| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1357 |
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| Symbol | |
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| ID | 4277891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1613710 |
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| End bp | 1615965 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134132 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_750048 |
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| Protein GI | 114562535 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4590] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAGTC AGGTCAATAA ACCTGGTTCT GCGGAAAAAA GTCTACTCGT TGATAGACAT
GCAACCCGCA GAGCATTTAA GGATAAAGCA GCAGAGATTG GGGTAACCGT TGGTGGCACA
TTAGTGTTTG TCACCCTGTT ATTAATATTT TTCTATTTGC TGTATGTCAT CAAGCCCATT
TTTGATGGAG CGCATATAGA ACCTGTTACC AGTGTGAGTT ATCAACATAC TGATGCGAAA
ACCTTAACTG TTGGCAGTGA TGAACAAAAC GAAGTGCTTT ATCGAGTGAC CGAATCGGGT
GTCGTTGATT TTTATTCAGC CGCTAGCGGT GAATTGATTT CATCTTTTAA GCCAAAAATC
CCTGAAGGCA CAACGGTAAC CAGCAGCGCA AAATCAAGCC CAAGCGAGCA ACGTTTTGCA
TTAGGGCTGA GTAACGGCCA AGTGATTGTT GTCGGCATTG AGTTTGGATT AACTTACCCA
GACAATAAAC GTGTCATTAC ACCCTCTTTG CGTTATCCGA TGGGTGAAAC GCCTTTGACG
ATTAATAGTG ACGGTGCGGT TTATAATCTG GTGTTTGATT TTAGCGACAG TCGCATGAGC
TTTGCATACC AAGACGCCAA AGGTGCTTGG AAGCTTAATC GCCAAGAAGG CGAAGAAAAC
ATGATGACTG AAGAAGTTGA ATGGTCATCT GTTGAAGTAT TTATAAGCGA TGCTCCTAGT
AATGTTATAT CAGCGATAAT GACTCCTGAT CACCGTCAGC TTATTTTGAG TGCTAATAAT
AAACTGTTTA TTTATAACAC TCGCGATGCC GACTCTGTTG AGTTACTTCA AGTTGTCGAT
GTTCAAAAAG TAAATGCTGA AGTTAAGCAA GTAAATTTAC TTGCCGGTGC CAGCTCTATT
TTGGTGAGTT ATGACAGCGG TATAGTGAGT CAGTACTTCC AAGTTAATAG CGAAAAAGGT
CGTTTATATC AGCAGATTCG TGAGTTTGAT GATCTTGCTC CTGTTAGTGT AATGGCAACA
GAGTTTTATC GTAAAAGCTT TGCCGTGCTG AGTGCAGAAG GCGAGTTAAC ACTGCTTTAT
ACGACCAGTG AACGTCAGTT ATTCGACGAG AAATTTCAGT TAACCAACCC CGGTAAAATG
GGCTTTAGCC CGCGTTCAAA CGCCTTGGTG ATTGAAGCCG ATAACAAACT TAACCTGTTC
TCTGTTGAAA ATGATCATCC AGAAATATCC TGGAGCGCAC TGTGGGAAAA AGTGTGGTAC
GAAGGTTACC CTGAACCACA ATATGTGTGG CAGTCGACTT CAGGTTCTGA CGACTTTGAA
GCCAAATTAA GCTTAATGCC ACTGGCATTT GGCACCATGA AAGCGGCATT TTACGCCATG
CTATTTGCCG CGCCATTGGC GATTGCTGGG GCGATTTATA CCGCTTACTT CATGACACCT
AAAGTGCGTA ATGTCGTTAA ACCTACCATT GAAATTATGG AAGCATTACC GACAGTAATT
TTGGGTTTCT TGGCCGGCTT ATGGTTAGCG CCACTGATTG AAGATCATTT GCCCGGTATT
GTGGTGTTAT TGATGTTATT GCCCACATCA ATACTTGCCA CTGCATTTGC CTGGAGTAAA
TTGCCTGAAA AATGGAAGCA TCGTCTACCA GAAACCTACC AAGAACTAAT GCTATTACCG
GTGATTATAT TTATTGGTTG GTTCTCTTTT GAGATAAGCC CAGTGATTGA AGTGGCATTA
TTTGATGGCA ATACTCGTCA ATTTATTACT AATGATTTAG GTATCACTTT TGACCAACGT
AATGCGCTGG TTGTGGGTAT TGCCATGGGT TTTGCGGTAA TTCCAACCAT ATTCTCAATT
GCTGAAGATG CGATTTTCTC TGTGCCGCGT CATTTATCAA ACGGCAGTTT GGCACTGGGT
GCAACAAACT GGCAAACCTT GACTAAGGTG GTATTACTTA CCGCCAGCCC GGGTATTTTT
TCGGCCATTA TGATGGGCTT AGGCCGTGCA GTGGGTGAAA CCATGATTGT GTTAATGGCA
ACCGGTAATA CTGCAATCCT TGAGTGGAGT GTATTTGAAG GTATGCGTAC CTTAGCGGCA
AACATTGCTG TAGAAATGCC TGAGTCGGCC ATTGGCAGTA CGCATTATCG CGTATTGTTC
TTAGCTGCCT TTGTATTGTT CGTATTCACC TTCTTCTTTA ATACCATTGC TGAAGTTGTT
CGCCAACGTT TACGCGAACG TTATAGCTCA CTGTAA
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| Protein sequence | MESQVNKPGS AEKSLLVDRH ATRRAFKDKA AEIGVTVGGT LVFVTLLLIF FYLLYVIKPI
FDGAHIEPVT SVSYQHTDAK TLTVGSDEQN EVLYRVTESG VVDFYSAASG ELISSFKPKI
PEGTTVTSSA KSSPSEQRFA LGLSNGQVIV VGIEFGLTYP DNKRVITPSL RYPMGETPLT
INSDGAVYNL VFDFSDSRMS FAYQDAKGAW KLNRQEGEEN MMTEEVEWSS VEVFISDAPS
NVISAIMTPD HRQLILSANN KLFIYNTRDA DSVELLQVVD VQKVNAEVKQ VNLLAGASSI
LVSYDSGIVS QYFQVNSEKG RLYQQIREFD DLAPVSVMAT EFYRKSFAVL SAEGELTLLY
TTSERQLFDE KFQLTNPGKM GFSPRSNALV IEADNKLNLF SVENDHPEIS WSALWEKVWY
EGYPEPQYVW QSTSGSDDFE AKLSLMPLAF GTMKAAFYAM LFAAPLAIAG AIYTAYFMTP
KVRNVVKPTI EIMEALPTVI LGFLAGLWLA PLIEDHLPGI VVLLMLLPTS ILATAFAWSK
LPEKWKHRLP ETYQELMLLP VIIFIGWFSF EISPVIEVAL FDGNTRQFIT NDLGITFDQR
NALVVGIAMG FAVIPTIFSI AEDAIFSVPR HLSNGSLALG ATNWQTLTKV VLLTASPGIF
SAIMMGLGRA VGETMIVLMA TGNTAILEWS VFEGMRTLAA NIAVEMPESA IGSTHYRVLF
LAAFVLFVFT FFFNTIAEVV RQRLRERYSS L
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