| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3642 |
|---|
| Symbol | pstC |
|---|
| ID | 3522268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 3783458 |
|---|
| End bp | 3785794 |
|---|
| Gene Length | 2337 bp |
|---|
| Protein Length | 778 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637286090 |
|---|
| Product | phosphate ABC transporter, permease protein |
|---|
| Protein accession | YP_270310 |
|---|
| Protein GI | 71281796 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4590] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCAAGTC TTATTAGTTC GAACCGAAGC CGTGGGGTTA AAAATTCATT GGCAAAATGG
TTAATAACCC TCGGTGGTAT TAGCGTTTTA TTTACCCTAG TGCTGATTTT TTTGTATTTA
CTTTACGTAG TAAAACCTAT TTTTGACTCT GCTAAAATTG AGCCAAAGGT TAGTATTAGT
CTAGACTTAA CAAGTAATGA AAAAGTGTTA AGTACTGGCG TTGATGAGTT ACAAGAAGTG
GCTTATGAAA TTACAGAAGC TGGTAACATT GATTTCTATT ATTTAAAAGC CAGCGCCTCT
GAATCAGACA ACCAGTTTGC TGTTGGTGAT AATGCGCTTT CTATGTCTTT ATTTTCAAGT
GAAGACTTCA ATCAAGAACA AGTGGTTAAT GTAGTTAATT CTTTTTCAGC GAATAAATTA
CTTCATACCA TCAAGGGTAA AACGTTATTA ATTCAGCCAA GCTTTTATGC TAAATACGCT
AATGATACCC GTGAAATAAT CCCTCAAGTA AATTATCCTC TCGGTCAAAA TTCACTAGTT
ATTGATGAAC AACAAACACC GCTTTCTCAA TTAGCCTTTG CAATGGATGA TGAAAGAATT
GTTTTTGTTG CTTTTACTGA AGATAAACGT TTAATAAAAA CAAGCTTTAT TGCTGAAGAT
GACTTCAGTT CTTCTAGTGA TGGTGATGAT GTTGAATACG AAACTATTTT TCAACAAATT
GAGCTTACTG ATGATGTCAT TGATGAAATA AAAGTGACAC CTGACTTAAG TTTAGCTTTT
ATTCGAAGTG CTTCAACGGT GTATGTATAT TCGCTAAATG ATGACGAAGA AGTCAGCCTT
AAAGCAACAA TTACACCGAC TCTCGATAAT AGCAATACTT ACCTTACCTC AATGGCACTG
CTTTCAGGGA GTAGTTCTGT TTTATTAGGT GATAGTAGTG GTCGAATCAG TCAGTGGTTT
GAAGTCGCAA CGGAATCAGG TCGCCAGTTT AAGCAAATTC GAAGCTTCAA CGCTAATGAT
GGCGAAGCGA GTTATGACAA AAACAACAAA ACATCAAGTG CGATAACCGC TATTTATACT
GAGCAATACA GAAAGAGTTT TTACACCATG ACCAATTCAG GTATGGTTAA TGTTTTCTAT
ACCACCAGCT CAGCACATCT TTGGCAAGGC AAACTTGCCT CAACTCAACC CGAAGCATTT
TCGATAGCGC CTCGTGCTAA TGGTTTGATT ATTATTGGTA ATGACCCTCT TGATGCTTCT
AATAAAAGTT TACAGGCTTT TAGTGTTCAT AATGAGCATC CAGAAGTTAC TTGGCAAGCG
CTATGGCAGG AGGTTTGGTA TGAAGGTTAC CCTGAGCCAG ACTATATCTG GCAATCAACA
TCAGGCTCTG ATGACTTTGA AGGTAAGTTT TCTCTAGTAC CTATTTCTTT TGGTACTATT
AAAGCGGCTT TATATGCGAT GTTATTTGCA GTACCTATTG CCTTAACTGC TGCGATATAT
ACCGCCTACT TTATGACACC GGGAATGCGT AAAAAAGTTA AACCGACCAT TGAAATGATG
GAAGCATTAC CTACCGTTAT TTTAGGGTTT TTAGCAGGTT TATGGTTAGC GCCGTTAATG
GAAGAATATT TACCAGCAAT ATTCCTGTTA TTTATTTTCT TACCTTTAGC AACACTAATC
ACTGCGTTTT CTTGGCATAA ATTACCAAAC CAGCTCAAAG ACAAACTGCC AGAAACATTA
GCACCCATTT TGTTAATTCC TGTGATAATA CTAGCCACCT ATGCGGCCTT TTCTTTATCA
CCACTGCTTG AAAACAGTTT CTTTAATGGT GATATGCGCC AATACCTAAC CAATGACCTA
GGTATCAACT TTGATCAACG TAACGCTCTA GTTGTTGGTA TTGCGATGGG ATTTGCTGTT
ATACCTACTA TTTTCTCTAT GGCTGAAGAT GCTATTTTCA GTGTGCCAGG TCATTTAACA
AGCGGTTCAT TAGCATTAGG GGCAACACAA TGGCAAACAT TAATCGGTGT GGTACTTCTA
ACTGCCAGTC CCGGCATATT TTCTGCTGTG ATGATGGGCC TTGGTCGTGC AGTTGGTGAA
ACAATGATTG TCTTGATGGC AACGGGTAAT ACGCCGATTT TAGATTGGAG TATCTTCCAA
GGTATGAGAA CACTTGCAGC AAACATTGCG GTAGAAATGC CCGAATCTGA AGTAGGCAGT
TCCCATTACC GAATATTATT CTTGGCAGCA TTTGTACTCT TTATCTTCAC CTTTATTTTC
AATACCGCAG CAGAATTTGT TCGTCAACGA TTACGCGAAA AATACAGCTC AATGTAG
|
|---|
| Protein sequence | MASLISSNRS RGVKNSLAKW LITLGGISVL FTLVLIFLYL LYVVKPIFDS AKIEPKVSIS
LDLTSNEKVL STGVDELQEV AYEITEAGNI DFYYLKASAS ESDNQFAVGD NALSMSLFSS
EDFNQEQVVN VVNSFSANKL LHTIKGKTLL IQPSFYAKYA NDTREIIPQV NYPLGQNSLV
IDEQQTPLSQ LAFAMDDERI VFVAFTEDKR LIKTSFIAED DFSSSSDGDD VEYETIFQQI
ELTDDVIDEI KVTPDLSLAF IRSASTVYVY SLNDDEEVSL KATITPTLDN SNTYLTSMAL
LSGSSSVLLG DSSGRISQWF EVATESGRQF KQIRSFNAND GEASYDKNNK TSSAITAIYT
EQYRKSFYTM TNSGMVNVFY TTSSAHLWQG KLASTQPEAF SIAPRANGLI IIGNDPLDAS
NKSLQAFSVH NEHPEVTWQA LWQEVWYEGY PEPDYIWQST SGSDDFEGKF SLVPISFGTI
KAALYAMLFA VPIALTAAIY TAYFMTPGMR KKVKPTIEMM EALPTVILGF LAGLWLAPLM
EEYLPAIFLL FIFLPLATLI TAFSWHKLPN QLKDKLPETL APILLIPVII LATYAAFSLS
PLLENSFFNG DMRQYLTNDL GINFDQRNAL VVGIAMGFAV IPTIFSMAED AIFSVPGHLT
SGSLALGATQ WQTLIGVVLL TASPGIFSAV MMGLGRAVGE TMIVLMATGN TPILDWSIFQ
GMRTLAANIA VEMPESEVGS SHYRILFLAA FVLFIFTFIF NTAAEFVRQR LREKYSSM
|
|---|
| |