Gene Csal_3267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3267 
Symbol 
ID4029016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3641917 
End bp3644037 
Gene Length2121 bp 
Protein Length706 aa 
Translation table11 
GC content70% 
IMG OID637968482 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_575310 
Protein GI92115382 
COG category[R] General function prediction only 
COG ID[COG4590] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACC CTTTCGTTTC TCCCCAGCGT GCCAATCGTC GCGCACGCCA GCGTCTCGAT 
CGCCTGGCGT CGGGCGCGAT CGCGGCCAGC GGCATCGGCG TGGTCGCGGC GGTGCTGGCC
ATCGGTGTCT ATCTGACGCT GGCCGTGTTG CCGTTGTTCG AGGATGCCTC GGTCGAGGTC
GATGCCGAGC CCTCGCCGGC CACGTCGGGA GCCTCCATCG TCTGGCTGGC GGAGGATGGC
GAATACTGGC TGAGCGCGAA TGGACGCGTG TTCGATGCCC AGGGCGAGGT GACGACGCTG
ACCGACGAGC CCCGCGTGAC GACGGCCACC GAGGCGAGCG AGACCCTGCC GCTGGCCGTG
GGCCTGGACA ATGGCGAGGT GAGCGTGGTG CCGCGCGATG CCCGGGGCCA GCCACGCTGG
TCGCAGGCCA CGCGCTGGCG GCTGTTTGCC TCGGCGCCGG TCGCCGCGCT GCACTTGCAG
TCCACGACGC ATGGCTGGGC GCTGGCCGGA CGCGATGCGG ACGGCCAGGT GGCGGCCTTG
TGGCATGACG GCGAGACGGC ACGGCGTATC GCCCTGCCGG ATCGGGCCGA ACATCTTGCC
CTGGGCCGCG AGGGGCATCT GGTCATGGCC CAGGGGACAC GCTTGACCTC GTGGAAGCTG
TCCCCGGACG GCAGCGTTGC GCCATCGGCA CGTGCCGAAA CGGCCGCGCC GATAACGGCC
CTGGCGTTCC TGCAGGGAGA CCGCACGCTG GTCGTCGGTG ACGCCGAGGG CGGTTTGCGG
CGTTGGCGGC AACGCCCGGA CGATCAAGGC TGGCAAGCGG CCGAGACGCC CTATGCCGCC
CTGGGCGAGG CACCGATACG CCGGCTGCTG GCCCTGCCGC GTCAACGCCT GTGGCTGGCA
CTGGATGCCG ACGGCCGGCT GGGACTCTAT CAGGCGATGA GCGGCCAGCG CTGGCAGGGC
GTGGCACCCG AGGCATCGCT TCCGGTCACC CTGTCGAGCG ACGCGCGCGG TAATCGGGTG
CGCTGGTTGA GCGAGACCGG ACGCCTTTAT CGGCTGGCCG TCGAGGCCCC GCACGCTGCC
GTGAGCACCG CCACGCTCTG GATGCCGCAG ACGTACGAGG GCTACGCCAG CGACGAGTGG
CGCTGGGCGG CGGCCGCCAG CGGCGACGCG GAGCCCAAGT ACAGCCTGGT GCCGCTGGCG
TGGGGCACCC TCAAGGCGGC AGCCTGGGCG ATGGTCTTCG CGGTACCGTT GGCCTTGGGC
GCGGCGGTGC ACAGTGCGTG TTACATGTCG ACGCGCCAGC GCGCACGCCT CAAGCCGGCC
ATCGAGTTGA TGGAGGCCCT GCCTGGCGTG GTCATCGGGT TCGTCGCGGG CTTGCTCGTG
GCCCCCTTCG TCGAGCAACA CCTTGCCGGC ACCCTGGCGC TTTTCATTTG CGTCCCGCTG
GGGAGCGTGG CGTGCGGCTG GTTGTGGCGG CGTCTGCCCG CGCGCTGGGA GGCGCGTTTG
CCGCCGGTGG GCGTCGGCGT GGGATTGATC GTGCCCCTGG CGCTGCTGTG CTGGGCGGCG
TTGAGTGTTT CGCCCTGGCT CGAGGCCTGG TGGTTCGGCG GTGACCTGCG AGCCTGGATG
CAGCAGACGC TGGGCTGGGA CTACGCGCAG CGCAATGCAC TGATCGTCGG CATGGCCATG
GGACTGGCCG TCATCCCGAC GCTCTACTCG CTGGCCGAGG AGGCGCTTTC CGGCGTTCCC
CGCTCGCTGG CGGAGGGATC CCTGGCGCTG GGGGCGACCC GGGCGCAGAC GTTATGGCGC
GTGCAGTTGC CCGCCGCCGC GCCGGGTATT CTCGCGGCGG TGATGATCGG CGCGGGGCGT
GCCGTGGGAG AAACCATGAT CGTGCTGATG GCCACCGGCA ATACGCCATT GATGTCGCCG
AGTCTCTTCG AGGGGCTGCG CTCGCTGGCC GCCAATCTGG CCATCGAATT GCCCGAAGCC
GCGGTGGGAG GCACGCATTA TCGCCTCTTG CTGCTCGGAG CGCTGCTGTT GTTCGTGTTC
ACCTTCGTCG TCAATACCCT CGCCGAAGTG GTGCGTTGGC GACTCAAGCG TCGTTACCGG
CGTTATGGAG CGCGCGCATG A
 
Protein sequence
MTDPFVSPQR ANRRARQRLD RLASGAIAAS GIGVVAAVLA IGVYLTLAVL PLFEDASVEV 
DAEPSPATSG ASIVWLAEDG EYWLSANGRV FDAQGEVTTL TDEPRVTTAT EASETLPLAV
GLDNGEVSVV PRDARGQPRW SQATRWRLFA SAPVAALHLQ STTHGWALAG RDADGQVAAL
WHDGETARRI ALPDRAEHLA LGREGHLVMA QGTRLTSWKL SPDGSVAPSA RAETAAPITA
LAFLQGDRTL VVGDAEGGLR RWRQRPDDQG WQAAETPYAA LGEAPIRRLL ALPRQRLWLA
LDADGRLGLY QAMSGQRWQG VAPEASLPVT LSSDARGNRV RWLSETGRLY RLAVEAPHAA
VSTATLWMPQ TYEGYASDEW RWAAAASGDA EPKYSLVPLA WGTLKAAAWA MVFAVPLALG
AAVHSACYMS TRQRARLKPA IELMEALPGV VIGFVAGLLV APFVEQHLAG TLALFICVPL
GSVACGWLWR RLPARWEARL PPVGVGVGLI VPLALLCWAA LSVSPWLEAW WFGGDLRAWM
QQTLGWDYAQ RNALIVGMAM GLAVIPTLYS LAEEALSGVP RSLAEGSLAL GATRAQTLWR
VQLPAAAPGI LAAVMIGAGR AVGETMIVLM ATGNTPLMSP SLFEGLRSLA ANLAIELPEA
AVGGTHYRLL LLGALLLFVF TFVVNTLAEV VRWRLKRRYR RYGARA