| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0619 |
|---|
| Symbol | |
|---|
| ID | 6368262 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 619592 |
|---|
| End bp | 621517 |
|---|
| Gene Length | 1926 bp |
|---|
| Protein Length | 641 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642676010 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001950865 |
|---|
| Protein GI | 189423688 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4590] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCCT CAATTGTAGA TAAATCCCGT CGTAATGACC GTCTGGCCGC CTGGCTGATC
AAGGCCGGCG GTCTGTTTGT GATCGTTGCC GTCATCGGCA TTCTGATGCT GATCGCCCGG
GTCGCCCTGC CGCTTTTTTA TGCGCCTTCT GCCGACAGGC TGCCCGAGGT CTCTGCCGAA
CTGCAGGCGC TGCTTGCAAC TGACGGCTCC GGTACCAGCC AGACCCGTGA GCTGGGTGAA
AGCGGTTCCC TTACGATAAC GCTGCTGCCG GGCAACCGGT TTGCCGTCCA GCGCCGTAAT
GTTGAAAAAG ATCTGCTGGG GAATGAAAAA ACGACGGAAC AGAGCTACAA GCTGTCTGAC
CCGTTGCCCG GTACGATCTC GACCTTCTGG CTGGGGCGTA AGGGACAGAA CCTGTACGCA
GGCACTGATA ACGGCTGGCT GGTGCGCTGG GATCTGTCCG GCGACGGTGA AGGACGACTG
ATTGAAACGG TGGAGGCATT TAAGGATCAT CGCCGCATCA CGGCCCTGGC AACGGTGCTG
GGCGATAACT CGCTGGCAGT GGGTGATGCC AGGGGAGAGA TCACAACCTG GATGCCGATT
GCCAAGCCGG GCAGCGGTGA AGACAAACAG CTGGCGCTGA TCCACCACCT GCCGGGGTTT
GCCCAGCCGG TCAGCCGCTT GCTGGCCTCT CCGCGTGACA AGTCTCTGGC TGCCTTTGAT
GCCGGCGGGA CGATCAGGCT GGTGCATATG ACCAGCGAAC GGCTGCTGCT GGAACTGCAG
GCCGGGCTGC CGGTCACTGC GGCAGCCTTT GCCGACCGTG GCCGCCAACT GGTGGTGGCT
GGTGCCGACG GCAGGAGCGT GGCCTGGAAA CTTGATATCC CGCACCCTGA GATATCGTTT
TCGACCCTGT TCGGCAAGGT CTGGTACGAA GGCTACAATA AACCTGAATA TGTCTGGCAG
TCCTCGGCAG CCACCGACGA CTTTGAACCC AAGATCTCTT TGATGCCGCT GATCTTCGGC
ACCTTCAAGG CCACCCTGTT TGCCATGCTG TTTGCGGTGC CGCTGGCCTT GCTGGGGGCG
ATCTATACCA GCCAGTTCAT GGCCCCGTCC CTGAAGGGGC GGATCAAGCC GGCGGTTGAG
ATCATGGCGG CGGTGCCGTC AGTGGTGGTC GGCTTCCTGG CCGGACTCTG GCTGGCCCCG
CTGATGGACA AACACCTGCT GGCGCTTTTT CTGGCCACGA TCATGGTGCC GGCCATGTTG
CTGGCTGCCA TCCTGGTCTG GCGTCCCCTG GCTGAAAAGA CCGAGATCGG CCGCAATCTG
AAGGGATACG AGTTTCTGGG GCTGCTGCCG GTGGTGGTGC TGGCGCTCTG GCTTTCAGGA
CAACTGGCAG TGCCCCTTGA GGCGACCTTT TTCGGCGCCG ATCTCAAGCA GTGGCTCTAT
TCGGCGCTGG GGGTGCGCTA TGACCAGCGC AACAGCATCA TTATTGCCAT TGCTCTGGGA
TTTGCCGTGA TCCCGATCAT CTTTACGATT GCCGAGGATG CCCTCTCCAA CGTGCCCCGC
AACCTGTCCG CCGCCTCTCT GGCCCTGGGG GCCAGCCGCT GGCAGACTGC CTGGAGAGTG
GTGCTTCCTT CAGCCCTGCC GGGCGTCTTT TCCGCGATCA TGATCGGCTT TGGCCGTGCC
GTCGGTGAGA CCATGATCGT GTTGATGGCA ACCGGCAATA CCCCGATCAT GAGCTGGTCC
CTGTTTAACG GCCTGCGTTC GCTCTCGGCC AACATCGCGG TGGAGATCCC CGAGGCACCT
TTGAACGGTA CCCTCTACCG GACCCTGTTT CTCTCAGCAG TGCTGCTGTT TGTGCTGACC
TTTATCATCA ACACCGCGGC CGAACTGCTG CGGCAACGCT TCCGTAAAAA GTACGGACGG
TATTGA
|
|---|
| Protein sequence | MASSIVDKSR RNDRLAAWLI KAGGLFVIVA VIGILMLIAR VALPLFYAPS ADRLPEVSAE
LQALLATDGS GTSQTRELGE SGSLTITLLP GNRFAVQRRN VEKDLLGNEK TTEQSYKLSD
PLPGTISTFW LGRKGQNLYA GTDNGWLVRW DLSGDGEGRL IETVEAFKDH RRITALATVL
GDNSLAVGDA RGEITTWMPI AKPGSGEDKQ LALIHHLPGF AQPVSRLLAS PRDKSLAAFD
AGGTIRLVHM TSERLLLELQ AGLPVTAAAF ADRGRQLVVA GADGRSVAWK LDIPHPEISF
STLFGKVWYE GYNKPEYVWQ SSAATDDFEP KISLMPLIFG TFKATLFAML FAVPLALLGA
IYTSQFMAPS LKGRIKPAVE IMAAVPSVVV GFLAGLWLAP LMDKHLLALF LATIMVPAML
LAAILVWRPL AEKTEIGRNL KGYEFLGLLP VVVLALWLSG QLAVPLEATF FGADLKQWLY
SALGVRYDQR NSIIIAIALG FAVIPIIFTI AEDALSNVPR NLSAASLALG ASRWQTAWRV
VLPSALPGVF SAIMIGFGRA VGETMIVLMA TGNTPIMSWS LFNGLRSLSA NIAVEIPEAP
LNGTLYRTLF LSAVLLFVLT FIINTAAELL RQRFRKKYGR Y
|
|---|
| |