CTGGCGTTCC TGCAGGGAGA CCGCACGCTG GTCGTCGGTG ACGCCGAGGG CGGTTTGCGG CGTTGGCGGC AACGCCCGGA CGATCAAGGC TGGCAAGCGG CCGAGACGCC CTATGCCGCC CTGGGCGAGG CACCGATACG CCGGCTGCTG GCCCTGCCGC GTCAACGCCT GTGGCTGGCA CTGGATGCCG ACGGCCGGCT GGGACTCTAT CAGGCGATGA GCGGCCAGCG CTGGCAGGGC GTGGCACCCG AGGCATCGCT TCCGGTCACC CTGTCGAGCG ACGCGCGCGG TAATCGGGTG CGCTGGTTGA GCGAGACCGG ACGCCTTTAT CGGCTGGCCG TCGAGGCCCC GCACGCTGCC GTGAGCACCG CCACGCTCTG GATGCCGCAG ACGTACGAGG GCTACGCCAG CGACGAGTGG CGCTGGGCGG CGGCCGCCAG CGGCGACGCG GAGCCCAAGT ACAGCCTGGT GCCGCTGGCG TGGGGCACCC TCAAGGCGGC AGCCTGGGCG ATGGTCTTCG CGGTACCGTT GGCCTTGGGC GCGGCGGTGC ACAGTGCGTG TTACATGTCG ACGCGCCAGC GCGCACGCCT CAAGCCGGCC ATCGAGTTGA TGGAGGCCCT GCCTGGCGTG GTCATCGGGT TCGTCGCGGG CTTGCTCGTG GCCCCCTTCG TCGAGCAACA CCTTGCCGGC ACCCTGGCGC TTTTCATTTG CGTCCCGCTG GGGAGCGTGG CGTGCGGCTG GTTGTGGCGG CGTCTGCCCG CGCGCTGGGA GGCGCGTTTG CCGCCGGTGG GCGTCGGCGT GGGATTGATC GTGCCCCTGG CGCTGCTGTG CTGGGCGGCG TTGAGTGTTT CGCCCTGGCT CGAGGCCTGG TGGTTCGGCG GTGACCTGCG AGCCTGGATG CAGCAGACGC TGGGCTGGGA CTACGCGCAG CGCAATGCAC TGATCGTCGG CATGGCCATG GGACTGGCCG TCATCCCGAC GCTCTACTCG CTGGCCGAGG AGGCGCTTTC CGGCGTTCCC CGCTCGCTGG CGGAGGGATC CCTGGCGCTG GGGGCGACCC GGGCGCAGAC GTTATGGCGC GTGCAGTTGC CCGCCGCCGC GCCGGGTATT CTCGCGGCGG TGATGATCGG CGCGGGGCGT GCCGTGGGAG AAACCATGAT CGTGCTGATG GCCACCGGCA ATACGCCATT GATGTCGCCG AGTCTCTTCG AGGGGCTGCG CTCGCTGGCC GCCAATCTGG CCATCGAATT GCCCGAAGCC GCGGTGGGAG GCACGCATTA TCGCCTCTTG CTGCTCGGAG CGCTGCTGTT GTTCGTGTTC ACCTTCGTCG TCAATACCCT CGCCGAAGTG GTGCGTTGGC GACTCAAGCG TCGTTACCGG CGTTATGGAG CGCGCGCATG A
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Protein sequence | MTDPFVSPQR ANRRARQRLD RLASGAIAAS GIGVVAAVLA IGVYLTLAVL PLFEDASVEV DAEPSPATSG ASIVWLAEDG EYWLSANGRV FDAQGEVTTL TDEPRVTTAT EASETLPLAV GLDNGEVSVV PRDARGQPRW SQATRWRLFA SAPVAALHLQ STTHGWALAG RDADGQVAAL WHDGETARRI ALPDRAEHLA LGREGHLVMA QGTRLTSWKL SPDGSVAPSA RAETAAPITA LAFLQGDRTL VVGDAEGGLR RWRQRPDDQG WQAAETPYAA LGEAPIRRLL ALPRQRLWLA LDADGRLGLY QAMSGQRWQG VAPEASLPVT LSSDARGNRV RWLSETGRLY RLAVEAPHAA VSTATLWMPQ TYEGYASDEW RWAAAASGDA EPKYSLVPLA WGTLKAAAWA MVFAVPLALG AAVHSACYMS TRQRARLKPA IELMEALPGV VIGFVAGLLV APFVEQHLAG TLALFICVPL GSVACGWLWR RLPARWEARL PPVGVGVGLI VPLALLCWAA LSVSPWLEAW WFGGDLRAWM QQTLGWDYAQ RNALIVGMAM GLAVIPTLYS LAEEALSGVP RSLAEGSLAL GATRAQTLWR VQLPAAAPGI LAAVMIGAGR AVGETMIVLM ATGNTPLMSP SLFEGLRSLA ANLAIELPEA AVGGTHYRLL LLGALLLFVF TFVVNTLAEV VRWRLKRRYR RYGARA
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