| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_6147 |
|---|
| Symbol | pstC |
|---|
| ID | 5359005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 6349648 |
|---|
| End bp | 6351933 |
|---|
| Gene Length | 2286 bp |
|---|
| Protein Length | 761 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640815191 |
|---|
| Product | membrane protein component of ABC phosphate transporter |
|---|
| Protein accession | YP_001351463 |
|---|
| Protein GI | 152988206 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4590] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.297705 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACA TGGCCAACTC CCCGATGAAT TCCTCCCTTG CTCCCGAGCG GATTGACTTC
AATACGCCAG CCCTGCAACG CAAGCGCCGC CTCCGTGCCC TCAAGGACCG CCTGACCCGC
TGGTACGTGC TGGTCGGCGG CCTCGCCGTG CTGGCGGCTA TCACCCTGAT CTTCTTCTAC
CTGGCCTACG TCGTGCTTCC GCTCTTCCGC GGCGCCGACC TGGAGACCCG TGAAGCACTG
ACCCCGGCCT GGATGCAGCA GGCCCAGGCG CCCCTGTTGC TCAGCATCGA AGAGCAGAAC
CAGGTGGCCA TGCGTGTCGG CAGCCAGGGC GAGATCCTTT TCTTCAACGC CAAGACCGGC
GTCGAGCTGA AGCGCGTCGC GCTGCCGCTG CCGGCGGGCA GCGAAATCCG TTCGATCGCC
CAGGACCAGC CGGGCAGCCC GACGGTCGCC CTGGGCCTGT CCAACGGCCA GGTGCTGGTG
TTCCAGCACA CCTACAAGGT CACCTACCCG GACAACAAGA AGACCATCAC CCCGGAGATC
GCCTTCCCCT ATGGCGAAAC CCCGATCAGC CTGGATCCCC AGGCCCGTCC GCTTGATCAC
GTGAGCATCA ATGCCGGCGA CGACAGCCTG CTGCTGGCCG GTTCCGTCGA CAGGCAACTG
CTGTTGCTGA GCATGACCCG CGAGGAGAAC ATGCTGACCG GCGAGAGCAC CCTCGACCAG
GAGCGCATCG AACTCCCGCA GATCGCCGAG CCGGTCAAGG CCATCTACCT CGATCCGCGC
AAGCAGTGGC TGTACGTGAT CAACGGACGC GCCACCGCCG ACGTGTTCGA CCTGCACAGC
CGCCAGTTGA ACGGCCGCTA CAAGCTGCTG GAAGATCCCG GCGCCGCCGT GACCGCGAGC
ACCCAGCTGC TCGGCGGCAT CTCGCTGCTG GTGGGCGACT CCAAGGGCGG CATCGCCCAG
TGGTTCATGG CCCGCGATAC CGACGGCGAG CCGCGCCTGT CGCATGTCCG CGACTTCAAG
CTGGACGGCG CGCCGATCAG CGCGATCGCT CCGGAGCAGC GGCGCAAGGG CTTCATCGCG
CTGGACGAGA AGGGCAACCT CGGCGTCTTC CACAGCACCG CGCACCGTAC CCTGCTGGTC
CAGCCGGTGG CCGACTCCTC CGGCGTGATC AGCCTGTCGC CAAGGGCCAA CCGCCTGCTG
CTGGAACAGG GCGGCAAGCT CCACCGCTTC ACCCTGGACA ACCCGCACCC GGAAATCTCC
TGGAGCGCAC TGTGGGGCAA GGTCTGGTAC GAGAGCTACG ACAAGCCGGC CTATGTCTGG
CAGTCCACCG CCGCGACCAC CGACTTCGAA CCCAAGCTGA GCCTCTCGCC GCTGACCTTC
GGCACCCTCA AGGCGGCCTT CTACGCGATG ATCCTGGCCG CTCCGCTGGC CATCGCCGCC
GCTGTCTACA CCGCCTATTT CATGGCCCCG GCGATGCGCC GCAAGGTCAA GCCGGTGATC
GAGCTGATGG AAGCGCTGCC GACGGTGATC CTCGGCTTCT TCGCCGGCCT GTTCCTGGCG
CCCTATGTCG AAGGCCATCT GCCGGGCGTG TTCAGCCTGC TGTTGCTGAC GCCGCTGGGC
ATCCTCCTCG CCGGCCTGCT CTGGAGCCGC CTGCCCGAGC GTATCCGCCT GAGCCTGCCG
GCCGGCTGGG AAGCCGCGCT GCTGATCCCG GTGGTCATCG CCGTCGGCGC CTTCGCCCTG
TGGCTGAGCC CGCATCTGGA GACCACCTTC TTCGGCGGGG ACATGCGCCT GTGGCTGAGC
CACGACCTGG GCATTACCTA CGACCAGCGC AACGCCCTGA TCGTCGGCCT GGCGATGGGC
TTCGCGGTGA TCCCGAACAT CTTCTCGATC GCCGAGGATG CCATCTTCAG CGTGCCGCGC
AGCCTCACCT ATGGCTCCCT GGCACTCGGC GCCACGCCCT GGCAGACGCT GACCCGCGTG
GTGATCCTGA CCGCCAGCCC GGGCATCTTC TCGGCGCTGA TGATCGGCAT GGGGCGCGCC
GTCGGCGAGA CCATGATCGT GCTGATGGCG ACCGGCAATA CCCCGGTGAT GGAACTGAAC
ATCTTCGAAG GCATGCGCAC CCTGGCGGCC AACGTCGCGG TGGAAATGCC CGAGTCGGAG
GTCGGCGGCA GCCACTACCG CGTGCTGTTC CTCTCGGCGC TGGTACTGCT GACGTTCACC
TTCGTGATGA ACACCCTGGC AGAGCTGATC CGTCAGCGTC TGCGCAAGAA ATACGCGTCG
TTGTAA
|
|---|
| Protein sequence | MNDMANSPMN SSLAPERIDF NTPALQRKRR LRALKDRLTR WYVLVGGLAV LAAITLIFFY
LAYVVLPLFR GADLETREAL TPAWMQQAQA PLLLSIEEQN QVAMRVGSQG EILFFNAKTG
VELKRVALPL PAGSEIRSIA QDQPGSPTVA LGLSNGQVLV FQHTYKVTYP DNKKTITPEI
AFPYGETPIS LDPQARPLDH VSINAGDDSL LLAGSVDRQL LLLSMTREEN MLTGESTLDQ
ERIELPQIAE PVKAIYLDPR KQWLYVINGR ATADVFDLHS RQLNGRYKLL EDPGAAVTAS
TQLLGGISLL VGDSKGGIAQ WFMARDTDGE PRLSHVRDFK LDGAPISAIA PEQRRKGFIA
LDEKGNLGVF HSTAHRTLLV QPVADSSGVI SLSPRANRLL LEQGGKLHRF TLDNPHPEIS
WSALWGKVWY ESYDKPAYVW QSTAATTDFE PKLSLSPLTF GTLKAAFYAM ILAAPLAIAA
AVYTAYFMAP AMRRKVKPVI ELMEALPTVI LGFFAGLFLA PYVEGHLPGV FSLLLLTPLG
ILLAGLLWSR LPERIRLSLP AGWEAALLIP VVIAVGAFAL WLSPHLETTF FGGDMRLWLS
HDLGITYDQR NALIVGLAMG FAVIPNIFSI AEDAIFSVPR SLTYGSLALG ATPWQTLTRV
VILTASPGIF SALMIGMGRA VGETMIVLMA TGNTPVMELN IFEGMRTLAA NVAVEMPESE
VGGSHYRVLF LSALVLLTFT FVMNTLAELI RQRLRKKYAS L
|
|---|
| |